CX288972
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288972 vs. ExPASy Swiss-Prot
Match: GRDH_DAUCA (Glucose and ribitol dehydrogenase OS=Daucus carota GN=CAISE5 PE=2 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.008e-82 Identity = 148/192 (77.08%), Postives = 172/192 (89.58%), Query Frame = 2 Query: 17 MASNNQ-PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRKAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAEQYECGSVEDIDESRLERVFRTNIFSYFFMARHALKHMKAGSSIINTTSVNAYKGNAK 589 MAS Q PPQKQ++QPGKEH+M+P PQ SP Y P+NKL+G VALVTGGDSGIGR+VC+ FA EGATVAFT+VK EDKDA ETLE+LRKAK+ DAKDP+AI+ADLGFD+NCK+VVD+VVNA+G ID+LVNNAAEQY+ +VEDIDE RLERVFRTNIF+YFFMARHALKHM+ GS+IINTTS+NAYKGNAK Sbjct: 1 MASGGQFPPQKQESQPGKEHLMDPSPQHASPHYKPANKLQGKVALVTGGDSGIGRSVCYHFALEGATVAFTFVKGHEDKDANETLELLRKAKSSDAKDPIAIAADLGFDDNCKKVVDQVVNAFGSIDVLVNNAAEQYKASTVEDIDEERLERVFRTNIFAYFFMARHALKHMREGSTIINTTSINAYKGNAK 192
BLAST of CX288972 vs. ExPASy Swiss-Prot
Match: GRDH1_ARATH (Glucose and ribitol dehydrogenase homolog 1 OS=Arabidopsis thaliana GN=At1g54870 PE=1 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 2.745e-80 Identity = 143/182 (78.57%), Postives = 162/182 (89.01%), Query Frame = 2 Query: 41 QKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRKAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAEQYECGSVEDIDESRLERVFRTNIFSYFFMARHALKHMKAGSSIINTTSVNAYKGNA 586 QKQ QPGKEHVM PQF+S DY PSNKLRG VAL+TGGDSGIGRAV +CFA EGATVAFTYVK QE+KDA+ETL+ML++ KT D+K+P+AI DLGFDENCKRVVDEVVNA+G+ID+L+NNAAEQYE ++E+IDE RLERVFRTNIFSYFF+ RHALKHMK GSSIINTTSVNAYKGNA Sbjct: 6 QKQHAQPGKEHVMESSPQFSSSDYQPSNKLRGKVALITGGDSGIGRAVGYCFASEGATVAFTYVKGQEEKDAQETLQMLKEVKTSDSKEPIAIPTDLGFDENCKRVVDEVVNAFGRIDVLINNAAEQYESSTIEEIDEPRLERVFRTNIFSYFFLTRHALKHMKEGSSIINTTSVNAYKGNA 187
BLAST of CX288972 vs. ExPASy Swiss-Prot
Match: GRDH2_ARATH (Glucose and ribitol dehydrogenase homolog 2 OS=Arabidopsis thaliana GN=At3g05260 PE=2 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 2.488e-73 Identity = 132/184 (71.74%), Postives = 161/184 (87.50%), Query Frame = 2 Query: 35 PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRKAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAEQYECGSVEDIDESRLERVFRTNIFSYFFMARHALKHMKAGSSIINTTSVNAYKGNA 586 PPQKQ+TQPG +HVM P P+F+S +Y PSNKL G VALVTGGDSGIG+AVCHC+A EGA+VAFTYVK +EDKDA+ETL +L + KT +AK+P+ I+ DLGF+ENCKRVV+EVVN++G+ID+LVN AAEQ+E S+EDIDE+RLERVFRTNIFS FF+ ++ALKHMK GSSIINTTSV AY GN+ Sbjct: 6 PPQKQETQPGIQHVMEPTPEFSSSNYKPSNKLHGKVALVTGGDSGIGKAVCHCYALEGASVAFTYVKGREDKDAEETLRLLHEVKTREAKEPIMIATDLGFEENCKRVVEEVVNSFGRIDVLVNCAAEQHEV-SIEDIDEARLERVFRTNIFSQFFLVKYALKHMKEGSSIINTTSVVAYAGNS 188
BLAST of CX288972 vs. ExPASy Swiss-Prot
