CX288999
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_LACF3 (Uracil phosphoribosyltransferase OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=upp PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.072e-17 Identity = 56/177 (31.64%), Postives = 92/177 (51.98%), Query Frame = 1 Query: 85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612 T+IRD+ + F + L+ ++P + +V TP KK+ + I+R+G M + + ++RD + K Y KLPNDI+ER + ++DP+LATG SA AI+ L ++G E ++ F L++APEG+ V + FP + I T+ +D LNE+ Sbjct: 17 TMIRDKRVGTKVFRETVKEISTLMAYEVSRNMPLKDVEVETPIAKTTQKELAGKKVAIIPILRAGLGMVDGMTELIPAAKIGFIGMYRDEETLKPHEYFVKLPNDITERQLFIVDPMLATGGSAVMAIEALKKRGCQEKNMKFACLVAAPEGVKAVQEAFPDVDIYTAGLDERLNED 193
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_PEDPA (Uracil phosphoribosyltransferase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=upp PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.036e-16 Identity = 57/177 (32.20%), Postives = 92/177 (51.98%), Query Frame = 1 Query: 85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612 TLIRD+ S +F + + L+ +P + ++ TP G KK+ V I+R+G M + + ++RD + K Y KLP+DISER V ++DP+LATG SA A+ L ++G + I F +L++APEG+ + + P + I T+ +D LNE+ Sbjct: 17 TLIRDKHCSTKEFREIVNEISTLMAYEVSRDMPLMDVEIETPIGKSIQKQISGKKVAIVPILRAGLGMVDGMAELLPVARIGHIGMYRDEETLKPTEYFVKLPSDISERQVFVVDPMLATGGSAIMAVDALKKRGAKD--IRFCSLVAAPEGVKALQEAHPDIDIYTAALDEKLNED 191
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_OCEIH (Uracil phosphoribosyltransferase OS=Oceanobacillus iheyensis GN=upp PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.036e-16 Identity = 63/191 (32.98%), Postives = 97/191 (50.79%), Query Frame = 1 Query: 40 NVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609 NV+V I+ T IRD+ +F D + L+ LP E V TP + + V KKL V I+R+G M + +R ++RD + K + Y KLPNDI ER ++++DP+LATG SAN AI + ++G +I + LI+APEG+ V + P + I + +D L++ Sbjct: 3 NVFVFDHPL-IQHKLTYIRDKNTGTKEFRELVDEVAMLMAFEITRDLPVKEVNVDTPVTTAPSKVLAGKKLGLVPILRAGLGMVDGVRKLIPAAKVGHVGLYRDPETFKPVEYYVKLPNDIEEREIIVIDPMLATGGSANDAIAAIKKRGA--KNIRLMCLIAAPEGVEVVKEAHPDVDIYLAAMDERLDD 190
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_LACRJ (Uracil phosphoribosyltransferase OS=Lactobacillus reuteri (strain JCM 1112) GN=upp PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.936e-16 Identity = 54/177 (30.51%), Postives = 90/177 (50.85%), Query Frame = 1 Query: 85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612 T+IRD+ + F + L+ +P + ++ TP KK+ + I+R+G M + + ++RD + K Y KLPNDI+ER + ++DP+LATG SA AI+ L ++G E ++ F L++APEG+ V +P + I T+ +D LNE+ Sbjct: 17 TMIRDKNVGTKFFRETVKEISTLMAYEVARDMPLKDVEIETPIAKTTQKELAGKKVAIIPILRAGIGMVDGMTDLIPAAKIGFIGMYRDEETLKPHEYFVKLPNDITERQLFIVDPMLATGGSAMMAIEALKKRGCSEKNMKFACLVAAPEGVKAVRDAYPDVDIYTAGLDDHLNED 193
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_LACRD (Uracil phosphoribosyltransferase OS=Lactobacillus reuteri (strain DSM 20016) GN=upp PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.936e-16 Identity = 54/177 (30.51%), Postives = 90/177 (50.85%), Query Frame = 1 Query: 85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612 T+IRD+ + F + L+ +P + ++ TP KK+ + I+R+G M + + ++RD + K Y KLPNDI+ER + ++DP+LATG SA AI+ L ++G E ++ F L++APEG+ V +P + I T+ +D LNE+ Sbjct: 17 TMIRDKNVGTKFFRETVKEISTLMAYEVARDMPLKDVEIETPIAKTTQKELAGKKVAIIPILRAGIGMVDGMTDLIPAAKIGFIGMYRDEETLKPHEYFVKLPNDITERQLFIVDPMLATGGSAMMAIEALKKRGCSEKNMKFACLVAAPEGVKAVRDAYPDVDIYTAGLDDHLNED 193
