CX287395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287395 vs. ExPASy Swiss-Prot
Match: PDR4_ORYSJ (Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 6.075e-44 Identity = 82/146 (56.16%), Postives = 105/146 (71.92%), Query Frame = 1 Query: 7 EDSSKLIEYFQGISGVPQIKANYNPATWMLEVTSASTEAELGLDFAKIYLKSPLYQETIELVNRLSEPQPGSKELRFPTRYPQSSMEQYLACLWKQHLSYWRSPEYNMARFVFMIFAALLFGAVVWQKGKEINKEEDLFVILGSMY 444 ++SSKLIEYF+GI GV +IK YNPATWMLEVTS++ E LG+DF++IY +S LYQ EL+ LS P PGS +L FPT+Y +S + Q LACLWKQ+ SYWR+P Y R +F I AL+FG + W G K++DLF +GSMY Sbjct: 1091 QNSSKLIEYFEGIDGVSRIKDGYNPATWMLEVTSSAQEEMLGVDFSEIYRQSELYQRNKELIEELSTPPPGSTDLNFPTQYSRSFITQCLACLWKQNWSYWRNPSYTAVRLLFTIVIALMFGTMFWNLGTRTKKQQDLFNAMGSMY 1236
BLAST of CX287395 vs. ExPASy Swiss-Prot
Match: PDR12_ORYSJ (Pleiotropic drug resistance protein 12 OS=Oryza sativa subsp. japonica GN=PDR12 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.767e-43 Identity = 76/145 (52.41%), Postives = 107/145 (73.79%), Query Frame = 1 Query: 10 DSSKLIEYFQGISGVPQIKANYNPATWMLEVTSASTEAELGLDFAKIYLKSPLYQETIELVNRLSEPQPGSKELRFPTRYPQSSMEQYLACLWKQHLSYWRSPEYNMARFVFMIFAALLFGAVVWQKGKEINKEEDLFVILGSMY 444 +S K+IEYF+ I GVP+IK YNPATWMLEV+S + E L +DFA+ Y S LY++ LVN+LS+P+PG+ +L FPT+Y QS++ Q+ ACLWKQ L+YWRSP+YN+ RF F +F ALL G + W+ G ++ L +++G+MY Sbjct: 1139 NSQKMIEYFEAIPGVPKIKDKYNPATWMLEVSSVAAEVRLNMDFAEYYKTSDLYKQNKVLVNQLSQPEPGTSDLHFPTKYSQSTIGQFRACLWKQWLTYWRSPDYNLVRFSFTLFTALLLGTIFWKIGTKMGNANSLRMVIGAMY 1283
BLAST of CX287395 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSJ (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica GN=PDR3 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 6.716e-43 Identity = 81/144 (56.25%), Postives = 101/144 (70.14%), Query Frame = 1 Query: 13 SSKLIEYFQGISGVPQIKANYNPATWMLEVTSASTEAELGLDFAKIYLKSPLYQETIELVNRLSEPQPGSKELRFPTRYPQSSMEQYLACLWKQHLSYWRSPEYNMARFVFMIFAALLFGAVVWQKGKEINKEEDLFVILGSMY 444 SS+LI+YF+ I GV +IK YNPATWMLEVT+ E LG+DF+ IY KS LYQ L+ LS+P P S +L FPT+Y QSS+ Q +ACLWKQ+LSYWR+P YN RF F ALLFG + W G ++ K +DLF +GSMY Sbjct: 1101 SSELIKYFESIPGVSKIKDGYNPATWMLEVTTIGQEQALGVDFSDIYKKSELYQRNKALIKDLSQPAPDSSDLYFPTQYSQSSLTQCMACLWKQNLSYWRNPPYNAVRFFFTTVIALLFGTIFWDLGGKVTKSQDLFNAMGSMY 1244
