CX288999

Overview
NameCX288999
Unique NameCX288999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length612
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_STRPD (Uracil phosphoribosyltransferase OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=upp PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.640e-12
Identity = 52/176 (29.55%), Postives = 90/176 (51.14%), Query Frame = 1
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            +++R +  S  DF    + +  L+       LP  +  + TP           KKL  V I+R+G  M + L +           ++R+ +  + + Y  KLP DI++R + L+DP+LATG SA  A+  L ++G   ++I F+ L++APEG+  + +  P + I T+ +D  LNE
Sbjct:   17 SILRRQTTSTKDFRELVNEIAMLMGYEVSRDLPLEDVDIQTPVSKTVQKQLAGKKLAIVPILRAGIGMVDGLLSLVPAAKVGHIGMYRNEETLEPVEYLVKLPEDINQRQIFLVDPMLATGGSAILAVDSLKKRGA--ANIKFVCLVAAPEGVKKLQEAHPDIDIFTAALDDHLNE 190          
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_STRPC (Uracil phosphoribosyltransferase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=upp PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.640e-12
Identity = 52/176 (29.55%), Postives = 90/176 (51.14%), Query Frame = 1
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            +++R +  S  DF    + +  L+       LP  +  + TP           KKL  V I+R+G  M + L +           ++R+ +  + + Y  KLP DI++R + L+DP+LATG SA  A+  L ++G   ++I F+ L++APEG+  + +  P + I T+ +D  LNE
Sbjct:   17 SILRRQTTSTKDFRELVNEIAMLMGYEVSRDLPLEDVDIQTPVSKTVQKQLAGKKLAIVPILRAGIGMVDGLLSLVPAAKVGHIGMYRNEETLEPVEYLVKLPEDINQRQIFLVDPMLATGGSAILAVDSLKKRGA--ANIKFVCLVAAPEGVKKLQEAHPDIDIFTAALDDHLNE 190          
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_STRP8 (Uracil phosphoribosyltransferase OS=Streptococcus pyogenes serotype M18 GN=upp PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.640e-12
Identity = 52/176 (29.55%), Postives = 90/176 (51.14%), Query Frame = 1
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            +++R +  S  DF    + +  L+       LP  +  + TP           KKL  V I+R+G  M + L +           ++R+ +  + + Y  KLP DI++R + L+DP+LATG SA  A+  L ++G   ++I F+ L++APEG+  + +  P + I T+ +D  LNE
Sbjct:   17 SILRRQTTSTKDFRELVNEIAMLMGYEVSRDLPLEDVDIQTPVSKTVQKQLAGKKLAIVPILRAGIGMVDGLLSLVPAAKVGHIGMYRNEETLEPVEYLVKLPEDINQRQIFLVDPMLATGGSAILAVDSLKKRGA--ANIKFVCLVAAPEGVKKLQEAHPDIDIFTAALDDHLNE 190          
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_STRP6 (Uracil phosphoribosyltransferase OS=Streptococcus pyogenes serotype M6 GN=upp PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.640e-12
Identity = 52/176 (29.55%), Postives = 90/176 (51.14%), Query Frame = 1
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            +++R +  S  DF    + +  L+       LP  +  + TP           KKL  V I+R+G  M + L +           ++R+ +  + + Y  KLP DI++R + L+DP+LATG SA  A+  L ++G   ++I F+ L++APEG+  + +  P + I T+ +D  LNE
Sbjct:   17 SILRRQTTSTKDFRELVNEIAMLMGYEVSRDLPLEDVDIQTPVSKTVQKQLAGKKLAIVPILRAGIGMVDGLLSLVPAAKVGHIGMYRNEETLEPVEYLVKLPEDINQRQIFLVDPMLATGGSAILAVDSLKKRGA--ANIKFVCLVAAPEGVKKLQEAHPDIDIFTAALDDHLNE 190          
