CX288623
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: KASC1_ARATH (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1 PE=2 SV=2) HSP 1 Score: 229.95 bits (585), Expect = 6.310e-60 Identity = 110/186 (59.14%), Postives = 139/186 (74.73%), Query Frame = 2 Query: 5 DVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 D +N +DK K GVL+G+G+GG+ VF + ++ L +++++PF +P+A TNMGSA+LA+DLG MGPNYSISTACATSN+C AANHI RGEA++M+ GG+ AA+IPIGLGGFVACRALSQRN+DP ASRPWD RDGFVM HA KRGA I AE+ GG+ DA+HMT+P D Sbjct: 151 DKLNTIDKRKAGVLVGTGMGGLTVFSEGVQNLIEKGHRRISPFFIPYAITNMGSALLAIDLGLMGPNYSISTACATSNYCFYAAANHIRRGEADMMIAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKARDGFVMGEGAGVLVMESLEHAMKRGAPIVAEYLGGAVNCDAHHMTDPRAD 336
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: KASC1_HORVU (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Hordeum vulgare GN=KAS12 PE=1 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 2.030e-58 Identity = 108/186 (58.06%), Postives = 136/186 (73.12%), Query Frame = 2 Query: 5 DVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 D +LD + GVL+G+G+GG+ VF D ++ L Y+K++PF +P+A TNMGSA+LA+D+G+MGPNYSISTACATSN+C AANHI RGEA++++ GG+ AA+IPIGLGGFVACRALSQRN+DP A RPWD RDGFVM HA KR A I AE+ GG+ DAYHMT+P D Sbjct: 140 DAHVKLDVGRAGVLVGTGMGGLSVFSDGVQNLIEKGYRKISPFFIPYAITNMGSALLAIDVGFMGPNYSISTACATSNYCFYAAANHIRRGEADIIVAGGTEAAIIPIGLGGFVACRALSQRNDDPITACRPWDKERDGFVMGEGAGVLVMESLEHAMKRDAPIIAEYLGGAVNCDAYHMTDPRAD 325
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FABF_COXBU (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Coxiella burnetii GN=fabF PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 3.980e-38 Identity = 85/184 (46.20%), Postives = 109/184 (59.24%), Query Frame = 2 Query: 11 MNELDKSKCGVLIGSGLGGMKVFYDAIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 +NE + + GV IGSG+GGM +AL S +K++PF +P A NM S M+++ GPN SI TAC T I +AA I +A+ M+ GG+ A P+G+GGF A RALS RN++P KASRPWD RDGFV+ HAKKR A IYAE G + DAYHMT P P+ Sbjct: 93 INETNAPRVGVAIGSGIGGMPWIEKNYDALLTSGPRKISPFFIPGAIINMASGMVSIKYDLKGPNISIVTACTTGLHNIGHAARMIAHNDADAMIAGGTEMASTPLGIGGFAAVRALSTRNDEPEKASRPWDKGRDGFVLGEGAACVVVEELEHAKKRNATIYAEIIGFGMSGDAYHMTRPDPE 276
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FABF_VIBCH (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae GN=fabF PE=3 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 9.803e-37 Identity = 83/184 (45.11%), Postives = 112/184 (60.87%), Query Frame = 2 Query: 11 MNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 +NE + ++ GV IGSG+GG+++ +AL +K++PF VP NM + L++ G GPN +ISTAC T I +AA I G+A+ M+ GG+ A P+G+ GF A +ALS RN++P KASRPWD +RDGFV+ HAK RGAKIYAE G + DAYHMT P D Sbjct: 93 VNEENAARIGVAIGSGIGGLELIETGHQALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGIMVLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSED 276
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FABF_SYNY3 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp. (strain PCC 6803) GN=fabF PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 8.299e-36 Identity = 82/185 (44.32%), Postives = 107/185 (57.84%), Query Frame = 2 Query: 8 VMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 V+NEL+ + GVLIG+G+GG+KV D L + +PF +P NM S + A++LG GPN TACA + I +A + G A M+CGG+ AA+ P+ GF + RALS RN+DP ASRP+D +RDGFVM A RGAKIY E G + T DAYH+T P PD Sbjct: 95 VINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPD 279
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FABF_VIBHA (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi GN=fabF PE=3 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 1.849e-35 Identity = 82/184 (44.57%), Postives = 107/184 (58.15%), Query Frame = 2 Query: 11 MNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 + E + ++ GV IGSG+GG+ + AL +K++PF VP NM + L++ G GPN +ISTAC T I +AA I G+A M+ GG+ A P+G+ GF A +ALS RN++P KASRPWD RDGFV+ HAK RGAKIYAE G + DAYHMT P D Sbjct: 93 ITEENAARVGVAIGSGIGGLDLIEAGHSALVEKGPRKVSPFFVPSTIVNMVAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDAEAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKGRDGFVLGDGAGVMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSED 276
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FABF_SHIFL (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Shigella flexneri GN=fabF PE=3 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 1.565e-34 Identity = 80/181 (44.20%), Postives = 109/181 (60.22%), Query Frame = 2 Query: 11 MNELDKSKCGVLIGSGLGGMKVFYDAIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEP 550 + E + ++ G IGSG+GG+ + + +L +K++PF VP NM + L + G GP+ SI+TAC + I +AA I G+A++M+ GG+ A P+G+GGF A RALS RN++P ASRPWD RDGFV+ HAKKRGAKIYAE G +SDAYHMT P Sbjct: 93 ITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSP 273
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FABF_ECOLI (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli (strain K12) GN=fabF PE=1 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 1.565e-34 Identity = 80/181 (44.20%), Postives = 109/181 (60.22%), Query Frame = 2 Query: 11 MNELDKSKCGVLIGSGLGGMKVFYDAIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEP 550 + E + ++ G IGSG+GG+ + + +L +K++PF VP NM + L + G GP+ SI+TAC + I +AA I G+A++M+ GG+ A P+G+GGF A RALS RN++P ASRPWD RDGFV+ HAKKRGAKIYAE G +SDAYHMT P Sbjct: 93 ITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSP 273
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FABF_ECOL6 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli O6 GN=fabF PE=3 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 1.565e-34 Identity = 80/181 (44.20%), Postives = 109/181 (60.22%), Query Frame = 2 Query: 11 MNELDKSKCGVLIGSGLGGMKVFYDAIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEP 550 + E + ++ G IGSG+GG+ + + +L +K++PF VP NM + L + G GP+ SI+TAC + I +AA I G+A++M+ GG+ A P+G+GGF A RALS RN++P ASRPWD RDGFV+ HAKKRGAKIYAE G +SDAYHMT P Sbjct: 93 ITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSP 273
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FABF_ECO57 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli O157:H7 GN=fabF PE=3 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 1.565e-34 Identity = 80/181 (44.20%), Postives = 109/181 (60.22%), Query Frame = 2 Query: 11 MNELDKSKCGVLIGSGLGGMKVFYDAIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEP 550 + E + ++ G IGSG+GG+ + + +L +K++PF VP NM + L + G GP+ SI+TAC + I +AA I G+A++M+ GG+ A P+G+GGF A RALS RN++P ASRPWD RDGFV+ HAKKRGAKIYAE G +SDAYHMT P Sbjct: 93 ITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSP 273 The following BLAST results are available for this feature:
BLAST of CX288623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288623 ID=CX288623; Name=CX288623; organism=Citrus clementina; type=EST; length=560bpback to top |