CX288623
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FABF_RHIME (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhizobium meliloti GN=fabF PE=3 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 1.465e-32 Identity = 75/181 (41.44%), Postives = 110/181 (60.77%), Query Frame = 2 Query: 23 DKSKCGVLIGSGLGGMKVFYDAIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALS-QRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 D+ GVLIGSG+GG++ DA LR ++++PF +P N+ + +++ GPN+S+ TAC+T I +A+ I G+A++M+ GG+ + + I L GF AC+ALS Q N++P KASRP+D +RDGFVM HA+ RGAKIYAE G + DA+H+T P D Sbjct: 103 DQISTGVLIGSGIGGLEGIVDAGYTLRDKGPRRISPFFIPGRLINLAAGQVSIRHKLRGPNHSVVTACSTGAHAIGDASRLIALGDADVMVAGGTESPICRISLAGFAACKALSTQHNDNPEKASRPYDADRDGFVMGEGAGIVVLEELEHARARGAKIYAEVIGYGLSGDAFHITAPSED 283
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: KASM_ARATH (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Arabidopsis thaliana GN=KAS PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 8.887e-30 Identity = 72/186 (38.71%), Postives = 110/186 (59.14%), Query Frame = 2 Query: 17 ELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKK----MNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 E +K + GV IG G+G + D +EA ++ +K ++PF +P NM S ++M G+ GPN++ TACAT I +A I G+A++M+ GG+ +++ + + GF RALS + N+ P +ASRP+D +RDGFV+ HAK+RGAKIYAE G + DA+H+T+P D Sbjct: 140 EEEKERTGVSIGGGIGSI---CDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPED 322
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FABF_STAAW (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MW2) GN=fabF PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.876e-28 Identity = 74/184 (40.22%), Postives = 102/184 (55.43%), Query Frame = 2 Query: 11 MNELDKSKCGVLIGSGLGGMKVFYDAIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 +NE + GV IGSG+GGM+ F A + L ++++PF VP +M + +++DLG GPN + TACAT I A + RG+A+ M+ GG+ A + + + GF A RALS N+D A RP+ RDGFVM A+ RGA IYAE G T DAYH+T P P+ Sbjct: 94 INENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALS-TNDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPE 276
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FABF_STAAU (3-oxoacyl-[acyl-carrier-protein] synthase 2 (Fragment) OS=Staphylococcus aureus GN=fabF PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.876e-28 Identity = 74/184 (40.22%), Postives = 102/184 (55.43%), Query Frame = 2 Query: 11 MNELDKSKCGVLIGSGLGGMKVFYDAIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 +NE + GV IGSG+GGM+ F A + L ++++PF VP +M + +++DLG GPN + TACAT I A + RG+A+ M+ GG+ A + + + GF A RALS N+D A RP+ RDGFVM A+ RGA IYAE G T DAYH+T P P+ Sbjct: 87 INENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALS-TNDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPE 269
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FABF_STAAS (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MSSA476) GN=fabF PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.876e-28 Identity = 74/184 (40.22%), Postives = 102/184 (55.43%), Query Frame = 2 Query: 11 MNELDKSKCGVLIGSGLGGMKVFYDAIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 +NE + GV IGSG+GGM+ F A + L ++++PF VP +M + +++DLG GPN + TACAT I A + RG+A+ M+ GG+ A + + + GF A RALS N+D A RP+ RDGFVM A+ RGA IYAE G T DAYH+T P P+ Sbjct: 94 INENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALS-TNDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPE 276
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FABF_STAAR (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MRSA252) GN=fabF PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.876e-28 Identity = 74/184 (40.22%), Postives = 102/184 (55.43%), Query Frame = 2 Query: 11 MNELDKSKCGVLIGSGLGGMKVFYDAIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 +NE + GV IGSG+GGM+ F A + L ++++PF VP +M + +++DLG GPN + TACAT I A + RG+A+ M+ GG+ A + + + GF A RALS N+D A RP+ RDGFVM A+ RGA IYAE G T DAYH+T P P+ Sbjct: 94 INENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALS-TNDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPE 276
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FABF_STAAC (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain COL) GN=fabF PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.876e-28 Identity = 74/184 (40.22%), Postives = 102/184 (55.43%), Query Frame = 2 Query: 11 MNELDKSKCGVLIGSGLGGMKVFYDAIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 +NE + GV IGSG+GGM+ F A + L ++++PF VP +M + +++DLG GPN + TACAT I A + RG+A+ M+ GG+ A + + + GF A RALS N+D A RP+ RDGFVM A+ RGA IYAE G T DAYH+T P P+ Sbjct: 94 INENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALS-TNDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPE 276
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: OXSM_BOVIN (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Bos taurus GN=OXSM PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.086e-27 Identity = 66/182 (36.26%), Postives = 101/182 (55.49%), Query Frame = 2 Query: 14 NELDKSKCGVLIGSGLGGMKVFYD-AIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHP 556 +E D++ GV IG G+ ++V + A+ Y K++PF VP NM S +++ GPN+++STAC T + ++ + G+A++M+ GG+++ + P+ L GF RALS N DP A RP+ RDGFVM HA +RGA++YAE G + DA H+T P P Sbjct: 140 SEADQAATGVAIGMGMVPLEVISETALTFQTKGYSKVSPFFVPKILVNMASGQVSIRHKLKGPNHAVSTACTTGAHAVGDSFRFVAHGDADVMVAGGTDSCISPLSLAGFARARALS-TNTDPKSACRPFHPQRDGFVMGEGAAVLVLEEHRHALRRGARVYAEIVGYGLSGDAGHITAPDP 320
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FABF_STAAN (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain N315) GN=fabF PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.086e-27 Identity = 73/184 (39.67%), Postives = 102/184 (55.43%), Query Frame = 2 Query: 11 MNELDKSKCGVLIGSGLGGMKVFYDAIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 +N+ + GV IGSG+GGM+ F A + L ++++PF VP +M + +++DLG GPN + TACAT I A + RG+A+ M+ GG+ A + + + GF A RALS N+D A RP+ RDGFVM A+ RGA IYAE G T DAYH+T P P+ Sbjct: 94 INDNTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALS-TNDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPE 276
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FABF_STAAM (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabF PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.086e-27 Identity = 73/184 (39.67%), Postives = 102/184 (55.43%), Query Frame = 2 Query: 11 MNELDKSKCGVLIGSGLGGMKVFYDAIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 +N+ + GV IGSG+GGM+ F A + L ++++PF VP +M + +++DLG GPN + TACAT I A + RG+A+ M+ GG+ A + + + GF A RALS N+D A RP+ RDGFVM A+ RGA IYAE G T DAYH+T P P+ Sbjct: 94 INDNTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALS-TNDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPE 276 The following BLAST results are available for this feature:
BLAST of CX288623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288623 ID=CX288623; Name=CX288623; organism=Citrus clementina; type=EST; length=560bpback to top |