CX288999

Overview
NameCX288999
Unique NameCX288999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length612
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_STAAE (Uracil phosphoribosyltransferase OS=Staphylococcus aureus (strain Newman) GN=upp PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.320e-13
Identity = 54/175 (30.86%), Postives = 88/175 (50.29%), Query Frame = 1 
Query:   91 IRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612
            IRD      +F    D +  L+       L   +  + TP   M       KKL  V I+R+G  M + + +           ++RD +  K + Y  KLP DI+ER ++++DP+LATG SA +AI  L ++G    +I F+ LI+APEG+  + +  P + I  + +D  LN++
Sbjct:   19 IRDVNTGTKEFRELVDEVGMLMAYEVTRDLELQDVDIETPVTKMTAKRLAGKKLAIVPILRAGLGMTDGILSLVPAARVGHIGLYRDPETLKAVEYFAKLPQDITERQIIVVDPMLATGASAIEAITSLKKRGA--KNIRFMCLIAAPEGVEKMHEAHPDVDIYIAALDEKLNDK 191
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_STAAC (Uracil phosphoribosyltransferase OS=Staphylococcus aureus (strain COL) GN=upp PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.320e-13
Identity = 54/175 (30.86%), Postives = 88/175 (50.29%), Query Frame = 1 
Query:   91 IRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612
            IRD      +F    D +  L+       L   +  + TP   M       KKL  V I+R+G  M + + +           ++RD +  K + Y  KLP DI+ER ++++DP+LATG SA +AI  L ++G    +I F+ LI+APEG+  + +  P + I  + +D  LN++
Sbjct:   19 IRDVNTGTKEFRELVDEVGMLMAYEVTRDLELQDVDIETPVTKMTAKRLAGKKLAIVPILRAGLGMTDGILSLVPAARVGHIGLYRDPETLKAVEYFAKLPQDITERQIIVVDPMLATGASAIEAITSLKKRGA--KNIRFMCLIAAPEGVEKMHEAHPDVDIYIAALDEKLNDK 191
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_STAAB (Uracil phosphoribosyltransferase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=upp PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.320e-13
Identity = 54/175 (30.86%), Postives = 88/175 (50.29%), Query Frame = 1 
Query:   91 IRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612
            IRD      +F    D +  L+       L   +  + TP   M       KKL  V I+R+G  M + + +           ++RD +  K + Y  KLP DI+ER ++++DP+LATG SA +AI  L ++G    +I F+ LI+APEG+  + +  P + I  + +D  LN++
Sbjct:   19 IRDVNTGTKEFRELVDEVGMLMAYEVTRDLELQDVDIETPVTKMTAKRLAGKKLAIVPILRAGLGMTDGILSLVPAARVGHIGLYRDPETLKAVEYFAKLPQDITERQIIVVDPMLATGASAIEAITSLKKRGA--KNIRFMCLIAAPEGVEKMHEAHPDVDIYIAALDEKLNDK 191
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_STAA9 (Uracil phosphoribosyltransferase OS=Staphylococcus aureus (strain JH9) GN=upp PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.320e-13
Identity = 54/175 (30.86%), Postives = 88/175 (50.29%), Query Frame = 1 
Query:   91 IRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612
            IRD      +F    D +  L+       L   +  + TP   M       KKL  V I+R+G  M + + +           ++RD +  K + Y  KLP DI+ER ++++DP+LATG SA +AI  L ++G    +I F+ LI+APEG+  + +  P + I  + +D  LN++
Sbjct:   19 IRDVNTGTKEFRELVDEVGMLMAYEVTRDLELQDVDIETPVTKMTAKRLAGKKLAIVPILRAGLGMTDGILSLVPAARVGHIGLYRDPETLKAVEYFAKLPQDITERQIIVVDPMLATGASAIEAITSLKKRGA--KNIRFMCLIAAPEGVEKMHEAHPDVDIYIAALDEKLNDK 191