BLAST of CX287395 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSI (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. indica GN=PDR3 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 6.716e-43 Identity = 81/144 (56.25%), Postives = 101/144 (70.14%), Query Frame = 1 Query: 13 SSKLIEYFQGISGVPQIKANYNPATWMLEVTSASTEAELGLDFAKIYLKSPLYQETIELVNRLSEPQPGSKELRFPTRYPQSSMEQYLACLWKQHLSYWRSPEYNMARFVFMIFAALLFGAVVWQKGKEINKEEDLFVILGSMY 444 SS+LI+YF+ I GV +IK YNPATWMLEVT+ E LG+DF+ IY KS LYQ L+ LS+P P S +L FPT+Y QSS+ Q +ACLWKQ+LSYWR+P YN RF F ALLFG + W G ++ K +DLF +GSMY Sbjct: 1101 SSELIKYFESIPGVSKIKDGYNPATWMLEVTTIGQEQALGVDFSDIYKKSELYQRNKALIKDLSQPAPDSSDLYFPTQYSQSSLTQCMACLWKQNLSYWRNPPYNAVRFFFTTVIALLFGTIFWDLGGKVTKSQDLFNAMGSMY 1244
BLAST of CX287395 vs. ExPASy Swiss-Prot
Match: PDR3_TOBAC (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum GN=PDR3 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 1.146e-42 Identity = 75/145 (51.72%), Postives = 109/145 (75.17%), Query Frame = 1 Query: 10 DSSKLIEYFQGISGVPQIKANYNPATWMLEVTSASTEAELGLDFAKIYLKSPLYQETIELVNRLSEPQPGSKELRFPTRYPQSSMEQYLACLWKQHLSYWRSPEYNMARFVFMIFAALLFGAVVWQKGKEINKEEDLFVILGSMY 444 +S K+IEYF+GIS VP+IK N+NPATWMLEVTS S+EA++ +DFA++Y S L++ ELV +LS P GSK+L FPTR+ Q+ Q+ C WKQ+ SYWRSP YN+ R + M+FA+L+ G + W KGK+++ ++ +F + G+M+ Sbjct: 1087 NSCKMIEYFEGISCVPKIKNNHNPATWMLEVTSTSSEADISIDFAEVYKNSALHKNNEELVKKLSFPPAGSKDLHFPTRFSQNGWGQFKTCFWKQYWSYWRSPSYNLMRSLHMLFASLVSGLLFWDKGKKLDNQQSVFSVFGAMF 1231
BLAST of CX287395 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 4.353e-42 Identity = 81/144 (56.25%), Postives = 97/144 (67.36%), Query Frame = 1 Query: 13 SSKLIEYFQGISGVPQIKANYNPATWMLEVTSASTEAELGLDFAKIYLKSPLYQETIELVNRLSEPQPGSKELRFPTRYPQSSMEQYLACLWKQHLSYWRSPEYNMARFVFMIFAALLFGAVVWQKGKEINKEEDLFVILGSMY 444 SS+LI+YF+GI GV +IK YNPATWMLEV++ S E LG+DF IY KS L+Q L+ LS P PGS EL FPT+Y S + Q LACLWK HLSYWR+P YN R F ALLFG + W G + K +DLF +GSMY Sbjct: 1108 SSELIKYFEGIKGVSRIKDGYNPATWMLEVSTISQEQALGVDFCDIYRKSELFQRNKALIQELSTPPPGSSELYFPTKYSLSFLNQCLACLWKMHLSYWRNPPYNAIRLFFTTVIALLFGTIFWDLGGKTGKSQDLFNAMGSMY 1251
BLAST of CX287395 vs. ExPASy Swiss-Prot
Match: PDR1_ORYSJ (Probable pleiotropic drug resistance protein 1 OS=Oryza sativa subsp. japonica GN=PDR1 PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.267e-41 Identity = 80/144 (55.56%), Postives = 98/144 (68.06%), Query Frame = 1 Query: 13 SSKLIEYFQGISGVPQIKANYNPATWMLEVTSASTEAELGLDFAKIYLKSPLYQETIELVNRLSEPQPGSKELRFPTRYPQSSMEQYLACLWKQHLSYWRSPEYNMARFVFMIFAALLFGAVVWQKGKEINKEEDLFVILGSMY 444 SS+LI+YF+GI GV +I YNPATWMLEVT+ S E L +DF IY KS L+Q L+ LS P PGS EL FPT+Y QS + Q LACLWKQHLSYWR+P YN R F AL+FG + W G ++ + +DLF +GSMY Sbjct: 1112 SSELIKYFEGIQGVSKITDGYNPATWMLEVTTVSQEQALDVDFCDIYRKSELFQRNKALIQELSTPPPGSSELYFPTQYSQSFLIQCLACLWKQHLSYWRNPPYNAIRLFFTTVIALIFGTIFWDLGGKMGQSQDLFNAMGSMY 1255
