CX287413
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287413 vs. ExPASy Swiss-Prot
Match: PRA1D_ARATH (PRA1 family protein D OS=Arabidopsis thaliana GN=PRA1D PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 3.457e-31 Identity = 59/112 (52.68%), Postives = 83/112 (74.11%), Query Frame = 2 Query: 32 LSRVKRTTQSINATRRPWSDFLDLSAFNLPLSLSDATTRITQNLTHFRSNYAVITLLALFLSLIYHPVSIIVFLLTLVAWFFLYFARDDPLTVLGFQVDDRVVIGALFAVTV 367 ++ +K T QSI RPW DFLDLSAF+ P S++DATTR+TQNLTHFR NY++I + L L+LI P++I+ F+ +AWFFLYFAR++PLT+ GF +DD +V L +++ Sbjct: 6 ITGIKETAQSITGAARPWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLITRPIAILAFIAVGLAWFFLYFAREEPLTIFGFTIDDGIVAVLLIGLSI 117
BLAST of CX287413 vs. ExPASy Swiss-Prot
Match: PR1F2_ARATH (PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 5.166e-27 Identity = 58/118 (49.15%), Postives = 75/118 (63.56%), Query Frame = 2 Query: 14 ASDTGFLSRVKRTTQSINATRRPWSDFLDLSAFNLPLSLSDATTRITQNLTHFRSNYAVITLLALFLSLIYHPVSIIVFLLTLVAWFFLYFARDDPLTVLGFQVDDRVVIGALFAVTV 367 A D ++SR K +S ATRRPW D + LP DA +RI NL +FR+NYA+ L LFLSL+YHP S+IV + +V W FLYF RD+PL V G+Q+DDR V+ L +TV Sbjct: 16 AIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTV 133
BLAST of CX287413 vs. ExPASy Swiss-Prot
Match: PR1F3_ARATH (PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.273e-25 Identity = 55/116 (47.41%), Postives = 74/116 (63.79%), Query Frame = 2 Query: 20 DTGFLSRVKRTTQSINATRRPWSDFLDLSAFNLPLSLSDATTRITQNLTHFRSNYAVITLLALFLSLIYHPVSIIVFLLTLVAWFFLYFARDDPLTVLGFQVDDRVVIGALFAVTV 367 D LSR K ++ ATRR W D + LP +SDA TRI NL +FR NYA++ L+ +F SLI+HP S+IVF + +V W FLYF RD+P+ + FQ+DDR V+ L +TV Sbjct: 18 DVESLSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTVLIVLSVLTV 133
BLAST of CX287413 vs. ExPASy Swiss-Prot
Match: PRA1E_ARATH (PRA1 family protein E OS=Arabidopsis thaliana GN=PRA1E PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 4.094e-24 Identity = 51/113 (45.13%), Postives = 75/113 (66.37%), Query Frame = 2 Query: 35 SRVKRTTQSINATRRPWSDFLDLSAFNLPLSLSDATTRITQNLTHFRSNYAVITLLALFLSLIYHPVSIIVFLLTLVAWFFLYFARD--DPLTVLGFQVDDRVVIGALFAVTV 367 +R K+TTQS+ T RPW + LDLSA +LP +A + N+++FR NYA+ L +FL LIYHP+S+I F++ + W LYF+RD D + + G +VDD++V+ L VTV Sbjct: 34 ARAKQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTV 146
BLAST of CX287413 vs. ExPASy Swiss-Prot
Match: PR1F4_ARATH (PRA1 family protein F4 OS=Arabidopsis thaliana GN=PRA1F4 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 3.465e-23 Identity = 53/112 (47.32%), Postives = 70/112 (62.50%), Query Frame = 2 Query: 32 LSRVKRTTQSINATRRPWSDFLDLSAFNLPLSLSDATTRITQNLTHFRSNYAVITLLALFLSLIYHPVSIIVFLLTLVAWFFLYFARDDPLTVLGFQVDDRVVIGALFAVTV 367 +SR K+ + ATRR W DL + LP +SD +RI NL +FRSNYA++ L +F SLI+HP S+IVF + W FLYF RD PL V FQ+DDR V+ L +T+ Sbjct: 22 ISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSRIKTNLAYFRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVLIGLSVITI 133
BLAST of CX287413 vs. ExPASy Swiss-Prot
