CX288999
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BURTA (Uracil phosphoribosyltransferase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=upp PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.953e-15 Identity = 57/192 (29.69%), Postives = 95/192 (49.48%), Query Frame = 1 Query: 34 YPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609 +PN++++ I+ T +RD+ S F + L+ +LP T K+V TP + V KKL V ++R+G M + L ++R D+ +LP D+ +R +L DP++ATG SA AI +L +GVP I+FL L++APEG+ P +K+ + +D L++ Sbjct: 7 FPNLFILDHPL-IQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRNLPITTKRVETPLVEIDAPVIAGKKLAIVPVLRAGVGMSDGLLELIPSARVGHIGVYRADDHRPVEYLVRLP-DLEDRIFILCDPMVATGYSAAHAIDVLKRRGVPGERIMFLALVAAPEGVQVFQDAHPDVKLYVASLDSHLDD 196
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BACCN (Uracil phosphoribosyltransferase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=upp PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.953e-15 Identity = 55/176 (31.25%), Postives = 87/176 (49.43%), Query Frame = 1 Query: 85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609 T IRD+ +F D + L+ LP E ++ TP T V KKL + I+R+G M + + ++RD + + Y KLP D+ ER ++LDP+LATG SA +AI L ++G HI + +++APEG+ V + P + I + +D LN+ Sbjct: 17 TYIRDKNTGTKEFRELVDEVASLMAFEITRDLPLEEIEIETPVSKAKTKVIAGKKLGLIPILRAGLGMVDGILKLIPAAKVGHIGLYRDPKTLQPVEYYVKLPTDVEERDFIVLDPMLATGGSAAEAINSLKKRGA--KHIKLMCIVAAPEGVKVVQEEHPDVDIYVAALDEKLND 190
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_DEIRA (Uracil phosphoribosyltransferase OS=Deinococcus radiodurans GN=upp PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.551e-15 Identity = 59/176 (33.52%), Postives = 87/176 (49.43%), Query Frame = 1 Query: 85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDN-GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609 +L+RD +F + L L+ + L + TP + KKL V+I+R+G M +A+ ++RD + Y KLP DI+ER V L DP+LATG SAN AIQ L + G I + +++APEGIH V + P + IVT+ +D LN+ Sbjct: 18 SLMRDERTGVKEFRELAGELSLLLAYEAMRDLEVEPVRFATPIEEGDFPMLSGKKLALVAILRAGLVMTDAIVTLVPAAKVGHIGMYRDPQSLAPVAYYSKLPADIAERRVFLTDPMLATGGSANAAIQNLKDAGA--QSIKLMTILAAPEGIHAVQQAHPDVDIVTASVDSRLND 191
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BURVG (Uracil phosphoribosyltransferase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=upp PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.551e-15 Identity = 55/192 (28.65%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 34 YPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609 +PN++++ I+ T +RD+ S F + L+ +LP T ++V TP + V KKL V ++R+G M + L ++R D+ +LP D+ +R +L DP++ATG SA A+ +L + VP ++I+F+ L++APEG+ P +K+ + +D LNE Sbjct: 7 FPNLFILDHPL-IQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRNLPITTRRVATPLVEVDAPVIAGKKLAIVPVLRAGIGMSDGLLDLVPSARVGHIGVYRADDHRPVEYLVRLP-DLEDRVFILCDPMVATGYSAVHAVDVLKRRNVPAANIVFVALVAAPEGVQVFQDAHPDVKLYVASLDSHLNE 196
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BURP6 (Uracil phosphoribosyltransferase OS=Burkholderia pseudomallei (strain 668) GN=upp PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.551e-15 Identity = 56/192 (29.17%), Postives = 95/192 (49.48%), Query Frame = 1 Query: 34 YPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609 +PN++++ I+ T +RD+ S F + L+ +LP T K+V TP + V KKL V ++R+G M + L ++R D+ +LP D+ +R +L DP++ATG SA AI +L +GVP ++FL L++APEG+ P +K+ + +D L++ Sbjct: 7 FPNLFILDHPL-IQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRNLPITTKRVETPLVEIDAPVIAGKKLAIVPVLRAGVGMSDGLLELIPSARVGHIGVYRANDHRPVEYLVRLP-DLEDRIFILCDPMVATGYSAAHAIDVLKRRGVPGERLMFLALVAAPEGVQVFQDAHPDVKLYVASLDSHLDD 196