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_STAA8 (Uracil phosphoribosyltransferase OS=Staphylococcus aureus (strain NCTC 8325) GN=upp PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.320e-13
Identity = 54/175 (30.86%), Postives = 88/175 (50.29%), Query Frame = 1 
Query:   91 IRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612
            IRD      +F    D +  L+       L   +  + TP   M       KKL  V I+R+G  M + + +           ++RD +  K + Y  KLP DI+ER ++++DP+LATG SA +AI  L ++G    +I F+ LI+APEG+  + +  P + I  + +D  LN++
Sbjct:   19 IRDVNTGTKEFRELVDEVGMLMAYEVTRDLELQDVDIETPVTKMTAKRLAGKKLAIVPILRAGLGMTDGILSLVPAARVGHIGLYRDPETLKAVEYFAKLPQDITERQIIVVDPMLATGASAIEAITSLKKRGA--KNIRFMCLIAAPEGVEKMHEAHPDVDIYIAALDEKLNDK 191
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_STAA3 (Uracil phosphoribosyltransferase OS=Staphylococcus aureus (strain USA300) GN=upp PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.320e-13
Identity = 54/175 (30.86%), Postives = 88/175 (50.29%), Query Frame = 1 
Query:   91 IRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612
            IRD      +F    D +  L+       L   +  + TP   M       KKL  V I+R+G  M + + +           ++RD +  K + Y  KLP DI+ER ++++DP+LATG SA +AI  L ++G    +I F+ LI+APEG+  + +  P + I  + +D  LN++
Sbjct:   19 IRDVNTGTKEFRELVDEVGMLMAYEVTRDLELQDVDIETPVTKMTAKRLAGKKLAIVPILRAGLGMTDGILSLVPAARVGHIGLYRDPETLKAVEYFAKLPQDITERQIIVVDPMLATGASAIEAITSLKKRGA--KNIRFMCLIAAPEGVEKMHEAHPDVDIYIAALDEKLNDK 191
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_STAA2 (Uracil phosphoribosyltransferase OS=Staphylococcus aureus (strain JH1) GN=upp PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.320e-13
Identity = 54/175 (30.86%), Postives = 88/175 (50.29%), Query Frame = 1 
Query:   91 IRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612
            IRD      +F    D +  L+       L   +  + TP   M       KKL  V I+R+G  M + + +           ++RD +  K + Y  KLP DI+ER ++++DP+LATG SA +AI  L ++G    +I F+ LI+APEG+  + +  P + I  + +D  LN++
Sbjct:   19 IRDVNTGTKEFRELVDEVGMLMAYEVTRDLELQDVDIETPVTKMTAKRLAGKKLAIVPILRAGLGMTDGILSLVPAARVGHIGLYRDPETLKAVEYFAKLPQDITERQIIVVDPMLATGASAIEAITSLKKRGA--KNIRFMCLIAAPEGVEKMHEAHPDVDIYIAALDEKLNDK 191
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_STAA1 (Uracil phosphoribosyltransferase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=upp PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.320e-13
Identity = 54/175 (30.86%), Postives = 88/175 (50.29%), Query Frame = 1 
Query:   91 IRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612
            IRD      +F    D +  L+       L   +  + TP   M       KKL  V I+R+G  M + + +           ++RD +  K + Y  KLP DI+ER ++++DP+LATG SA +AI  L ++G    +I F+ LI+APEG+  + +  P + I  + +D  LN++
Sbjct:   19 IRDVNTGTKEFRELVDEVGMLMAYEVTRDLELQDVDIETPVTKMTAKRLAGKKLAIVPILRAGLGMTDGILSLVPAARVGHIGLYRDPETLKAVEYFAKLPQDITERQIIVVDPMLATGASAIEAITSLKKRGA--KNIRFMCLIAAPEGVEKMHEAHPDVDIYIAALDEKLNDK 191
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_RHILW (Uracil phosphoribosyltransferase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=upp PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.320e-13
