CX288972

Overview
NameCX288972
Unique NameCX288972
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length589
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288972 vs. ExPASy Swiss-Prot
Match: YGHA_ECO57 (Uncharacterized oxidoreductase yghA OS=Escherichia coli O157:H7 GN=yghA PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.789e-24
Identity = 62/189 (32.80%), Postives = 105/189 (55.56%), Query Frame = 2
Query:   11 TNMASNNQPPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRKAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAEQYECGSVEDIDESRLERVFRTNIFSYFFMARHALKHMKAGSSIINTTSVNAYK 577
            T   +   P QKQ T PG +  M P+P      Y  S +L+   ALVTGGDSGIGRA    +A+EGA VA +Y+ P E++DA++  +++ +      +  + +  DL  ++  + +V E   A G +DI+   A +Q     + D+   + ++ F  N+F+ F++ + A+  +  G+SII T+S+ AY+
Sbjct:    9 TQYYTGEYPKQKQPT-PGIQAKMTPVPDCGEKTYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYL-PVEEEDAQDVKKIIEEC----GRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQ 191          
BLAST of CX288972 vs. ExPASy Swiss-Prot
Match: Y182_METEA (Uncharacterized oxidoreductase MexAM1_META1p0182 OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=MexAM1_META1p0182 PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 4.313e-17
Identity = 49/148 (33.11%), Postives = 77/148 (52.03%), Query Frame = 2
Query:  122 NKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRKAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAEQYECGSVEDIDESRLERVFRTNIFSYFFMARHALKHMKAGSSIINTTSV 565
            +KL G VA+VTG   GIG A+    A++GA V   Y   +   DA      + +A T      +A+ AD+      + +V+  V  +G++D+LVNN+   YE  ++E++ E    R+F  N+       + A KH+  G SIIN +SV
Sbjct:    2 SKLEGKVAVVTGASKGIGAAIAKALAKDGAAVVVNYASSKAGADA------VVEAITAAGGKAIAVQADVSQAVQARGLVEAAVQQFGRLDVLVNNSG-VYEFAAIEEVTEEHYRRIFDVNVLGVLLATQAASKHLGEGGSIINISSV 142          
BLAST of CX288972 vs. ExPASy Swiss-Prot
Match: VER1_ASPPA (Versicolorin reductase OS=Aspergillus parasiticus GN=ver1 PE=3 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 9.609e-17
Identity = 54/151 (35.76%), Postives = 82/151 (54.30%), Query Frame = 2
Query:  119 SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRKAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAEQYECGSVEDIDESRLERVFRTNIFSYFFMARHALKHMKAGSSIINTTSVNA 571
            +++L G VALVTG   GIG A+     + GA V   Y   +E   A++ +E ++   T    D +AI AD+G  E   +++ E V  +G +DI+ +NA      G ++D+     +RVFR N    FF+AR A +HM+ G  II T+S  A
Sbjct:    4 NHRLDGKVALVTGAGRGIGAAIAVALGERGAKVVVNYAHSREA--AEKVVEQIKANGT----DAIAIQADVGDPEATAKLMAETVRHFGYLDIVSSNAGI-VSFGHLKDVTPEEFDRVFRVNTRGQFFVAREAYRHMREGGRIILTSSNTA 147          
BLAST of CX288972 vs. ExPASy Swiss-Prot
Match: STCU_EMENI (Versicolorin reductase OS=Emericella nidulans GN=stcU PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.141e-16
Identity = 51/149 (34.23%), Postives = 81/149 (54.36%), Query Frame = 2
Query:  125 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRKAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAEQYECGSVEDIDESRLERVFRTNIFSYFFMARHALKHMKAGSSIINTTSVNA 571
            +L G VALVTG   GIG A+     Q GA V   Y   +E   A++ ++ ++     +  D ++I AD+G  +   +++D+ V  +G +DI+ +NA      G V+D+     +RVFR N    FF+AR A +H++ G  II T+S  A
Sbjct:    8 RLDGKVALVTGAGRGIGAAIAVALGQRGAKVVVNYANSREA--AEKVVDEIKS----NGSDAISIQADVGDPDAVTKLMDQAVEHFGYLDIVSSNAGI-VSFGHVKDVTPDEFDRVFRVNTRGQFFVAREAYRHLREGGRIILTSSNTA 149          
