CX288623
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: NOE4_RHIME (Nodulation protein E OS=Rhizobium meliloti GN=nodE PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.278e-16 Identity = 55/179 (30.73%), Postives = 86/179 (48.04%), Query Frame = 2 Query: 14 NELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEP 550 NE + + G +G GLGG A + + F A + + ++M LG GP + +++AC+++N I +A + I G A++ML GGS+A ++ I L + A RAL+ RP+ R G V+ HA RGA I AE G ++DA+H+T P Sbjct: 92 NEGNALRFGATVGVGLGGWDATEKAYRPSLSTGGRTEIFTGVKAMPSAAACQVSMSLGLRGPVFGVTSACSSANHAIASAVDQIKCGRADVMLAGGSDAPLVWIVLKAWEAMRALA------PDTCRPFSAGRKGVVLGEGAGMAVLESYEHATARGATILAEVAGVGLSADAFHITAP 264
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: NODE_RHIME (Nodulation protein E OS=Rhizobium meliloti GN=nodE PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.278e-16 Identity = 56/180 (31.11%), Postives = 87/180 (48.33%), Query Frame = 2 Query: 14 NELDKSKCGVLIGSGLGGMKVFYDAIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEP 550 NE + + G +G GLGG A L + + F A + + ++M LG GP + +++AC+++N I +A + I G A++ML GGS+A ++ I L + A RAL+ RP+ R G V+ HA RGA I AE G ++DA+H+T P Sbjct: 92 NEGNALRFGATVGVGLGGWDATEKAYRTLLVDGGTRTEIFTGVKAMPSAAACQVSMSLGLRGPVFGVTSACSSANHAIASAVDQIKCGRADVMLAGGSDAPLVWIVLKAWEAMRALA------PDTCRPFSAGRKGVVLGEGAGMAVLESYEHATARGATILAEVAGVGLSADAFHITAP 265
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: KASA_STRCO (Actinorhodin polyketide putative beta-ketoacyl synthase 1 OS=Streptomyces coelicolor GN=SCO5087 PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 3.278e-16 Identity = 55/182 (30.22%), Postives = 86/182 (47.25%), Query Frame = 2 Query: 20 LDKSKCGVLIGSGLGGMK-------VFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMT 544 LD ++ GV +GS + + D+ + ++ + ++ A +A +G GP +ST C + + NA I G A++M G ++ + PI + F A RA + RN+DP ASRP+D RDGFV+ A RGA+I+AE G + +AYHMT Sbjct: 138 LDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMT 319
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: KAS1_STRVN (Granaticin polyketide putative beta-ketoacyl synthase 1 OS=Streptomyces violaceoruber GN=gra-orf1 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.246e-15 Identity = 55/182 (30.22%), Postives = 85/182 (46.70%), Query Frame = 2 Query: 20 LDKSKCGVLIGSGLGGMK-------VFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMT 544 LD S+ GV +GS + V D+ + ++P + + + A +A G GP +S C + + A G A++++ G ++ V PI + F A +A + RN+DP ASRP+D R+GFV+ A++RGA IYAE G + S AYHMT Sbjct: 95 LDPSRIGVALGSAVASATSLENEYLVMSDSGREWLVDPAHLSPMMFDYLSPGVMPAEVAWAAGAEGPVTMVSDGCTSGLDSVGYAVQGTREGSADVVVAGAADTPVSPIVVACFDAIKATTPRNDDPAHASRPFDGTRNGFVLAEGAAMFVLEEYEAAQRRGAHIYAEVGGYATRSQAYHMT 276
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: NODE_RHILV (Nodulation protein E OS=Rhizobium leguminosarum bv. viciae GN=nodE PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 3.625e-15 Identity = 54/180 (30.00%), Postives = 85/180 (47.22%), Query Frame = 2 Query: 14 NELDKSKCGVLIGSGLGGMKVFYDAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEP 550 NE + + G +G G GG A L + + F A + + ++M+LG GP + ++ACA++N I +A + I G A++ML GGS+A ++ I L + A R L+ RP+ +R G V+ HA RGA + AE G ++DAYH+ P Sbjct: 92 NEGNAHRFGATVGVGFGGWDATEKAYRTLLLGGATRTELFTGVKAMPSAAACQVSMNLGLRGPVFGATSACASANHAIASAVDQIKLGRADVMLAGGSDAPLVWIVLKAWEAMRVLA------PDTCRPFSADRKGLVLGEGAGMAVLESYEHAAARGATMLAEVAGIGLSADAYHIAAP 265