BLAST of CX287395 vs. ExPASy Swiss-Prot
Match: PDR15_ORYSJ (Pleiotropic drug resistance protein 15 OS=Oryza sativa subsp. japonica GN=PDR15 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 6.286e-41 Identity = 73/145 (50.34%), Postives = 103/145 (71.03%), Query Frame = 1 Query: 10 DSSKLIEYFQGISGVPQIKANYNPATWMLEVTSASTEAELGLDFAKIYLKSPLYQETIELVNRLSEPQPGSKELRFPTRYPQSSMEQYLACLWKQHLSYWRSPEYNMARFVFMIFAALLFGAVVWQKGKEINKEEDLFVILGSMY 444 +S K++EYF+ I GVP+I+ N NPATWML+V+SA++E L +DFA+ Y S ++Q T LV LS P PGS +L FP++Y QS+ Q+ CLWKQ +YWRSP+YN+ R F +F AL+ G + W+ G ++ +DL VI+GSMY Sbjct: 1148 NSHKVVEYFEAIPGVPKIEENRNPATWMLDVSSAASEVRLEIDFAEYYRSSTMHQRTKALVKELSNPPPGSDDLYFPSQYSQSTFNQFKLCLWKQWWTYWRSPDYNLVRIFFALFTALMLGTIFWRVGHKMESSKDLLVIIGSMY 1292
BLAST of CX287395 vs. ExPASy Swiss-Prot
Match: AB42G_ARATH (ABC transporter G family member 42 OS=Arabidopsis thaliana GN=ABCG42 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.389e-40 Identity = 74/146 (50.68%), Postives = 105/146 (71.92%), Query Frame = 1 Query: 7 EDSSKLIEYFQGISGVPQIKANYNPATWMLEVTSASTEAELGLDFAKIYLKSPLYQETIELVNRLSEPQPGSKELRFPTRYPQSSMEQYLACLWKQHLSYWRSPEYNMARFVFMIFAALLFGAVVWQKGKEINKEEDLFVILGSMY 444 + SSK+IEYF I GVP++K N NPATW+L++TS S+E +LG+D A++Y +S L++E ++ + GS+ L +RY Q+S EQ+ ACLWKQHLSYWR+P YN+ R +FM F +L G + WQK KEIN ++DLF + GSM+ Sbjct: 1031 QHSSKVIEYFMRIHGVPKLKENSNPATWILDITSKSSEDKLGVDLAQMYEESTLFKENKMVIEQTRCTSLGSERLILSSRYAQTSWEQFKACLWKQHLSYWRNPSYNLTRIIFMSFTCMLCGILFWQKAKEINNQQDLFNVFGSMF 1176
BLAST of CX287395 vs. ExPASy Swiss-Prot
Match: AB41G_ARATH (ABC transporter G family member 41 OS=Arabidopsis thaliana GN=ABCG41 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 3.120e-40 Identity = 75/144 (52.08%), Postives = 101/144 (70.14%), Query Frame = 1 Query: 13 SSKLIEYFQGISGVPQIKANYNPATWMLEVTSASTEAELGLDFAKIYLKSPLYQETIELVNRLSEPQPGSKELRFPTRYPQSSMEQYLACLWKQHLSYWRSPEYNMARFVFMIFAALLFGAVVWQKGKEINKEEDLFVILGSMY 444 SSK+I+YF+ I GVP+++ N NPATWML++T S E LG+DFA+ Y S LY+E +V +LS GS+ L FP+RY Q+ Q ACLWKQH SYWR+P +N+ R VF++ +LL + WQK K+IN ++DLF I GSMY Sbjct: 1038 SSKVIKYFESIPGVPKVQKNCNPATWMLDITCKSAEHRLGMDFAQAYKDSTLYKENKMVVEQLSSASLGSEALSFPSRYSQTGWGQLKACLWKQHCSYWRNPSHNLTRIVFILLNSLLCSLLFWQKAKDINNQQDLFSIFGSMY 1181 The following BLAST results are available for this feature:
BLAST of CX287395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287395 ID=CX287395; Name=CX287395; organism=Citrus clementina; type=EST; length=445bpback to top |