CX288623
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FABF_BACSU (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis GN=fabF PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.128e-27 Identity = 72/177 (40.68%), Postives = 97/177 (54.80%), Query Frame = 2 Query: 32 KCGVLIGSGLGGMKVFYDAIEA-LRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 + GV +GSG+GG++ E L ++++PF VP +M + +++ LG G N TACAT I +A I RG+A++M+ GG+ A + + GF A +ALS N DP ASRP+D NRDGFVM HA RGAKIY E G T DAYH+T P D Sbjct: 100 RVGVWVGSGIGGLETLESQFEIFLTKGPRRVSPFFVPMMIPDMATGQISIALGAKGVNSCTVTACATGTNSIGDAFKVIQRGDADVMVTGGTEAPLTRMSFAGFSANKALST-NPDPKTASRPFDKNRDGFVMGEGAGIIVLEELEHALARGAKIYGEIVGYGSTGDAYHITAPAQD 275
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: OXSM_MOUSE (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Mus musculus GN=Oxsm PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.391e-27 Identity = 67/182 (36.81%), Postives = 99/182 (54.40%), Query Frame = 2 Query: 17 ELDKSKCGVLIGSGLGGMKVFYDAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 E D+ GV IG G+ ++V + + Y K++PF VP NM + +++ GPN+S+STAC T + ++ I G+A++M+ GG+++ + P+ L GF RALS N DP A RP+ RDGFVM HA +RGA+IYAE G + DA H+T P P+ Sbjct: 140 EADQVATGVAIGMGMVPLEVISETALLFQTKGYNKVSPFFVPKILINMAAGQVSIRYKLKGPNHSVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSS-NPDPKLACRPFHPERDGFVMGEGAAVLVLEEHEHAVQRGARIYAEILGYGLSGDAGHITAPDPE 320
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: OXSM_HUMAN (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Homo sapiens GN=OXSM PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.495e-26 Identity = 66/183 (36.07%), Postives = 101/183 (55.19%), Query Frame = 2 Query: 14 NELDKSKCGVLIGSGLGGMKVFYD-AIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 +E D+ GV IG G+ ++V + A+ Y K++PF VP NM + +++ GPN+++STAC T + ++ I G+A++M+ GG+++ + P+ L GF RALS N+DP A RP+ RDGFVM HA +R A+IYAE G + DA H+T P P+ Sbjct: 139 SEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALS-TNSDPKLACRPFHPKRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPE 320
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: OXSM_SCHPO (Putative 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Schizosaccharomyces pombe GN=SPBC887.13c PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.918e-24 Identity = 64/185 (34.59%), Postives = 100/185 (54.05%), Query Frame = 2 Query: 11 MNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNND-PTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 ++E +K GV G+G+G + + L + +K++P + NM + ++ G+ N++ +TACA I +A N I G A++++ GGS + + P+ + GF R+LS + ND P ASRP+D NRDGFV+ HAK R A IYAE G SD+YH+T P+P+ Sbjct: 99 IDEQEKLATGVCFGTGIGNLDDALNENGVLNKAGIRKVSPRVISKILINMPAGYISQRYGFTALNHTTTTACAAGCHAIGDAFNFIKLGHADVIIAGGSESCINPLTVAGFSKARSLSTKFNDNPKAASRPFDANRDGFVIGEGSAALVLEELEHAKNRNAHIYAEIVGYGLASDSYHITAPNPN 283
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FAB1_MYCLE (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Mycobacterium leprae GN=kasA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.504e-24 Identity = 62/182 (34.07%), Postives = 95/182 (52.20%), Query Frame = 2 Query: 17 ELDKSKCGVLIGSGLGGMKVFYDAIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 E+D + V++G+GLGG + ++ + + +K++P V N +A + + LG + +AC++ + I +A II G+A++ +CGG + + + F RA+S RN+DP ASRP+D NRDGFV HAK RGAK A G TSDA+HM P D Sbjct: 102 EVDPDRFTVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAATVGLQLGACAGVMTPVSACSSGSEAIAHAWRQIIMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDDPEGASRPFDKNRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAAD 283
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FAB1_MYCTU (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Mycobacterium tuberculosis GN=kasA PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.271e-24 Identity = 59/182 (32.42%), Postives = 97/182 (53.30%), Query Frame = 2 Query: 17 ELDKSKCGVLIGSGLGGMKVFYDAIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 E+D + V++G+GLGG + ++ + + +K++P V N +A++ + LG + +AC++ + I +A I+ G+A++ +CGG + + + F RA+S RN++P +ASRP+D +RDGFV HAK RGAK A G TSDA+HM P D Sbjct: 102 EVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAAD 283
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FAB1_MYCBO (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Mycobacterium bovis GN=kasA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.271e-24 Identity = 59/182 (32.42%), Postives = 97/182 (53.30%), Query Frame = 2 Query: 17 ELDKSKCGVLIGSGLGGMKVFYDAIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 E+D + V++G+GLGG + ++ + + +K++P V N +A++ + LG + +AC++ + I +A I+ G+A++ +CGG + + + F RA+S RN++P +ASRP+D +RDGFV HAK RGAK A G TSDA+HM P D Sbjct: 102 EVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAAD 283
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: CEM1_YEAST (3-oxoacyl-[acyl-carrier-protein] synthase homolog OS=Saccharomyces cerevisiae GN=CEM1 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.795e-22 Identity = 59/174 (33.91%), Postives = 90/174 (51.72%), Query Frame = 2 Query: 38 GVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 G LIGSG+G ++ Y K++NP+ VP TNM + +++ G ++S+STACAT N I +A N I G ++ + G S ++ P+ L GF+ ++++ SRP+D R GFV+ HA+KR A I +E G +SDA H+T P D Sbjct: 126 GCLIGSGIGSIQDIYQTSLQFHNDNKRINPYFVPKILTNMAAGNVSIKFNLRGLSHSVSTACATGNNSIGDAFNFIRLGMQDICVAGASETSLHPLSLAGFIRAKSITTNG-----ISRPFDTQRSGFVLGEGCGMIVMESLEHAQKRNANIISELVGYGLSSDACHITSPPAD 294
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FAB2_MYCTU (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Mycobacterium tuberculosis GN=kasB PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.089e-19 Identity = 59/183 (32.24%), Postives = 88/183 (48.09%), Query Frame = 2 Query: 17 ELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACR-ALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 E+D ++ V IG+GLG + + + +R K ++P V N +A + ++ + +ACA+ I A I+ GEA+ +CGG + + + GF R +S N+DP A RP+D +RDGFV HAK RGA I A G S TSD +HM P P+ Sbjct: 101 EVDTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPN 283
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FAB2_MYCBO (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Mycobacterium bovis GN=kasB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.089e-19 Identity = 59/183 (32.24%), Postives = 88/183 (48.09%), Query Frame = 2 Query: 17 ELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACR-ALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 E+D ++ V IG+GLG + + + +R K ++P V N +A + ++ + +ACA+ I A I+ GEA+ +CGG + + + GF R +S N+DP A RP+D +RDGFV HAK RGA I A G S TSD +HM P P+ Sbjct: 101 EVDTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPN 283 The following BLAST results are available for this feature:
BLAST of CX288623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288623 ID=CX288623; Name=CX288623; organism=Citrus clementina; type=EST; length=560bpback to top |