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_DICTD (Uracil phosphoribosyltransferase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=upp PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.714e-16 Identity = 61/176 (34.66%), Postives = 89/176 (50.57%), Query Frame = 1 Query: 85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609 T +RD+ +F + L++ +LP E +V TP G V K L V I+R+G M + ++RD + K + Y KLP DI +R V+++DP+LATG SA AI +L KGV +I F+ +ISAPEGI + P + I T+ ID LN+ Sbjct: 15 TKLRDKSTEPKEFRELLSEISSLMLYEVTRNLPTKEVEVETPLGIAKGKVLNNKDLAIVPILRAGLVMAEGMLRILPSAKVGHIGLYRDPNTLKPVQYYTKLPEDIDKREVVVVDPMLATGGSAIAAISILKTKGV--KNIKFVCIISAPEGIEALKNSHPDVDIYTAAIDEKLND 188
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_DICT6 (Uracil phosphoribosyltransferase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=upp PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.768e-16 Identity = 61/176 (34.66%), Postives = 90/176 (51.14%), Query Frame = 1 Query: 85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609 T +RD+ +F + L++ +LP E +V TP G V K L V I+R+G M + + ++RD + K + Y KLP DI +R V+++DP+LATG SA AI +L KGV + I F+ +ISAPEGI + P + I T+ ID LN+ Sbjct: 15 TKLRDKNTGPKEFRELLFEISSLMLYEVTKNLPTKEVEVETPLGIAKGKVLDNKDLAIVPILRAGLVMADGMLQILPSAKVGHIGLYRDPETLKPVQYYTKLPEDIDKREVIVVDPMLATGGSAVAAISILKAKGVKD--IKFVCIISAPEGIETLRNSHPDVDIYTAAIDERLND 188
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_GEOSW (Uracil phosphoribosyltransferase OS=Geobacillus sp. (strain WCH70) GN=upp PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.145e-15 Identity = 56/176 (31.82%), Postives = 88/176 (50.00%), Query Frame = 1 Query: 85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609 T IRD+ +F + + L+ LP E ++ TP + V KKL + I+R+G M + + ++RD + K + Y KLP D+ ER +++DP+LATG SA +AI L ++G I F+ LI+APEG+ V K P + I + +D LN+ Sbjct: 17 TYIRDKNTGTKEFRELVEEVATLMAFEITRDLPLEEVEIETPVSKAKSKVIAGKKLGVIPILRAGIGMVDGILKLIPAAKVGHIGLYRDPETLKPVEYYVKLPTDVEERDFIVVDPMLATGGSAVEAINALKKRGA--KSIKFMCLIAAPEGVEAVKKAHPDVDIYIAALDEKLND 190
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_CLOBM (Uracil phosphoribosyltransferase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=upp PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.145e-15 Identity = 58/176 (32.95%), Postives = 86/176 (48.86%), Query Frame = 1 Query: 88 LIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612 LIRD+ DF + + L+ L E ++ TP + KK+ V I+R+G M + + ++RD + K + Y KLP DI +R V++ DP+LATG SA AI LL +KG HI + L++APEGI V P + I + +D LNE+ Sbjct: 18 LIRDKNTGSKDFRELVEEVAMLMAYEVTRDLQLKEVEIETPICKTKCKMLSGKKVAIVPILRAGLGMVGGMTSLIPAAKVGHIGLYRDEETLKPVEYFCKLPQDIGDRDVIVTDPMLATGGSAKDAITLLKQKGA--KHIRLMCLVAAPEGIKEVMDEHPDVDIYVASVDEKLNEK 191
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_CLOBL (Uracil phosphoribosyltransferase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=upp PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.145e-15 Identity = 58/176 (32.95%), Postives = 86/176 (48.86%), Query Frame = 1 Query: 88 LIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612 LIRD+ DF + + L+ L E ++ TP + KK+ V I+R+G M + + ++RD + K + Y KLP DI +R V++ DP+LATG SA AI LL +KG HI + L++APEGI V P + I + +D LNE+ Sbjct: 18 LIRDKNTGSKDFRELVEEVAMLMAYEVTRDLQLKEVEIETPICKTKCKMLSGKKVAIVPILRAGLGMVGGMTSLIPAAKVGHIGLYRDEETLKPVEYFCKLPQDIGDRDVIVTDPMLATGGSAKDAITLLKQKGA--KHIRLMCLVAAPEGIKEVMDEHPDVDIYVASVDEKLNEK 191 The following BLAST results are available for this feature:
BLAST of CX288999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288999 ID=CX288999; Name=CX288999; organism=Citrus clementina; type=EST; length=612bpback to top |