CX287806
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287806 vs. ExPASy Swiss-Prot
Match: AP1M1_MOUSE (AP-1 complex subunit mu-1 OS=Mus musculus GN=Ap1m1 PE=1 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 1.252e-13 Identity = 42/107 (39.25%), Postives = 58/107 (54.21%), Query Frame = 2 Query: 2 TRMEVNVKIKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNASIDCLVWKIRKFPGQTEPTMSAEVELISTMAEKKSWTRPPIQMEFQVPMFTASGLRVRF 322 +R+E VK KS F + A V I IPVP F+ T G K+ +VW ++ FPG E M A L S AE K +PPI ++F++P FT SG++VR+ Sbjct: 289 SRIEYMVKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSVKSFPGGKEYLMRAHFGLPSVEAEDKE-GKPPISVKFEIPYFTTSGIQVRY 394
BLAST of CX287806 vs. ExPASy Swiss-Prot
Match: AP1M1_HUMAN (AP-1 complex subunit mu-1 OS=Homo sapiens GN=AP1M1 PE=1 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 1.252e-13 Identity = 42/107 (39.25%), Postives = 58/107 (54.21%), Query Frame = 2 Query: 2 TRMEVNVKIKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNASIDCLVWKIRKFPGQTEPTMSAEVELISTMAEKKSWTRPPIQMEFQVPMFTASGLRVRF 322 +R+E +K KS F + A V I IPVP F+ T G K+ +VW I+ FPG E M A L S AE K +PPI ++F++P FT SG++VR+ Sbjct: 289 SRIEYMIKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKE-GKPPISVKFEIPYFTTSGIQVRY 394
BLAST of CX287806 vs. ExPASy Swiss-Prot
Match: AP1M1_BOVIN (AP-1 complex subunit mu-1 OS=Bos taurus GN=AP1M1 PE=1 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 1.252e-13 Identity = 42/107 (39.25%), Postives = 58/107 (54.21%), Query Frame = 2 Query: 2 TRMEVNVKIKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNASIDCLVWKIRKFPGQTEPTMSAEVELISTMAEKKSWTRPPIQMEFQVPMFTASGLRVRF 322 +R+E +K KS F + A V I IPVP F+ T G K+ +VW I+ FPG E M A L S AE K +PPI ++F++P FT SG++VR+ Sbjct: 289 SRIEYMIKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKE-GKPPISVKFEIPYFTTSGIQVRY 394
BLAST of CX287806 vs. ExPASy Swiss-Prot
Match: AP1M1_YEAST (AP-1 complex subunit mu-1-I OS=Saccharomyces cerevisiae GN=APM1 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 2.789e-13 Identity = 44/117 (37.61%), Postives = 65/117 (55.56%), Query Frame = 2 Query: 2 TRMEVNVKIKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNASIDCLVWKIRKFPGQTEPTMSAEVELIS-TMAEKKSWTRP---------PIQMEFQVPMFTASGLRVRF 322 +R+E++ K K+ K A V I IPVP +F+ + G KY ++WKIR FPG E +MSAE+ L S + E + T P P+Q++FQ+P FT SG++VR+ Sbjct: 328 SRIEIHCKAKAQIKRKSTATNVEILIPVPDDADTPTFKYSHGSLKYVPEKSAILWKIRSFPGGKEYSMSAELGLPSISNNEDGNRTMPKSNAEILKGPVQIKFQIPYFTTSGIQVRY 444
BLAST of CX287806 vs. ExPASy Swiss-Prot
Match: AP2M_SCHPO (AP-2 complex subunit mu OS=Schizosaccharomyces pombe GN=apm4 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.384e-12 Identity = 35/83 (42.17%), Postives = 53/83 (63.86%), Query Frame = 2 Query: 74 KIPVPKQTAKTSFQVTSGRAKYNASIDCLVWKIRKFPGQTEPTMSAEVELISTMAEKKSWTRPPIQMEFQVPMFTASGLRVRF 322 +IPVP K + +V G+A Y S + + WKI +F G+TE AEVEL +T ++ W +PPI ++F + MFT+SGL V++ Sbjct: 335 RIPVPTNVVKANPRVNRGKAGYEPSENIINWKIPRFLGETELIFYAEVELSNT-TNQQIWAKPPISLDFNILMFTSSGLHVQY 416
BLAST of CX287806 vs. ExPASy Swiss-Prot
Match: AP1M1_SCHPO (AP-1 complex subunit mu-1 OS=Schizosaccharomyces pombe GN=apm1 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.361e-12 Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 2 Query: 2 TRMEVNVKIKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNASIDCLVWKIRKFPGQTEPTMSAEVELISTMAEK-KSWTRPPIQMEFQVPMFTASGLRVRF 322 +R+E VK K+ F + A V I IPVP+ FQ ++G +Y +VW I+KF G E M AE+ L S E + + P+Q++F +P FT SG++VR+ Sbjct: 289 SRIEFMVKAKAQFKKRCIANNVQIIIPVPEDADSPRFQTSNGHVQYAPEQAAMVWNIKKFAGGKEFFMRAEMGLPSVKNEDIQVQKKRPVQLKFAIPYFTTSGIQVRY 396 The following BLAST results are available for this feature:
BLAST of CX287806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287806 ID=CX287806; Name=CX287806; organism=Citrus clementina; type=EST; length=324bpback to top |