CX288999

Overview
NameCX288999
Unique NameCX288999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length612
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10785 contig Ccv1_Contig10785:907..1518. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_ARATH (Uracil phosphoribosyltransferase OS=Arabidopsis thaliana GN=UPT1 PE=1 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 6.820e-77
Identity = 137/178 (76.97%), Postives = 155/178 (87.08%), Query Frame = 1
Query:   79 MHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612
            MHTLIRD   +KHDFVFYSDRLIRLVVEHGLGHLPFTEKQV+TPTG +Y+GVDFCK+LCGVS++RSGESMENALRA          LIHR+GDNG+QL+YEKLPNDISERHVLLLDP+L TGNSA +AI LL+ KGVPE +IIFLNLISAP+G+H VCK+FP +KIVTSEID  LNEE
Sbjct:    1 MHTLIRDSQTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGCVYSGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLVYEKLPNDISERHVLLLDPILGTGNSAVEAINLLISKGVPEGNIIFLNLISAPQGVHVVCKKFPRIKIVTSEIDNGLNEE 178          
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_DICDI (Uracil phosphoribosyltransferase OS=Dictyostelium discoideum GN=uprt PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 6.428e-51
Identity = 100/195 (51.28%), Postives = 138/195 (70.77%), Query Frame = 1
Query:   34 YP-NVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612
            YP NV V++S  Q++G+ T+IR+R   + DF+FYSDR+IRL++E GL  LPF E  + TPTG  Y GV F  K+CGVSIVR+GESME  LRA          LI RD +    +L+Y KLP+DI+ R VLLLDP+LATG +  QA+++L+E+GV E +I+F+NL+++PEGI     ++P +K+VT EID  LNE+
Sbjct:    3 YPENVVVLKSNHQLKGLFTIIRNRETKREDFIFYSDRIIRLLIEEGLYCLPFHETTITTPTGCEYQGVTFASKICGVSIVRAGESMEAGLRAVCKHIKIGKILIQRDEETALPKLLYAKLPHDIANRQVLLLDPMLATGGTVTQAVEVLLERGVKEENIVFINLVASPEGIKVFTDKYPRVKVVTGEIDSHLNEK 197          
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_TOXGO (Uracil phosphoribosyltransferase OS=Toxoplasma gondii GN=uprt PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.135e-47
Identity = 96/197 (48.73%), Postives = 134/197 (68.02%), Query Frame = 1
Query:   19 DLCKIYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALN 606
            D+   +PNV +++ T Q+R M T+IRD+   K +FVFY+DRLIRL++E  L  LPF +K+V TP    Y GV F  K+CGVSIVR+GESME+ LRA          LI RD    + +LIYEKLP DI +R V+LLDP+ AT  S  +AI++L+  GV E  IIF+N+++AP+GI  V K +P +++VT+ +D+ LN
Sbjct:   28 DIITRFPNVVLMKQTAQLRAMMTIIRDKETPKEEFVFYADRLIRLLIEEALNELPFEKKEVTTPLDVSYHGVSFYSKICGVSIVRAGESMESGLRAVCRGCRIGKILIQRDETTAEPKLIYEKLPADIRDRWVMLLDPMCATAGSVCKAIEVLLRLGVKEERIIFVNILAAPQGIERVFKEYPKVRMVTAAVDICLN 224          
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_SACKL (Uracil phosphoribosyltransferase OS=Saccharomyces kluyveri GN=FUR1 PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.811e-45
Identity = 95/192 (49.48%), Postives = 126/192 (65.62%), Query Frame = 1
Query:   34 YPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALN 606
            + NVY++  T Q+ G++T+IRD+   + DFVFYSDR+IRL+VE GL HLP T   V T T   + GV F  K+CGVSIVR+GESME  LR           LI RD +    +L YEKLP+DI++R V LLDP+LATG SA  A ++L+++GV    I FLNLI + EGI     +FP++KIVT  +D  L+
Sbjct:    6 FKNVYLLPQTNQLLGLYTIIRDKKTKRPDFVFYSDRIIRLLVEEGLNHLPVTPNTVETDTNQSFDGVSFLGKICGVSIVRAGESMEQGLRDCCRSVRIGKILIQRDEETALPKLFYEKLPDDIADRFVFLLDPMLATGGSAIMATEVLIKRGVKPERIFFLNLICSKEGIENYHAKFPTIKIVTGALDKGLD 197          