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_STRP3 (Uracil phosphoribosyltransferase OS=Streptococcus pyogenes serotype M3 GN=upp PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.640e-12
Identity = 52/176 (29.55%), Postives = 90/176 (51.14%), Query Frame = 1
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            +++R +  S  DF    + +  L+       LP  +  + TP           KKL  V I+R+G  M + L +           ++R+ +  + + Y  KLP DI++R + L+DP+LATG SA  A+  L ++G   ++I F+ L++APEG+  + +  P + I T+ +D  LNE
Sbjct:   17 SILRRQTTSTKDFRELVNEIAMLMGYEVSRDLPLEDVDIQTPVSKTVQKQLAGKKLAIVPILRAGIGMVDGLLSLVPAAKVGHIGMYRNEETLEPVEYLVKLPEDINQRQIFLVDPMLATGGSAILAVDSLKKRGA--ANIKFVCLVAAPEGVKKLQEAHPDIDIFTAALDDHLNE 190          
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_STRP1 (Uracil phosphoribosyltransferase OS=Streptococcus pyogenes serotype M1 GN=upp PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.640e-12
Identity = 52/176 (29.55%), Postives = 90/176 (51.14%), Query Frame = 1
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            +++R +  S  DF    + +  L+       LP  +  + TP           KKL  V I+R+G  M + L +           ++R+ +  + + Y  KLP DI++R + L+DP+LATG SA  A+  L ++G   ++I F+ L++APEG+  + +  P + I T+ +D  LNE
Sbjct:   17 SILRRQTTSTKDFRELVNEIAMLMGYEVSRDLPLEDVDIQTPVSKTVQKQLAGKKLAIVPILRAGIGMVDGLLSLVPAAKVGHIGMYRNEETLEPVEYLVKLPEDINQRQIFLVDPMLATGGSAILAVDSLKKRGA--ANIKFVCLVAAPEGVKKLQEAHPDIDIFTAALDDHLNE 190          
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_POLNA (Uracil phosphoribosyltransferase OS=Polaromonas naphthalenivorans (strain CJ2) GN=upp PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.640e-12
Identity = 59/195 (30.26%), Postives = 94/195 (48.21%), Query Frame = 1
Query:   40 NVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTP----TGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            NV++I     ++   TL+R +  S   F      L  L+       +P  + +V TP    TG +  G    KKL  VSI+R+G    +               ++RD +    +  Y K+P ++ ER ++++DP+LATGNSA  A+  L  K +    I F+ L++ PEG+  + K  P + I T+ ID  LNE
Sbjct:    3 NVHLISHPL-VQHKLTLMRRKNASTSTFRTLLAELSNLMAYEVTRDMPLQDIEVETPLETTTGKIIDG----KKLVLVSILRAGNGFLDGFLNVVPGARVGHIGLYRDPETLSPVEYYFKMPQEMQERDIVIVDPMLATGNSAIAAVDRL--KQLKPRSIKFVCLLTCPEGVAALQKAHPDVDIYTAAIDRQLNE 190          
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_STRTD (Uracil phosphoribosyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=upp PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.448e-12
Identity = 52/176 (29.55%), Postives = 87/176 (49.43%), Query Frame = 1
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            +++R    S  DF    + +  L+       LP  E ++ TP           KKL  V I+R+G  M +   +           ++RD +  + + Y  KLP DI +R + ++DP+LATG SA  A+  L ++G   ++I F+ L++APEG+  +    P + I T+ +D  LNE
Sbjct:   17 SILRREDTSTKDFRELVNEIAMLMGYEVSRDLPLEEVEIQTPIIKTVQKQLSGKKLAIVPILRAGIGMVDGFLSLVPAAKVGHIGMYRDEETLEPVEYLVKLPEDIDQRQIFVMDPMLATGGSAILAVDSLKKRGA--ANIKFVCLVAAPEGVKKLQDAHPDIDIYTASLDERLNE 190          
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_STRT2 (Uracil phosphoribosyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=upp PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.448e-12