Match: GRDH_ORYSJ (Glucose and ribitol dehydrogenase homolog OS=Oryza sativa subsp. japonica GN=Os05g0140800 PE=2 SV=2) HSP 1 Score: 253.832 bits (647), Expect = 4.545e-67 Identity = 134/200 (67.00%), Postives = 155/200 (77.50%), Query Frame = 2 Query: 17 MASNNQPPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLR--KAKTPDAKDPMAISADLGFDENCKRVVDEVVNAY-GKIDILVNNAAEQYECGSVEDIDESRLERVFRTNIFSYFFMARHALKHMK--------AGSSIINTTSVNAYKGN 583 MAS PPQ Q+TQPGKEH M+P P+ Y P+NKL+ VA+VTGGDSGIGRAVC CFA EGATVAFTYVK QE+KDA+ETL LR +A+T AKDPMAI ADLG+D+NC++VVDEV AY G IDILVNNAAEQYE S+ DI E LERVFRTNIFSYFFM++HA+K M+ G SIINT+S+NAYKGN Sbjct: 1 MASQQFPPQNQETQPGKEHAMDPRPEAIIQSYKPANKLKDKVAIVTGGDSGIGRAVCLCFALEGATVAFTYVKGQEEKDAEETLRALRDIRART-GAKDPMAIPADLGYDDNCRKVVDEVAGAYGGAIDILVNNAAEQYERPSITDITEDDLERVFRTNIFSYFFMSKHAVKRMRDRRGGAGAGGCSIINTSSINAYKGN 199
BLAST of CX288972 vs. ExPASy Swiss-Prot
Match: YHDF_BACSU (Uncharacterized oxidoreductase yhdF OS=Bacillus subtilis GN=yhdF PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.511e-41 Identity = 87/187 (46.52%), Postives = 121/187 (64.71%), Query Frame = 2 Query: 23 SNNQPPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRKAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAEQYECGSVEDIDESRLERVFRTNIFSYFFMARHALKHMKAGSSIINTTSVNAYKGN 583 + Q PQ QD QPG E MNP+P DY S KL+G VA++TGGDSGIGRA FA+EGA ++ Y+ E DA+ET + + K + I D+G + +C++ V + V+ +GK+DILVNNAAEQ+ S+ +I +LE+ FRTNIFS F M + AL H++ G +IINTTS+ AY+G+ Sbjct: 8 TEGQEPQHQDRQPGIESKMNPLPLSEDEDYRGSGKLKGKVAIITGGDSGIGRAAAIAFAKEGADISILYL--DEHSDAEETRKRIEKENVRC----LLIPGDVGDENHCEQAVQQTVDHFGKLDILVNNAAEQHPQDSILNISTEQLEKTFRTNIFSMFHMTKKALPHLQEGCAIINTTSITAYEGD 188
BLAST of CX288972 vs. ExPASy Swiss-Prot
Match: GS39_BACSU (General stress protein 39 OS=Bacillus subtilis GN=ydaD PE=1 SV=3) HSP 1 Score: 159.458 bits (402), Expect = 1.167e-38 Identity = 82/183 (44.81%), Postives = 113/183 (61.75%), Query Frame = 2 Query: 35 PPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRKAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAEQYECGSVEDIDESRLERVFRTNIFSYFFMARHALKHMKAGSSIINTTSVNAYKGN 583 P Q Q QPG E MNP P + DY ++KL+G VAL+TGGDSGIGRAV +A+EGA +A Y KD E E +K + + I+ D+G +E C V++ V G +DILVNNA EQ+ S++DI +L R F+TN +S F++ + A+ ++K GS+IINTTS+N Y GN Sbjct: 9 PAQTQSRQPGIESEMNPSPVYEYEDYKGADKLKGKVALITGGDSGIGRAVSVAYAKEGADIAIVY------KDEHEDAEETKKRVEQEGVKCLLIAGDVGEEEFCNEAVEKTVKELGGLDILVNNAGEQHPKESIKDITSEQLHRTFKTNFYSQFYLTKKAIDYLKPGSAIINTTSINPYVGN 185
BLAST of CX288972 vs. ExPASy Swiss-Prot
Match: YHXC_BACSU (Uncharacterized oxidoreductase yhxC OS=Bacillus subtilis GN=yhxC PE=3 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 4.433e-38 Identity = 87/192 (45.31%), Postives = 117/192 (60.94%), Query Frame = 2 Query: 8 VTNMASNNQPPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRKAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAEQYECGSVEDIDESRLERVFRTNIFSYFFMARHALKHMKAGSSIINTTSVNAYKGN 583 + N PPQ Q+ QPG E++M+P P F P + KL G A++TGGDSGIGRAV FA+EGA V Y+ E +DA+ET + + K + + I+ D+G + C VV + + IDILVNNAAEQ+ S+E I +L R F+TNIFS F++ + L H+K GSSIINT S+ AYKGN Sbjct: 1 MANQKKKTLPPQHQNQQPGFEYLMDPRPVFDKPK--KAKKLEGKTAIITGGDSGIGRAVSVLFAKEGANVVIVYLN--EHQDAEETKQYVEK----EGVKCLLIAGDVGDEAFCNDVVGQASQVFPSIDILVNNAAEQHVQPSIEKITSHQLIRTFQTNIFSMFYLTKAVLPHLKKGSSIINTASITAYKGN 184