BLAST of CX288972 vs. ExPASy Swiss-Prot
Match: T4HR_MAGGR (Tetrahydroxynaphthalene reductase OS=Magnaporthe grisea GN=MGG_02252 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 4.769e-16
Identity = 59/179 (32.96%), Postives = 86/179 (48.04%), Query Frame = 2
Query:   53 TQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRKAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAEQYECGSVEDIDESRLERVFRTNIFSYFFMARHALKHMKAGSSIINTTSVNAYKGNAK 589
            TQP  E   + IP    P    S  L G VALVTG   GIGR +     + G  V   Y    E   A+E +  ++K    +  D   + A++G  E+  R+ +E V  +GK+DI+ +N+      G V+D+     +RVF  N    FF+AR A KH++ G  +I   S+    G AK
Sbjct:    5 TQPRGESKYDAIPGPLGPQ---SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTES--AEEVVAAIKK----NGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV-VSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSIT---GQAK 170          
BLAST of CX288972 vs. ExPASy Swiss-Prot
Match: Y019_THEMA (Uncharacterized oxidoreductase TM_0019 OS=Thermotoga maritima GN=TM_0019 PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 2.893e-13
Identity = 53/155 (34.19%), Postives = 78/155 (50.32%), Query Frame = 2
Query:  128 LRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRKAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAEQYECGSVEDIDESRL---ERVFRTNIFSYFFMARHALKHM--KAGSSIINTTSVNAYK 577
            L G VA+VTGG  GIG A+   FA+ G  V    +   +++   E  EMLR+       D   +  D+  + + K +V + V  YG +D+LVNNAA      SV+ I E  L   ERV R N+   +  +R+  + M  + G  IIN  S  A++
Sbjct:    2 LEGKVAVVTGGGQGIGAAIAQLFAENGMKVVIAEI---DEEAGVEREEMLRER----GLDVTFVKTDVADENSVKNMVRKTVEIYGGVDVLVNNAAVM----SVKSIFERPLEEWERVIRVNLTGPYICSRYCAEEMIKRGGGVIINIASTRAFQ 145          
BLAST of CX288972 vs. ExPASy Swiss-Prot
Match: THR1_GLOLA (Trihydroxynaphthalene reductase OS=Glomerella lagenarium GN=THR1 PE=3 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 1.875e-12
Identity = 49/157 (31.21%), Postives = 77/157 (49.04%), Query Frame = 2
Query:  119 SNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRKAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAEQYECGSVEDIDESRLERVFRTNIFSYFFMARHALKHMKAGSSIINTTSVNAYKGNAK 589
            S  L G VALVTG   GIGR +     + GA V   Y    E   A+E ++ ++K+      D  +I A++   +   ++  E    +G++DI+ +N+      G V+D+     +RVF  N    FF+AR A KH++ G  +I   S+    G AK
Sbjct:   24 SASLMGKVALVTGAGRGIGREMAMELGRRGAKVIVNYANSAET--AEEVVQAIKKS----GSDAASIKANVSDVDQIVKMFGEAKQIWGRLDIVCSNSGV-VSFGHVKDVTPEEFDRVFAINTRGQFFVAREAYKHLEVGGRLILMGSIT---GQAK 170          
BLAST of CX288972 vs. ExPASy Swiss-Prot
Match: YGFF_ECOLI (Uncharacterized oxidoreductase ygfF OS=Escherichia coli (strain K12) GN=ygfF PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 3.199e-12
Identity = 52/154 (33.77%), Postives = 79/154 (51.30%), Query Frame = 2
Query:  140 VALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRKAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYGK-IDILVNNAAEQYECGSVEDIDESRLERVFRTNIFSYFFMARHALKHMK-----AGSSIINTTSVNAYKGN 583
            +ALVTGG  GIGRA     AQEG TVA  Y   Q    A+E + ++ +A          + AD+  DEN    +   ++ + + +  LVNNA   +   +VE++   R+ RV  TN+  YF   R A+K M      +G +I+N +SV +  G+
Sbjct:    3 IALVTGGSRGIGRATALLLAQEGYTVAVNY--QQNLHAAQEVMNLITQA----GGKAFVLQADIS-DENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKNGGSGGAIVNVSSVASRLGS 149          