Identity = 52/176 (29.55%), Postives = 87/176 (49.43%), Query Frame = 1
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            +++R    S  DF    + +  L+       LP  E ++ TP           KKL  V I+R+G  M +   +           ++RD +  + + Y  KLP DI +R + ++DP+LATG SA  A+  L ++G   ++I F+ L++APEG+  +    P + I T+ +D  LNE
Sbjct:   17 SILRREDTSTKDFRELVNEIAMLMGYEVSRDLPLEEVEIQTPIIKTVQKQLSGKKLAIVPILRAGIGMVDGFLSLVPAAKVGHIGMYRDEETLEPVEYLVKLPEDIDQRQIFVMDPMLATGGSAILAVDSLKKRGA--ANIKFVCLVAAPEGVKKLQDAHPDIDIYTASLDERLNE 190          
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_STRT1 (Uracil phosphoribosyltransferase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=upp PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.448e-12
Identity = 52/176 (29.55%), Postives = 87/176 (49.43%), Query Frame = 1
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            +++R    S  DF    + +  L+       LP  E ++ TP           KKL  V I+R+G  M +   +           ++RD +  + + Y  KLP DI +R + ++DP+LATG SA  A+  L ++G   ++I F+ L++APEG+  +    P + I T+ +D  LNE
Sbjct:   17 SILRREDTSTKDFRELVNEIAMLMGYEVSRDLPLEEVEIQTPIIKTVQKQLSGKKLAIVPILRAGIGMVDGFLSLVPAAKVGHIGMYRDEETLEPVEYLVKLPEDIDQRQIFVMDPMLATGGSAILAVDSLKKRGA--ANIKFVCLVAAPEGVKKLQDAHPDIDIYTASLDERLNE 190          
The following BLAST results are available for this feature:
BLAST of CX288999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
UPP_STRPD2.640e-1229.55Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_STRPC2.640e-1229.55Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_STRP82.640e-1229.55Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_STRP62.640e-1229.55Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_STRP32.640e-1229.55Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_STRP12.640e-1229.55Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_POLNA2.640e-1230.26Uracil phosphoribosyltransferase OS=Polaromonas na... [more]
UPP_STRTD3.448e-1229.55Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_STRT23.448e-1229.55Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_STRT13.448e-1229.55Uracil phosphoribosyltransferase OS=Streptococcus ... [more]

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Properties
Property NameValue
Genbank descriptionC02007H02SK IF1 Citrus clementina cDNA clone C02007H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288999 ID=CX288999; Name=CX288999; organism=Citrus clementina; type=EST; length=612bp
ACAAAGCTTGGTCAGCATGACCTCTGCAAAATATATCCCAATGTGTATGT
GATTCAGTCAACATTCCAGATAAGAGGTATGCATACACTGATTCGAGACC
GGGGAATATCGAAGCATGATTTTGTGTTTTATTCAGATCGACTAATTCGG
CTGGTTGTGGAACATGGCCTTGGCCATTTGCCATTCACTGAGAAGCAAGT
AGTGACCCCAACAGGGTCGATGTATACTGGGGTCGATTTTTGCAAGAAAC
TATGTGGGGTCTCCATTGTTCGAAGTGGTGAAAGCATGGAAAATGCATTG
CGTGCATGTTGCAAAGGAATAAAAATTGGAAAAATTCTGATTCACCGTGA
TGGGGACAATGGCAAACAGCTTATCTATGAGAAGCTGCCAAATGATATTT
CAGAAAGACATGTGCTGCTTCTAGATCCTGTTCTTGCCACAGGGAACTCT
GCCAACCAAGCTATTCAACTACTCGTAGAGAAAGGAGTTCCAGAATCCCA
CATTATATTCTTGAATCTCATCTCTGCTCCAGAGGGAATCCATTGTGTTT
GCAAACGTTTTCCATCACTGAAAATTGTCACTTCAGAGATTGATGTTGCT
TTGAATGAAGAA
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