CX287079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287079 vs. ExPASy Swiss-Prot
Match: GLR33_ARATH (Glutamate receptor 3.3 OS=Arabidopsis thaliana GN=GLR3.3 PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 3.903e-62 Identity = 119/165 (72.12%), Postives = 134/165 (81.21%), Query Frame = 2 Query: 2 EKTVSALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEFNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSIVGQEFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHD 496 E TVS LGR NSSYTASLTSILTVQ+LSSPIKGI+SLR + PIGYQV SFA +YL +E NI ESRLVPL +PE YAKALKDGP KGGVAA+VD+R Y ELFLS+ C + IVGQEFTK+GWGFAFPRDSPLA+D+STAIL+L+ENGDLQRIHD Sbjct: 640 ENTVSTLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLRERDDPIGYQVGSFAESYLRNELNISESRLVPLGTPEAYAKALKDGPSKGGVAAIVDERPYVELFLSSNCAYRIVGQEFTKSGWGFAFPRDSPLAIDLSTAILELAENGDLQRIHD 804
BLAST of CX287079 vs. ExPASy Swiss-Prot
Match: GLR36_ARATH (Glutamate receptor 3.6 OS=Arabidopsis thaliana GN=GLR3.6 PE=2 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 1.813e-59 Identity = 116/165 (70.30%), Postives = 131/165 (79.39%), Query Frame = 2 Query: 2 EKTVSALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEFNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSIVGQEFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHD 496 E T S LGR NSSYTASLTSILTV +LSSPIKGI++L++++ PIGY SF R+YL+ E NI SRLVPL SPEEY KAL+DGP KGGVAAVVD+RAY ELFLS RCEF IVGQEFTKNGWGFAFPR+SPLAVD+S AIL+LSENGD+QRI D Sbjct: 630 ETTTSNLGRIVLIIWLFVVLIINSSYTASLTSILTVHQLSSPIKGIETLQTNHDPIGYPQGSFVRDYLIHELNIHVSRLVPLRSPEEYDKALRDGPGKGGVAAVVDERAYIELFLSNRCEFGIVGQEFTKNGWGFAFPRNSPLAVDVSAAILQLSENGDMQRIRD 794
BLAST of CX287079 vs. ExPASy Swiss-Prot
Match: GLR31_ORYSJ (Glutamate receptor 3.1 OS=Oryza sativa subsp. japonica GN=GLR3.1 PE=1 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 1.942e-53 Identity = 108/165 (65.45%), Postives = 123/165 (74.55%), Query Frame = 2 Query: 2 EKTVSALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEFNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSIVGQEFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHD 496 E T S LGR SSYTASLTSILTVQ+L+SPI GIDSL +S+ PIG+QV SFA NYL E + SRL L SPEEY KAL GP KGGVAA+VD+R Y ELFL +F++VG EFTK+GWGFAFPRDSPL+VD+STAIL+LSENGDLQRIHD Sbjct: 642 EDTRSTLGRFVIIIWLFVVLIIQSSYTASLTSILTVQQLTSPITGIDSLITSDVPIGFQVGSFAENYLAQELGVAHSRLKALGSPEEYKKALDLGPSKGGVAAIVDERPYIELFLYQNPKFAVVGSEFTKSGWGFAFPRDSPLSVDLSTAILELSENGDLQRIHD 806
BLAST of CX287079 vs. ExPASy Swiss-Prot
Match: GLR31_ARATH (Glutamate receptor 3.1 OS=Arabidopsis thaliana GN=GLR3.1 PE=2 SV=2) HSP 1 Score: 201.06 bits (510), Expect = 2.374e-51 Identity = 107/165 (64.85%), Postives = 124/165 (75.15%), Query Frame = 2 Query: 2 EKTVSALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEFNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSIVGQEFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHD 496 E TVS LGR SSYTASLTSILTVQ+L+SPIKG+D+L SS IG+QV SFA NY+ DE NI SRLVPL SPEEYA AL++G VAA+VD+R Y +LFLS C+F+I GQEFT+ GWGFAFPRDSPLAVD+STAIL LSE G+LQ+IHD Sbjct: 641 ETTVSTLGRMVLLIWLFVVLIITSSYTASLTSILTVQQLNSPIKGVDTLISSTGRIGFQVGSFAENYMTDELNIASSRLVPLASPEEYANALQNGT----VAAIVDERPYIDLFLSDYCKFAIRGQEFTRCGWGFAFPRDSPLAVDMSTAILGLSETGELQKIHD 801
BLAST of CX287079 vs. ExPASy Swiss-Prot
Match: GLR32_ARATH (Glutamate receptor 3.2 OS=Arabidopsis thaliana GN=GLR3.2 PE=1 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 1.539e-50 Identity = 102/165 (61.82%), Postives = 125/165 (75.76%), Query Frame = 2 Query: 2 EKTVSALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEFNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSIVGQEFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHD 496 E TVS LGR SSYTASLTSILTVQ+L+SPI+G+D+L SS+ +G+QV S+A NY++DE NI SRLVPL SP+EYA AL++G VAA+VD+R Y +LFLS C F+I GQEFT++GWGFAFPRDSPLA+D+STAIL LSE G LQ+IHD Sbjct: 641 ENTVSTLGRAVLLIWLFVVLIITSSYTASLTSILTVQQLNSPIRGVDTLISSSGRVGFQVGSYAENYMIDELNIARSRLVPLGSPKEYAAALQNGT----VAAIVDERPYVDLFLSEFCGFAIRGQEFTRSGWGFAFPRDSPLAIDMSTAILGLSETGQLQKIHD 801