Identity = 49/146 (33.56%), Postives = 79/146 (54.11%), Query Frame = 1 
Query:  178 LPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612
            L  T + + TP  +M + +   KKL   SI+R+G  +   +             ++RD +  + +  Y K P D++ER ++++DP+LATGNS+  AI  L E+G    +I FL L++APEGI       P + + T+ ID  LNE+
Sbjct:   48 LELTMETIETPLQTMESPILEGKKLVFASILRAGNGLLEGMLDLVPSARVSHIGVYRDHETLQPVEYYFKAPEDVAERLIIVVDPMLATGNSSIAAIDKLKERGA--HNIRFLCLLAAPEGIQNFRAAHPDVPVFTASIDSHLNEK 191
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_RHIL3 (Uracil phosphoribosyltransferase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=upp PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.320e-13
Identity = 49/146 (33.56%), Postives = 79/146 (54.11%), Query Frame = 1 
Query:  178 LPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612
            L  T + + TP  +M + +   KKL   SI+R+G  +   +             ++RD +  + +  Y K P D++ER ++++DP+LATGNS+  AI  L E+G    +I FL L++APEGI       P + + T+ ID  LNE+
Sbjct:   48 LELTMETIETPLQTMESPILEGKKLVFASILRAGNGLLEGMLDLVPSARVSHIGVYRDHETLQPVEYYFKAPEDVAERLIIVVDPMLATGNSSIAAIDKLKERGA--HNIRFLCLLAAPEGIRNFRAAHPDVPVFTASIDSHLNEK 191
The following BLAST results are available for this feature:
BLAST of CX288999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
UPP_STAAE5.320e-1330.86Uracil phosphoribosyltransferase OS=Staphylococcus... [more]
UPP_STAAC5.320e-1330.86Uracil phosphoribosyltransferase OS=Staphylococcus... [more]
UPP_STAAB5.320e-1330.86Uracil phosphoribosyltransferase OS=Staphylococcus... [more]
UPP_STAA95.320e-1330.86Uracil phosphoribosyltransferase OS=Staphylococcus... [more]
UPP_STAA85.320e-1330.86Uracil phosphoribosyltransferase OS=Staphylococcus... [more]
UPP_STAA35.320e-1330.86Uracil phosphoribosyltransferase OS=Staphylococcus... [more]
UPP_STAA25.320e-1330.86Uracil phosphoribosyltransferase OS=Staphylococcus... [more]
UPP_STAA15.320e-1330.86Uracil phosphoribosyltransferase OS=Staphylococcus... [more]
UPP_RHILW5.320e-1333.56Uracil phosphoribosyltransferase OS=Rhizobium legu... [more]
UPP_RHIL35.320e-1333.56Uracil phosphoribosyltransferase OS=Rhizobium legu... [more]

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Properties
Property NameValue
Genbank descriptionC02007H02SK IF1 Citrus clementina cDNA clone C02007H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288999 ID=CX288999; Name=CX288999; organism=Citrus clementina; type=EST; length=612bp
ACAAAGCTTGGTCAGCATGACCTCTGCAAAATATATCCCAATGTGTATGT
GATTCAGTCAACATTCCAGATAAGAGGTATGCATACACTGATTCGAGACC
GGGGAATATCGAAGCATGATTTTGTGTTTTATTCAGATCGACTAATTCGG
CTGGTTGTGGAACATGGCCTTGGCCATTTGCCATTCACTGAGAAGCAAGT
AGTGACCCCAACAGGGTCGATGTATACTGGGGTCGATTTTTGCAAGAAAC
TATGTGGGGTCTCCATTGTTCGAAGTGGTGAAAGCATGGAAAATGCATTG
CGTGCATGTTGCAAAGGAATAAAAATTGGAAAAATTCTGATTCACCGTGA
TGGGGACAATGGCAAACAGCTTATCTATGAGAAGCTGCCAAATGATATTT
CAGAAAGACATGTGCTGCTTCTAGATCCTGTTCTTGCCACAGGGAACTCT
GCCAACCAAGCTATTCAACTACTCGTAGAGAAAGGAGTTCCAGAATCCCA
CATTATATTCTTGAATCTCATCTCTGCTCCAGAGGGAATCCATTGTGTTT
GCAAACGTTTTCCATCACTGAAAATTGTCACTTCAGAGATTGATGTTGCT
TTGAATGAAGAA
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