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FABB_BUCBP (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=fabB PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.734e-15 Identity = 59/176 (33.52%), Postives = 87/176 (49.43%), Query Frame = 2 Query: 32 KCGVLIGSGLGGMKVFYDAIEALRIS--YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALS-QRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEP 550 + GV+IGS G + + + ++ + K ++P+ V + T+ SA L+ G NYSIS+ACATS CI NA I G+ +L+ GG + F + ALS N+ P +SR +D RDGFV+ +A R A IYAE G +SD Y++ P Sbjct: 99 RVGVIIGSSSGSPRCQINGVSIIKKTKRLKSVSPYTVIKSMTSSISACLSTLFKIQGVNYSISSACATSAHCIGNAMELIQLGKQDLIFAGGGEELSWELAC-AFDSMGALSTMYNSQPILSSRVFDYYRDGFVISGGAGILVVEELNYALSRSAHIYAEIVGYGTSSDGYNVVVP 273
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: FABB_BUCAI (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=fabB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.799e-14 Identity = 63/180 (35.00%), Postives = 86/180 (47.78%), Query Frame = 2 Query: 32 KCGVLIGSGLGGMK-VFYDAIEALRISY--KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 559 + G++ GSG K I ++ + K ++P+ + SA L+ G YSIS+ACATS CI NA I G +L+ GG + + + F A RALS NNDP KASR +D+ RDGFV+ A R A IYAE G + TSD ++ P D Sbjct: 98 RVGLISGSGCSFSKNTLTSDIHLMKNKHISKGISPYLAVKTMPSGISACLSTLFKIYGVTYSISSACATSAHCIGNAFELIQFGRQDLIFAGGGEEISLELAMQ-FDAMRALSTCFNNDPKKASRVYDVYRDGFVISGGAGMLVIEELNSALSRSAYIYAEIIGYAATSDGSNIVVPSGD 276
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: NODE_RHIS3 (Nodulation protein E OS=Rhizobium sp. (strain N33) GN=nodE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.836e-14 Identity = 49/180 (27.22%), Postives = 88/180 (48.89%), Query Frame = 2 Query: 14 NELDKSKCGVLIGSGLGGMKVFYDAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEP 550 +E + + G ++G G G + + AL ++ ++ VP A + + ++M LG GP + +++ACA++N I +A + I G A++ML GGS+A + + + A R ++ RP+ +R G V+ HA RGA I AE G ++DA+++ P Sbjct: 92 DERNAYRFGAIVGVGGSGWEAIEASYRALLLNGARRAGVMDVPKAMPSAAAGQVSMSLGLRGPVFGVTSACASANHAIASAVDQIRCGRADVMLAGGSDAPFVFCVVKAWEAMRVIA------PDTCRPFSSDRRGLVLGEGAGMAVLESYEHATARGATIIAEIAGIGLSADAFNLVSP 265
BLAST of CX288623 vs. ExPASy Swiss-Prot
Match: KAS1_STRCM (Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces cinnamonensis PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.523e-13 Identity = 51/178 (28.65%), Postives = 85/178 (47.75%), Query Frame = 2 Query: 32 KCGVLIGSGLGGM-------KVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANLMLCGGSNAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMT 544 + GV++GS +G +V D + ++ P + + +A +A +G GP+ +ST C + + A + G ++M+ G +A + PI A +A + R++ P ASRP+D R+GFV+ A++RGA IYAE G + S+AYHMT Sbjct: 99 RIGVVVGSAVGATMGLDNEYRVVSDGGRLDLVDHRYAVPHLYNYLVPSSFAAEVAWAVGAEGPSTVVSTGCTSGIDAVGIAVELVREGSVDVMVAGAVDAPISPIPCV-LDAIKATTPRHDAPATASRPFDSTRNGFVLGEGAAFFVLEELHSARRRGAHIYAEIAGYATRSNAYHMT 275 The following BLAST results are available for this feature:
BLAST of CX288623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288623 ID=CX288623; Name=CX288623; organism=Citrus clementina; type=EST; length=560bpback to top |