CX287064
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: RUBB_BRANA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.453e-42 Identity = 95/141 (67.38%), Postives = 105/141 (74.47%), Query Frame = 1 Query: 124 MASTFTAMSSISSMIAPNGRMTDXXXXXXXXXXXXXXXXXXXXFGRRQSV--ALRRARTPKIYAAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQA 540 MASTFTA SSI SM+APN TD FGRRQ+V LRR+ + AAK+LHFNKDG ++KLQ GVNKLADLVGVTLGPKGRNVVLESKYG+P+IVNDGVTVA+EVELEDPVENIGAKLVRQA Sbjct: 1 MASTFTATSSIGSMVAPNAHKTDKKLMNKLSSSS---------FGRRQNVFPKLRRSSPAVVCAAKELHFNKDGTTIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQA 132
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: RUBB_ARATH (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Arabidopsis thaliana GN=At1g55490 PE=1 SV=3) HSP 1 Score: 170.244 bits (430), Expect = 5.465e-42 Identity = 94/141 (66.67%), Postives = 105/141 (74.47%), Query Frame = 1 Query: 124 MASTFTAMSSISSMIAPNGRMTDXXXXXXXXXXXXXXXXXXXXFGRRQSVALRRARTPK--IYAAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQA 540 MASTFTA SSI SM+APNG +D FGRRQSV R R+ + AAK+LHFNKDG +++LQ GVNKLADLVGVTLGPKGRNVVLESKYG+P+IVNDGVTVA+EVELEDPVENIGAKLVRQA Sbjct: 1 MASTFTATSSIGSMVAPNGHKSDKKLISKLSSSS---------FGRRQSVCPRPRRSSSAIVCAAKELHFNKDGTTIRRLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQA 132
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: RUBB_PEA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 1.304e-35 Identity = 77/88 (87.50%), Postives = 82/88 (93.18%), Query Frame = 1 Query: 280 RRARTPKIYA-AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQA 540 R+ R K+ A AK+LHFNKDG A+KKLQNGVNKLADLVGVTLGPKGRNVVLESKYG+PKIVNDGVTVAKEVELEDPVENIGAKLVRQA Sbjct: 39 RKNRNVKVSAMAKELHFNKDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQA 126
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH60_CALS8 (60 kDa chaperonin OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=groL PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.282e-22 Identity = 51/77 (66.23%), Postives = 66/77 (85.71%), Query Frame = 1 Query: 307 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQ 537 AAK + F+++ A + L+ GVNKLAD V VTLGPKGRNVVLE K+G+P+IVNDGVT+AKE+ELEDP EN+GA++VR+ Sbjct: 2 AAKMILFDEE--ARRALERGVNKLADTVKVTLGPKGRNVVLEKKFGSPQIVNDGVTIAKEIELEDPFENMGAQIVRE 76
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH60_ANATD (60 kDa chaperonin OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=groL PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.282e-22 Identity = 51/77 (66.23%), Postives = 66/77 (85.71%), Query Frame = 1 Query: 307 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQ 537 AAK + F+++ A + L+ GVNKLAD V VTLGPKGRNVVLE K+G+P+IVNDGVT+AKE+ELEDP EN+GA++VR+ Sbjct: 2 AAKMILFDEE--ARRALERGVNKLADTVKVTLGPKGRNVVLEKKFGSPQIVNDGVTIAKEIELEDPFENMGAQIVRE 76
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH602_GLOVI (60 kDa chaperonin 2 OS=Gloeobacter violaceus GN=groL2 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.118e-21 Identity = 48/68 (70.59%), Postives = 58/68 (85.29%), Query Frame = 1 Query: 334 DGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQ 537 D A + L+ GVN LAD V VTLGPKGRNVVLE K+GAP+IVNDGVT+AKE+ELEDP+EN GA+L+R+ Sbjct: 8 DETARRALERGVNALADAVRVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELEDPLENTGAQLIRE 75
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH60_LACDB (60 kDa chaperonin OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=groL PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.072e-21 Identity = 52/77 (67.53%), Postives = 60/77 (77.92%), Query Frame = 1 Query: 310 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQA 540 AKD+ F++D A + L NGVNKLA+ V TLGPKGRNVVLE YGAP I NDGVT+AK +ELED ENIGAKLV +A Sbjct: 2 AKDIKFSED--ARRSLLNGVNKLANTVKTTLGPKGRNVVLEQSYGAPTITNDGVTIAKAIELEDHYENIGAKLVAEA 76
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH60_LACDA (60 kDa chaperonin OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=groL PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.072e-21 Identity = 52/77 (67.53%), Postives = 60/77 (77.92%), Query Frame = 1 Query: 310 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQA 540 AKD+ F++D A + L NGVNKLA+ V TLGPKGRNVVLE YGAP I NDGVT+AK +ELED ENIGAKLV +A Sbjct: 2 AKDIKFSED--ARRSLLNGVNKLANTVKTTLGPKGRNVVLEQSYGAPTITNDGVTIAKAIELEDHYENIGAKLVAEA 76
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH60_CHLT3 (60 kDa chaperonin OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=groL PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.072e-21 Identity = 48/77 (62.34%), Postives = 63/77 (81.82%), Query Frame = 1 Query: 307 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQ 537 AAK++HF+ +G L+ GV+KLAD V VTLGP GRNV+++ K+GAP + DGVTVAKEVELEDPVEN+GA++VR+ Sbjct: 2 AAKEIHFDAEG--RNALKRGVDKLADAVKVTLGPAGRNVIIDKKFGAPTVTKDGVTVAKEVELEDPVENMGAQMVRE 76
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH60_FUSNP (60 kDa chaperonin OS=Fusobacterium nucleatum subsp. polymorphum GN=groL PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 5.318e-21 Identity = 51/76 (67.11%), Postives = 61/76 (80.26%), Query Frame = 1 Query: 310 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQ 537 AK ++FN + A KKL+ GVN LAD V VTLGP+GRNVVLE YGAP I NDGVT+AKE+ELEDP EN+GA LV++ Sbjct: 2 AKIINFNDE--ARKKLEIGVNTLADAVKVTLGPRGRNVVLEKSYGAPLITNDGVTIAKEIELEDPFENMGAALVKE 75 The following BLAST results are available for this feature:
BLAST of CX287064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287064 ID=CX287064; Name=CX287064; organism=Citrus clementina; type=EST; length=540bpback to top |