BLAST of CX288972 vs. ExPASy Swiss-Prot
Match: YAY8_SCHPO (Uncharacterized oxidoreductase C4H3.08 OS=Schizosaccharomyces pombe GN=SPAC4H3.08 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.598e-27 Identity = 68/186 (36.56%), Postives = 107/186 (57.53%), Query Frame = 2 Query: 35 PPQKQDTQPGKEHVMNPIPQFT----SPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRKAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAEQYECGSVEDIDESRLERVFRTNIFSYFFMARHALKHMKAGSSIINTTSVNAYKG 580 P + PGK ++P P + S KL L+TGGDSGIG+A FA+EG+ + + + P+E DA+ T +++ + + ++ L +NC+ +VD + G ID+LVNN A Q S+EDID+ + + F+TNIFS+F++ + A+ HMK+GSSI+N +S+NAY G Sbjct: 5 PSTQTQKWPGKHADLDPEPSLLRYCDGRVHVGSGKLAEKKTLLTGGDSGIGKAAAVMFAREGSDLVISCL-PEERDDAEVTRDLIER----EGRNCWIWEGKLDKSDNCRDLVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFWVTKAAISHMKSGSSIVNCSSINAYVG 185
BLAST of CX288972 vs. ExPASy Swiss-Prot
Match: YHXD_BACSU (Uncharacterized oxidoreductase yhxD OS=Bacillus subtilis GN=yhxD PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 2.282e-26 Identity = 64/179 (35.75%), Postives = 100/179 (55.87%), Query Frame = 2 Query: 38 PQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRKAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAEQYECGSVEDIDESRLERVFRTNIFSYFFMARHALKHMKAGSSIINTTSVNAY 574 P++ PG + M P+P Y S KL G ALVTGGDSGIGRA +A+EGA VA Y+ P+E DA+E E++ + + + I DL + C+ +V + + G +D+L A +Q ++ED+ ++ + F N+FS +++ + AL ++ G+SII TTSV Y Sbjct: 19 PEQYQEPPGLQKNMKPVPDCGEKSYKGSGKLTGRKALVTGGDSGIGRAAAIAYAREGADVAINYL-PEEQPDAEEVKELIE----AEGRKAVLIPGDLSDESFCQDLVKQSHHELGGLDVLALVAGKQQAVENIEDLPTEQIYKTFEVNVFSLYWVVKAALPYLPEGASIITTTSVEGY 192
BLAST of CX288972 vs. ExPASy Swiss-Prot
Match: YGHA_ECOLI (Uncharacterized oxidoreductase yghA OS=Escherichia coli (strain K12) GN=yghA PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.789e-24 Identity = 62/189 (32.80%), Postives = 105/189 (55.56%), Query Frame = 2 Query: 11 TNMASNNQPPQKQDTQPGKEHVMNPIPQFTSPDYTPSNKLRGMVALVTGGDSGIGRAVCHCFAQEGATVAFTYVKPQEDKDAKETLEMLRKAKTPDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAEQYECGSVEDIDESRLERVFRTNIFSYFFMARHALKHMKAGSSIINTTSVNAYK 577 T + P QKQ T PG + M P+P Y S +L+ ALVTGGDSGIGRA +A+EGA VA +Y+ P E++DA++ +++ + + + + DL ++ + +V E A G +DI+ A +Q + D+ + ++ F N+F+ F++ + A+ + G+SII T+S+ AY+ Sbjct: 9 TQYYTGEYPKQKQPT-PGIQAKMTPVPDCGEKTYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYL-PVEEEDAQDVKKIIEEC----GRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQ 191 The following BLAST results are available for this feature:
BLAST of CX288972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288972 ID=CX288972; Name=CX288972; organism=Citrus clementina; type=EST; length=589bpback to top |