CX287616
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287616 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 4.591e-55 Identity = 106/127 (83.46%), Postives = 117/127 (92.13%), Query Frame = -3 Query: 60 KIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQPNAIDGTFSEVTEVQPEFVLAATENSEIVDA 440 K+VVSSCGHDGPFGATGVKRLKSIGMI+ VPGMKALDMN+AEDAIVRLTRE+VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LGQPNA+DGT+ V V PE +LAA +++E DA Sbjct: 232 KVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTY--VGGVHPELILAAADSAETADA 356
BLAST of CX287616 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 1.745e-54 Identity = 109/127 (85.83%), Postives = 114/127 (89.76%), Query Frame = -3 Query: 60 KIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQPNAIDGTFSEVTEVQPEFVLAATENSEIVDA 440 KIVVSSCGHDGPFGATGVKRLKSIGMID VPGMKALDMNTAEDAIVRLTRE+VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKA LALKALG PNAIDGT V + PE VLAA +++E VDA Sbjct: 225 KIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGLPNAIDGTL--VGNLSPELVLAAADSAETVDA 349
BLAST of CX287616 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 3.886e-54 Identity = 105/127 (82.68%), Postives = 116/127 (91.34%), Query Frame = -3 Query: 60 KIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQPNAIDGTFSEVTEVQPEFVLAATENSEIVDA 440 K+VVSSCGHDGPFGATGVK L+SIGMID+VPGMKALDMN AEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG PNA+DG++ V + PE +LAA +++EI DA Sbjct: 228 KVVVSSCGHDGPFGATGVKSLRSIGMIDTVPGMKALDMNVAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGLPNALDGSY--VGGIHPELILAAADSAEIADA 352
BLAST of CX287616 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 9.573e-53 Identity = 101/127 (79.53%), Postives = 113/127 (88.98%), Query Frame = -3 Query: 60 KIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQPNAIDGTFSEVTEVQPEFVLAATENSEIVDA 440 K+VVSSCGHDGPFGATGVKRL+ IGMI +VPGMKALDMN AED IVRLTRE+VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG+PNA+DGT EV+ E + A+++ E+VDA Sbjct: 228 KVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKALDMNAAEDEIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGTIPEVSPALREEFVIASKDDEVVDA 354
BLAST of CX287616 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 3.079e-51 Identity = 101/127 (79.53%), Postives = 112/127 (88.19%), Query Frame = -3 Query: 60 KIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQPNAIDGTFSEVTEVQPEFVLAATENSEIVDA 440 K+VVSSCGHDGPFGATGVKRL+ IGMI +VPGMKALDMNTAED IVRLTRE+VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG+PNA+DGT S E ++ A ++ E+VDA Sbjct: 231 KVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKALDMNTAEDEIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGTMSPPLR---EELMIAYKDDEVVDA 354
BLAST of CX287616 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.392e-27 Identity = 60/93 (64.52%), Postives = 75/93 (80.65%), Query Frame = -3 Query: 159 IVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 437 +V+S+ GHD P GA VKRL S+G I+ + GM+ LDMN AEDAIV+ TREIVPG+IV GME++E+DGA RMGPTFGAM++SG KAA ALK + Sbjct: 223 LVISTTGHDAPMGAFCVKRLVSMGRIEKLGGMRGLDMNVAEDAIVKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMVLSGLKAAEEALKVI 315
BLAST of CX287616 vs. ExPASy Swiss-Prot
Match: THI4_ASPOR (Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 9.022e-27 Identity = 56/95 (58.95%), Postives = 74/95 (77.89%), Query Frame = -3 Query: 153 IVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQ 437 +++S+ GHDGPFGA KRL S+G +D + GM+ LDMN+AEDAIV+ TRE+ G+I+ GME++EIDG RMGPTFGAM++SG KAA ALK + Sbjct: 226 VIISTTGHDGPFGAFCAKRLVSMGSVDKLGGMRGLDMNSAEDAIVKNTREVTKGLIIGGMELSEIDGFNRMGPTFGAMVLSGVKAAEEALKVFDE 320
BLAST of CX287616 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 1.178e-26 Identity = 59/91 (64.84%), Postives = 73/91 (80.22%), Query Frame = -3 Query: 165 IVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 437 +++S+ GHDGP GA VKRL S+ I+ + GM+ LDMN AEDAIV+ TREIVPG+IV GME++E+DGA RMGPTFGAM +SG KAA ALK Sbjct: 219 LIISTTGHDGPMGAFCVKRLVSMQRIEKLGGMRGLDMNLAEDAIVKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMALSGLKAAEEALK 309
BLAST of CX287616 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 2.902e-25 Identity = 58/100 (58.00%), Postives = 72/100 (72.00%), Query Frame = -3 Query: 138 IVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQPNAID 437 +VVS+ GHDGPFGA VKRL S ++ ++ M+ LDMN AED IV+ TRE+ PGMIV GME++E DGA RMGPTFG MM SG KAA AL + A++ Sbjct: 225 LVVSATGHDGPFGAFCVKRLASAQLVSNLHDMRPLDMNRAEDLIVKGTREVFPGMIVGGMELSEFDGANRMGPTFGGMMFSGIKAAQEALAIFDERKAVN 324
BLAST of CX287616 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.457e-24 Identity = 54/101 (53.47%), Postives = 74/101 (73.27%), Query Frame = -3 Query: 135 IVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQPNAIDG 437 +V S GHDGPFGA VKR+ S G+ + + M+ LDM AED I TREI+PG+IV GME++E DG+ RMGPTFGAM++SG++AA +AL++L + +G Sbjct: 231 LVCSFAGHDGPFGAFCVKRVASAGLSEGLGDMRPLDMERAEDHIANKTREILPGLIVGGMELSEFDGSARMGPTFGAMLLSGKRAAEVALQSLDRVKIEEG 331 The following BLAST results are available for this feature:
BLAST of CX287616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287616 ID=CX287616; Name=CX287616; organism=Citrus clementina; type=EST; length=451bpback to top |