BLAST of CX288972 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.127e-12
Identity = 44/146 (30.14%), Postives = 78/146 (53.42%), Query Frame = 2
Query:  131 RGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRKAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAEQYECGSVEDIDESRLERVFRTNIFSYFFMARHALKHMK--AGSSIINTTS 562
            +G V L+TG  SGIG+     FA+ GA VA   +    ++  KET+E+++        +   I  D+  D   +++V + V  +G++DILVNNA      G++E+  E   ++    N+   F ++++A++ MK   G  I+N +S
Sbjct:    4 QGKVVLITGAGSGIGKKAAVMFAERGAKVAINDI---SEEKGKETVELIKSM----GGEAAFIFGDVAKD--AEQIVKKTVETFGRLDILVNNAG-IVPYGNIEETSEEDFDKTMAVNVKGPFLLSKYAVEQMKKQGGGVIVNVSS 139          
BLAST of CX288972 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.307e-12
Identity = 54/157 (34.39%), Postives = 79/157 (50.32%), Query Frame = 2
Query:  125 KLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRKAK--TPDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAEQYECGSVEDIDESRLERVFRTNIFSYFFMARHALKHM--KAGSSIINTTSVNAYKGN 583
            +L G V L+TG  SGIG+A    FAQEGATV    +       +KE L+ L K     P   DP  +  ++   +  K VV++VV  YG+ID+LVNNA    +   V  + E   + V   N+   F + +  + +M  +   SI+N +SV    GN
Sbjct:    2 RLEGKVCLITGAASGIGKATTLLFAQEGATVIAGDI-------SKENLDSLVKEAEGLPGKVDPYVL--NVTDRDQIKEVVEKVVQKYGRIDVLVNNAGITRDALLVR-MKEEDWDAVINVNLKGVFNVTQMVVPYMIKQRNGSIVNVSSVVGIYGN 148          
The following BLAST results are available for this feature:
BLAST of CX288972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
YGHA_ECO572.789e-2432.80Uncharacterized oxidoreductase yghA OS=Escherichia... [more]
Y182_METEA4.313e-1733.11Uncharacterized oxidoreductase MexAM1_META1p0182 O... [more]
VER1_ASPPA9.609e-1735.76Versicolorin reductase OS=Aspergillus parasiticus ... [more]
STCU_EMENI2.141e-1634.23Versicolorin reductase OS=Emericella nidulans GN=s... [more]
T4HR_MAGGR4.769e-1632.96Tetrahydroxynaphthalene reductase OS=Magnaporthe g... [more]
Y019_THEMA2.893e-1334.19Uncharacterized oxidoreductase TM_0019 OS=Thermoto... [more]
THR1_GLOLA1.875e-1231.21Trihydroxynaphthalene reductase OS=Glomerella lage... [more]
YGFF_ECOLI3.199e-1233.77Uncharacterized oxidoreductase ygfF OS=Escherichia... [more]
Y325_THEMA7.127e-1230.14Uncharacterized oxidoreductase TM_0325 OS=Thermoto... [more]
FABG_THEMA9.307e-1234.393-oxoacyl-[acyl-carrier-protein] reductase OS=Ther... [more]

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Properties
Property NameValue
Genbank descriptionC02007E08SK IF1 Citrus clementina cDNA clone C02007E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288972 ID=CX288972; Name=CX288972; organism=Citrus clementina; type=EST; length=589bp
GTTGAGTGTGACGAACATGGCTTCTAATAACCAGCCTCCTCAGAAGCAGG
ACACTCAGCCTGGCAAAGAGCATGTTATGAATCCCATTCCTCAATTCACC
AGCCCTGATTACACCCCTTCTAATAAACTTCGTGGGATGGTAGCCCTGGT
GACCGGAGGCGACTCCGGGATCGGGAGAGCAGTGTGCCACTGCTTTGCAC
AAGAAGGGGCGACCGTGGCTTTCACCTACGTGAAACCTCAAGAGGACAAA
GATGCAAAGGAGACACTTGAGATGTTGAGGAAGGCTAAGACCCCGGATGC
CAAAGACCCCATGGCAATATCAGCAGATTTAGGATTTGATGAGAATTGCA
AGAGGGTTGTCGACGAAGTTGTGAATGCTTATGGCAAGATTGATATTCTT
GTCAACAATGCAGCAGAGCAGTATGAATGTGGGTCGGTTGAGGATATTGA
TGAATCAAGACTTGAGAGAGTGTTTAGGACTAATATCTTCTCTTACTTCT
TCATGGCTAGGCATGCGCTGAAGCATATGAAGGCAGGGAGTTCAATAATC
AACACAACATCAGTGAATGCATACAAGGGGAACGCGAAG
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