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_YEAST (Uracil phosphoribosyltransferase OS=Saccharomyces cerevisiae GN=FUR1 PE=1 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 8.990e-45
Identity = 94/193 (48.70%), Postives = 127/193 (65.80%), Query Frame = 1
Query:   34 YPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            + NVY++  T Q+ G++T+IR++  ++ DF+FYSDR+IRL+VE GL HLP  ++ V T T   + GV F  K+CGVSIVR+GESME  LR           LI RD +    +L YEKLP DISER+V LLDP+LATG SA  A ++L+++GV    I FLNLI + EGI      FP ++IVT  +D  L+E
Sbjct:    6 FKNVYLLPQTNQLLGLYTIIRNKNTTRPDFIFYSDRIIRLLVEEGLNHLPVQKQIVETDTNENFEGVSFMGKICGVSIVRAGESMEQGLRDCCRSVRIGKILIQRDEETALPKLFYEKLPEDISERYVFLLDPMLATGGSAIMATEVLIKRGVKPERIYFLNLICSKEGIEKYHAAFPEVRIVTGALDRGLDE 198          
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP1_SCHPO (Probable uracil phosphoribosyltransferase 1 OS=Schizosaccharomyces pombe GN=SPAC1B3.01c PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.462e-44
Identity = 91/190 (47.89%), Postives = 131/190 (68.95%), Query Frame = 1
Query:   40 NVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLI-YEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALN 606
            NVYV+  T Q++G+ T+IRD+   + +F+FY++R+IRL+VE GL HLP +  +V T   + Y GV F  ++CGVSI+R+GESME  LR           LI RD +  K ++ Y KLP DIS+R+VLLLDP+LATG SA  A+++L+  G  +  IIFLN+I++PEG+  V  RFP+++IVT+ ID  L+
Sbjct:    9 NVYVLNQTNQLKGLFTIIRDKTKPRSEFIFYANRIIRLIVEEGLNHLPVSSAKVTTAQNAEYEGVMFDGRICGVSIMRAGESMEQGLRECCRSVRIGKILIQRDEETHKPVLHYIKLPEDISKRYVLLLDPMLATGGSAICAMEILINMGCKQEQIIFLNVIASPEGLKNVHDRFPNIRIVTAVIDEGLD 198          
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_DANRE (Uracil phosphoribosyltransferase OS=Danio rerio GN=uprt PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.485e-39
Identity = 87/189 (46.03%), Postives = 119/189 (62.96%), Query Frame = 1
Query:   28 KIYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEI 591
            +I P + ++    QIR + T+IRD+  S+ DFVF +DRLIRLVVE GL  LP++E  V TPTG  Y GV F K  CGVSI+RSGE+ME  LR           LI  D +  K ++ Y K P DIS R VLL+ P+L+TGN+  +A+++L E G+   HII L+L S P G   + + FP + I+T+E+
Sbjct:   53 QIGPQLKLLPLNDQIRELQTIIRDKTTSRGDFVFCADRLIRLVVEEGLNQLPYSECTVTTPTGHKYEGVKFEKGNCGVSIMRSGEAMEQGLRDCCRSIRIGKILIQSDEETQKAKVYYAKFPPDISRRKVLLMYPILSTGNTVIEAVRVLTEHGLQAKHIILLSLFSTPHGARSIVQEFPDITILTTEV 241          
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UCKA_DICDI (Uridine-cytidine kinase A OS=Dictyostelium discoideum GN=udkA PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 9.627e-39
Identity = 86/205 (41.95%), Postives = 132/205 (64.39%), Query Frame = 1
Query:    4 KLGQHDL--CKIYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612
            K  Q DL   ++  +++VI+ T QI+ M +++R++     DFVFYSDRL  L++E  L +LPFTEK V TPTGS+Y G +   ++C + ++R+G  ME  LR+          LI  D      L YEKLPN +++ HVL+LDP +ATG S+  AI++L++ GVPE+ IIF+++I++ +GI  +  RFP ++ V S ID  L++E
Sbjct:  278 KTAQLDLEGLELPSSIHVIKETNQIKAMLSILRNKDTKVGDFVFYSDRLCSLIIEEALTYLPFTEKIVTTPTGSLYHGEELNSRICALVVLRAGGCMEQPLRSICKGIRTGKVLIQSDEMKKPHLFYEKLPN-VTDSHVLVLDPTIATGASSEMAIRVLLDHGVPENKIIFVSVIASLKGILYLNYRFPDVQFVVSAIDKELSDE 481          
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UCKL1_MOUSE (Uridine-cytidine kinase-like 1 OS=Mus musculus GN=Uckl1 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 8.150e-38