BLAST of CX287079 vs. ExPASy Swiss-Prot
Match: GLR34_ARATH (Glutamate receptor 3.4 OS=Arabidopsis thaliana GN=GLR3.4 PE=2 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 4.190e-48 Identity = 98/165 (59.39%), Postives = 124/165 (75.15%), Query Frame = 2 Query: 2 EKTVSALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEFNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFL-STRCEFSIVGQEFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIH 493 E TVS+LGR NSSYTASLTSILT+++L+S I+GIDSL +SN PIG Q +FARNYL++E NI SR+VPL E+Y AL+ GP+ GGVAA+VD+ Y E+ L ++ C+F VGQEFT+ GWGFAF RDSPLAVD+STAIL+LSE G+L++IH Sbjct: 667 ENTVSSLGRFVLIIWLFVVLIINSSYTASLTSILTIRQLTSRIEGIDSLVTSNEPIGVQDGTFARNYLINELNILPSRIVPLKDEEQYLSALQRGPNAGGVAAIVDELPYIEVLLTNSNCKFRTVGQEFTRTGWGFAFQRDSPLAVDMSTAILQLSEEGELEKIH 831
BLAST of CX287079 vs. ExPASy Swiss-Prot
Match: GLR35_ARATH (Glutamate receptor 3.5 OS=Arabidopsis thaliana GN=GLR3.5 PE=2 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 3.670e-44 Identity = 94/164 (57.32%), Postives = 117/164 (71.34%), Query Frame = 2 Query: 2 EKTVSALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEFNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLS-TRCEFSIVGQEFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRI 490 E TVS LGR NSSYTASLTSILTVQ+L+S I+G+D+L +SN PIG Q +FA +LV+E NI SR++PL EEY AL+ GP GGVAA+VD+ Y + LS + C+F VGQEFT+ GWGFAF RDSPLAVD+STAIL+L+E G L++I Sbjct: 660 ENTVSTLGRFVLLVWLFVVLIINSSYTASLTSILTVQQLTSRIEGMDTLIASNEPIGVQDGTFAWKFLVNELNIAPSRIIPLKDEEEYLSALQRGPRGGGVAAIVDELPYIKALLSNSNCKFRTVGQEFTRTGWGFAFQRDSPLAVDMSTAILQLAEEGKLEKI 823
BLAST of CX287079 vs. ExPASy Swiss-Prot
Match: GLR37_ARATH (Glutamate receptor 3.7 OS=Arabidopsis thaliana GN=GLR3.7 PE=2 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 9.996e-42 Identity = 94/164 (57.32%), Postives = 109/164 (66.46%), Query Frame = 2 Query: 2 EKTVSALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEFNIDESRLVPLNSPEEYAKALKDGP-HKGGVAAVVDDRAYAELFLSTRCEFSIVGQEFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRI 490 E T+S L R +SYTA+LTSILTVQ+L S I GIDSLR+S PIGYQ +F YL + SRLVPL+S EEY KALK GP + GGVAA+VD+ Y ELFL+ R F IVG+ F GWGFAF RDSPLA+D+STAILKLSE LQ I Sbjct: 632 EDTISNLARLVMIVWLFLLMVLTASYTANLTSILTVQQLPSAITGIDSLRASEVPIGYQAGTFTLEYLTYSLGMARSRLVPLDSTEEYEKALKLGPTNWGGVAAIVDELPYIELFLAERTGFKIVGEPFMHRGWGFAFKRDSPLAIDMSTAILKLSETRKLQEI 795
BLAST of CX287079 vs. ExPASy Swiss-Prot
Match: GLR25_ARATH (Glutamate receptor 2.5 OS=Arabidopsis thaliana GN=GLR2.5 PE=1 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.603e-23 Identity = 62/142 (43.66%), Postives = 84/142 (59.15%), Query Frame = 2 Query: 74 SYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEFNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRC-EFSIVGQEFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHD 496 SYTA+LTS+LTVQ+L ++ +D LR S IGYQ SF L + DESRL NSPEE + GG+ A D+ AY +LF++ C E+SI+ F +G+GFAFP SPL DIS IL ++E ++ I + Sbjct: 663 SYTATLTSMLTVQELRPTVRHMDDLRKSGVNIGYQTGSFTFERL-KQMRFDESRLKTYNSPEEMRELFLHKSSNGGIDAAFDEVAYIKLFMAKYCSEYSIIEPTFKADGFGFAFPLGSPLVSDISRQILNITEGDAMKAIEN 803
BLAST of CX287079 vs. ExPASy Swiss-Prot
Match: GLR24_ARATH (Glutamate receptor 2.4 OS=Arabidopsis thaliana GN=GLR2.4 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 7.447e-21 Identity = 60/158 (37.97%), Postives = 85/158 (53.80%), Query Frame = 2 Query: 2 EKTVSALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEFNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRC-EFSIVGQEFTKNGWGFAFPRDSPLAVDISTAILKLSEN 472 E+ +S R SYTASL+S+LT Q+L+ I ++ + P+ YQ +SF L E ESRLVP SPE+ + L GP KGGV+A + Y +FL C ++ +V F +G+GF FP SPL D+S AILK++E+ Sbjct: 619 ERVMSFTARVVVITWYFIVLVLTQSYTASLSSLLTTQQLNPTETSIKNVLAKGGPVAYQRDSFVLGKL-RESGFPESRLVPFTSPEKCEELLNKGPSKGGVSAAFMEVPYVRVFLGQYCKKYKMVEVPFDVDGFGFVFPIGSPLVADVSRAILKVAES 775 The following BLAST results are available for this feature:
BLAST of CX287079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287079 ID=CX287079; Name=CX287079; organism=Citrus clementina; type=EST; length=498bpback to top |