CX287064
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH60_PELPB (60 kDa chaperonin OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=groL PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.387e-18 Identity = 45/76 (59.21%), Postives = 59/76 (77.63%), Query Frame = 1 Query: 310 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQ 537 AKD+ F+ D A KL+ GV+KLA+ V VTLGP GRNV+++ K+GAP DGVTVAKE+EL DP EN+GA++VR+ Sbjct: 3 AKDILFDSDARA--KLKVGVDKLANAVKVTLGPAGRNVLIDKKFGAPTSTKDGVTVAKEIELSDPFENMGAQMVRE 76
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH60_PASMU (60 kDa chaperonin OS=Pasteurella multocida GN=groL PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 9.387e-18 Identity = 46/77 (59.74%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 307 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQ 537 AAKD+ F D A K+ GVN LAD V VTLGPKGRNVVL+ +GAP I DGV+VA+E+ELED EN+GA++V++ Sbjct: 2 AAKDVKFGND--ARVKMLAGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKE 76
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH60_OCHA4 (60 kDa chaperonin OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=groL PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.387e-18 Identity = 44/77 (57.14%), Postives = 60/77 (77.92%), Query Frame = 1 Query: 307 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQ 537 AAKD+ F + A +K+ GV+ LAD V VTLGPKGRNVV++ +GAP+I DGV+VAKE+ELED EN+GA+++R+ Sbjct: 2 AAKDVKFGRS--AREKMLRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMLRE 76
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH60_HAEDU (60 kDa chaperonin OS=Haemophilus ducreyi GN=groL PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 9.387e-18 Identity = 46/77 (59.74%), Postives = 57/77 (74.03%), Query Frame = 1 Query: 307 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQ 537 A KD+ F D A K+ GVN LAD V VTLGPKGRNVVL+ YGAP I DGV+VA+E+ELED EN+GA++V++ Sbjct: 2 AIKDVKFGND--ARVKMLKGVNILADAVKVTLGPKGRNVVLDKAYGAPTITKDGVSVAREIELEDKFENMGAQMVKE 76
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH60_GEOSM (60 kDa chaperonin OS=Geobacter sp. (strain M21) GN=groL PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.387e-18 Identity = 47/77 (61.04%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 307 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQ 537 AAK + F+++ A + GVN LAD V VTLGPKGRNVV+E YGAP I DGVTVAKE+ELED EN+GA+LV++ Sbjct: 2 AAKLIKFDQE--ARNCILKGVNTLADAVKVTLGPKGRNVVIEKSYGAPLITKDGVTVAKEIELEDKFENMGAQLVKE 76
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH60_EUGGR (Chaperonin CPN60, mitochondrial OS=Euglena gracilis GN=HSP60 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.387e-18 Identity = 50/92 (54.35%), Postives = 61/92 (66.30%), Query Frame = 1 Query: 262 RQSVALRRARTPKIYAAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQ 537 R V RR + K KD+ F D A K+ GVN+L+ V VTLGPKGRNVV+E +GAPKI DGVTVAK +E +D EN+GA+LVRQ Sbjct: 3 RAGVLARRGYSSK---GKDILFGVD--ARVKMLAGVNRLSQAVSVTLGPKGRNVVIEQPFGAPKITKDGVTVAKAIEFKDSFENLGAQLVRQ 89
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH60_EDWI9 (60 kDa chaperonin OS=Edwardsiella ictaluri (strain 93-146) GN=groL PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.387e-18 Identity = 45/77 (58.44%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 307 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQ 537 AAKD+ F D A K+ GVN LAD V VTLGPKGRNVVL+ +G+P I DGV+VA+E+ELED EN+GA++V++ Sbjct: 2 AAKDVKFGND--ARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGSPAITKDGVSVAREIELEDKFENMGAQMVKE 76
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH60_DEIRA (60 kDa chaperonin OS=Deinococcus radiodurans GN=groL PE=1 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 9.387e-18 Identity = 45/76 (59.21%), Postives = 60/76 (78.95%), Query Frame = 1 Query: 310 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQ 537 AK L F++ A + L+ GVN +A+ V VTLGP+GRNVV+E K+G+P I DGVTVAKEVELED +ENIGA+L+++ Sbjct: 2 AKQLVFDES--ARRSLERGVNAVANAVKVTLGPRGRNVVIEKKFGSPTITKDGVTVAKEVELEDKLENIGAQLLKE 75
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH60_DEIDV (60 kDa chaperonin OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=groL PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.387e-18 Identity = 46/76 (60.53%), Postives = 59/76 (77.63%), Query Frame = 1 Query: 310 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQ 537 AK L F D A + L+ GVN +A+ V VTLGP+GRNVV+E K+G+P I DGVTVAKEVELED +ENIGA+L+++ Sbjct: 2 AKQLVF--DEAARRSLERGVNAVANAVKVTLGPRGRNVVIEKKFGSPTITKDGVTVAKEVELEDKLENIGAQLLKE 75
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH60_COLP3 (60 kDa chaperonin OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=groL PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.387e-18 Identity = 45/77 (58.44%), Postives = 57/77 (74.03%), Query Frame = 1 Query: 307 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQ 537 AAKD+ F D A K+ GVN LAD V VTLGPKGRNVV++ +G P I DGVTVAKE+EL+D EN+GA++V++ Sbjct: 2 AAKDVLFGND--ARTKMLRGVNVLADAVKVTLGPKGRNVVIDKSFGGPTITKDGVTVAKEIELDDKFENMGAQMVKE 76 The following BLAST results are available for this feature:
BLAST of CX287064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287064 ID=CX287064; Name=CX287064; organism=Citrus clementina; type=EST; length=540bpback to top |