Identity = 82/189 (43.39%), Postives = 125/189 (66.14%), Query Frame = 1
Query:   49 VIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            V++ST Q+RGMHT+IRD+  S+ +F+FYS RL+RL++EH L  LPF +  V TP G  Y G  +  K++ GVSI+R+GE+ME ALRA          LI  +   G+ +L Y +LP DIS+ HV+L+D  ++TG +A  A+++L++  VPE  I  L+L+ A  G+H V   FP ++I+T+ +D  +N+
Sbjct:  326 VLKSTPQVRGMHTIIRDKETSRDEFIFYSKRLMRLLIEHALSFLPFQDCTVQTPQGQDYVGKCYAGKQITGVSILRAGETMEPALRAVCKDVRIGTILIQTNQLTGEPELHYLRLPKDISDDHVILMDCTVSTGAAAMMAVRVLLDHDVPEDKIFLLSLLMAEMGVHSVAYAFPRVRIITTAVDKRVND 514          
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UCKL1_HUMAN (Uridine-cytidine kinase-like 1 OS=Homo sapiens GN=UCKL1 PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.064e-37
Identity = 82/189 (43.39%), Postives = 125/189 (66.14%), Query Frame = 1
Query:   49 VIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            V++ST Q+RGMHT+IRD+  S+ +F+FYS RL+RL++EH L  LPF +  V TP G  Y G  +  K++ GVSI+R+GE+ME ALRA          LI  +   G+ +L Y +LP DIS+ HV+L+D  ++TG +A  A+++L++  VPE  I  L+L+ A  G+H V   FP ++I+T+ +D  +N+
Sbjct:  326 VLKSTPQVRGMHTIIRDKETSRDEFIFYSKRLMRLLIEHALSFLPFQDCVVQTPQGQDYAGKCYAGKQITGVSILRAGETMEPALRAVCKDVRIGTILIQTNQLTGEPELHYLRLPKDISDDHVILMDCTVSTGAAAMMAVRVLLDHDVPEDKIFLLSLLMAEMGVHSVAYAFPRVRIITTAVDKRVND 514          
The following BLAST results are available for this feature:
BLAST of CX288999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
UPP_ARATH6.820e-7776.97Uracil phosphoribosyltransferase OS=Arabidopsis th... [more]
UPP_DICDI6.428e-5151.28Uracil phosphoribosyltransferase OS=Dictyostelium ... [more]
UPP_TOXGO1.135e-4748.73Uracil phosphoribosyltransferase OS=Toxoplasma gon... [more]
UPP_SACKL1.811e-4549.48Uracil phosphoribosyltransferase OS=Saccharomyces ... [more]
UPP_YEAST8.990e-4548.70Uracil phosphoribosyltransferase OS=Saccharomyces ... [more]
UPP1_SCHPO4.462e-4447.89Probable uracil phosphoribosyltransferase 1 OS=Sch... [more]
UPP_DANRE1.485e-3946.03Uracil phosphoribosyltransferase OS=Danio rerio GN... [more]
UCKA_DICDI9.627e-3941.95Uridine-cytidine kinase A OS=Dictyostelium discoid... [more]
UCKL1_MOUSE8.150e-3843.39Uridine-cytidine kinase-like 1 OS=Mus musculus GN=... [more]
UCKL1_HUMAN1.064e-3743.39Uridine-cytidine kinase-like 1 OS=Homo sapiens GN=... [more]

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Properties
Property NameValue
Genbank descriptionC02007H02SK IF1 Citrus clementina cDNA clone C02007H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288999 ID=CX288999; Name=CX288999; organism=Citrus clementina; type=EST; length=612bp
ACAAAGCTTGGTCAGCATGACCTCTGCAAAATATATCCCAATGTGTATGT
GATTCAGTCAACATTCCAGATAAGAGGTATGCATACACTGATTCGAGACC
GGGGAATATCGAAGCATGATTTTGTGTTTTATTCAGATCGACTAATTCGG
CTGGTTGTGGAACATGGCCTTGGCCATTTGCCATTCACTGAGAAGCAAGT
AGTGACCCCAACAGGGTCGATGTATACTGGGGTCGATTTTTGCAAGAAAC
TATGTGGGGTCTCCATTGTTCGAAGTGGTGAAAGCATGGAAAATGCATTG
CGTGCATGTTGCAAAGGAATAAAAATTGGAAAAATTCTGATTCACCGTGA
TGGGGACAATGGCAAACAGCTTATCTATGAGAAGCTGCCAAATGATATTT
CAGAAAGACATGTGCTGCTTCTAGATCCTGTTCTTGCCACAGGGAACTCT
GCCAACCAAGCTATTCAACTACTCGTAGAGAAAGGAGTTCCAGAATCCCA
CATTATATTCTTGAATCTCATCTCTGCTCCAGAGGGAATCCATTGTGTTT
GCAAACGTTTTCCATCACTGAAAATTGTCACTTCAGAGATTGATGTTGCT
TTGAATGAAGAA
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