Match: PR1F1_ARATH (PRA1 family protein F1 OS=Arabidopsis thaliana GN=PRA1F1 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 4.526e-23 Identity = 47/101 (46.53%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 68 ATRRPWSDFLDLSAFNLPLSLSDATTRITQNLTHFRSNYAVITLLALFLSLIYHPVSIIVFLLTLVAWFFLYFARDDPLTVLGFQVDDRVVIGALFAVTVT 370 ATRRPW LDL +FN P L+ TRI N +F++NY ++ L ++FLSLI++P S++V L L AW FLYF RD+PLTV ++D R+V+ + +T++ Sbjct: 34 ATRRPWKQMLDLGSFNFPRKLATVITRIRANTVYFQTNYTIVVLFSVFLSLIWNPFSLLVLLALLGAWLFLYFLRDEPLTVFDREIDHRIVLIIMSVITLS 134
BLAST of CX287413 vs. ExPASy Swiss-Prot
Match: PR1B3_ARATH (PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.684e-20 Identity = 51/115 (44.35%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 29 FLSRVKRTTQSINATRRPWSDFLDLSAFNLPLSLSDATTRITQNLTHFRSNYAVITLLALFLSLIYHPVSIIVFLLTLVAWFFLYFAR--DDPLTVLGFQVDDRVVIGALFAVTV 367 FLSR+ + + + RRPW + +D SA + P SL+DA +RI +NL +F+ NY I L L LSL+ HP S++V L AW FLY R D PL VLG DR +G L +T+ Sbjct: 32 FLSRLSSSIRQSLSQRRPWLELVDRSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQPLVVLGRTFSDRETLGVLVILTI 146
BLAST of CX287413 vs. ExPASy Swiss-Prot
Match: PR1B6_ARATH (PRA1 family protein B6 OS=Arabidopsis thaliana GN=PRA1B6 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.666e-17 Identity = 45/114 (39.47%), Postives = 67/114 (58.77%), Query Frame = 2 Query: 32 LSRVKRTTQSINATRRPWSDFLDLSAFNLPLSLSDATTRITQNLTHFRSNYAVITLLALFLSLIYHPVSIIVFLLTLVAWFFLYFAR--DDPLTVLGFQVDDRVVIGALFAVTV 367 LSRV T + +A RPW++ +D SAF+ P SLS+AT+R+ +N ++FR+NY + + L SL+ HP ++ + +W FLYF R D PL + G D +G L TV Sbjct: 30 LSRVLATVRHASADARPWAELVDRSAFSRPPSLSEATSRVRKNFSYFRANYITLVAILLAASLLTHPFALFLLASLAASWLFLYFFRPADQPLVIGGRTFSDLETLGILCLSTV 143
BLAST of CX287413 vs. ExPASy Swiss-Prot
Match: PR1B2_ARATH (PRA1 family protein B2 OS=Arabidopsis thaliana GN=PRA1B2 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.711e-17 Identity = 46/115 (40.00%), Postives = 67/115 (58.26%), Query Frame = 2 Query: 29 FLSRVKRTTQSINATRRPWSDFLDLSAFNLPLSLSDATTRITQNLTHFRSNYAVITLLALFLSLIYHPVSIIVFLLTLVAWFFLYFAR--DDPLTVLGFQVDDRVVIGALFAVTV 367 FLSR+ + + + RRPW + +D S+F P SL+D+ +RI +NL +F+ NY+ I L L SL+ HP S++V L L +W FLY R D PL + G DR + L T+ Sbjct: 31 FLSRLSSSLRESLSQRRPWLELVDRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTI 145
BLAST of CX287413 vs. ExPASy Swiss-Prot
Match: PR1B1_ARATH (PRA1 family protein B1 OS=Arabidopsis thaliana GN=PRA1B1 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.410e-16 Identity = 46/115 (40.00%), Postives = 65/115 (56.52%), Query Frame = 2 Query: 29 FLSRVKRTTQSINATRRPWSDFLDLSAFNLPLSLSDATTRITQNLTHFRSNYAVITLLALFLSLIYHPVSIIVFLLTLVAWFFLYFAR--DDPLTVLGFQVDDRVVIGALFAVTV 367 F SR+ + + + RRPW++ +D S+ P SL+DA +RI +NL +F+ NY I L L SL HP+S++V + L W FLY R D PL V G DR + AL T+ Sbjct: 29 FFSRLSTSIRDGLSQRRPWTELIDRSSMARPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQPLVVFGRTFSDRETLLALVLSTI 143 The following BLAST results are available for this feature:
BLAST of CX287413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287413 ID=CX287413; Name=CX287413; organism=Citrus clementina; type=EST; length=445bpback to top |