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BURM1 (Uracil phosphoribosyltransferase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=upp PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.551e-15 Identity = 56/192 (29.17%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 34 YPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609 +PN++++ I+ T +RD+ S F + L+ +LP T K+V TP + V KKL V ++R+G M + L ++R D+ +LP D+ +R +L DP++ATG SA A+ +L + VP ++I+F+ L++APEG+ P +K+ + +D LNE Sbjct: 7 FPNLFILDHPL-IQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRNLPITTKRVETPLVEIDAPVIAGKKLAIVPVLRAGVGMSDGLLDLIPSARVGHIGVYRADDHRPVEYLVRLP-DLEDRIFILCDPMVATGYSAVHAVDVLKRRNVPAANIMFVALVAAPEGVQVFQDAHPDVKLFVASLDSHLNE 196
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BACLD (Uracil phosphoribosyltransferase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=upp PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.551e-15 Identity = 59/177 (33.33%), Postives = 89/177 (50.28%), Query Frame = 1 Query: 85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612 T IRD +F D + L+ LP E V TP + V KKL V I+R+G M + + ++RD + K + Y KLP+D+ ER +++DP+LATG SA +A+ L ++G +I F+ LI+APEG+ V K P + I + +D LNE+ Sbjct: 17 TYIRDVKTGTKEFRELVDEVATLMAFEITRDLPLEEVNVETPVQMAKSNVIAGKKLGVVPILRAGLGMVDGILKLIPAAKVGHVGLYRDPETLKPVEYYVKLPSDVEEREFIVVDPMLATGGSAVEALNSLKKRGA--KNIRFMCLIAAPEGVDEVQKHHPDVDIYIAALDEKLNEK 191
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_LACBA (Uracil phosphoribosyltransferase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=upp PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.332e-15 Identity = 55/177 (31.07%), Postives = 91/177 (51.41%), Query Frame = 1 Query: 85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612 T+IR++ F + + L+ +P +K + TP M KK+ V I+R+G M + + ++RD + + Y KLP+DI +R V ++DP+LATG SA AI L ++G S+I F+ L+SAPEG+ + ++ P + I T+ +D LNE+ Sbjct: 17 TIIRNKDCGTRSFREVVNEISTLMAYEVSRDMPLQDKTIETPVAKMTAKELAGKKVAIVPILRAGIGMVDGILELIPAAKVGHIGMYRDEETLQPHEYFVKLPSDIGQRQVFVVDPMLATGGSAIMAIDALKKRGA--SNIKFVCLVSAPEGVKALREKHPDIDIYTAALDDRLNED 191
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_HELMI (Uracil phosphoribosyltransferase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=upp PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.332e-15 Identity = 57/176 (32.39%), Postives = 89/176 (50.57%), Query Frame = 1 Query: 85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609 + IR + +F + + L+ LP E +V TP T V KKL V+I+R+G M N ++RD + + Y KLP D++ER ++++DP+LATG SA+ A+ LL +KG HI + LI+APEG+ V + P + I + +D LN+ Sbjct: 17 SFIRSKNTGSKEFRELVEEVAMLMAYEVTRELPLVETEVETPVAVAKTKVLAGKKLGVVAILRAGLGMINGFVKLIPAAKVGHVGLYRDPKTLEPVEYYCKLPPDVAERDMIVIDPMLATGGSASAALTLLKQKGA--RHIKLVVLIAAPEGVSRVEQDHPDVDIYAAALDPCLND 190
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BURPS (Uracil phosphoribosyltransferase OS=Burkholderia pseudomallei GN=upp PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.332e-15 Identity = 56/192 (29.17%), Postives = 95/192 (49.48%), Query Frame = 1 Query: 34 YPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609 +PN++++ I+ T +RD+ S F + L+ +LP T K+V TP + V KKL V ++R+G M + L ++R D+ +LP D+ +R +L DP++ATG SA AI +L +GVP ++FL L++APEG+ P +K+ + +D L++ Sbjct: 7 FPNLFILDHPL-IQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRNLPITTKRVETPLVEIDAPVIAGKKLAIVPVLRAGVGMSDGLLELIPSARVGHIGVYRADDHRPVEYLVRLP-DLEDRIFILCDPMVATGYSAAHAIDVLKRRGVPGERLMFLALVAAPEGVQVFQDAHPDVKLYVASLDSHLDD 196 The following BLAST results are available for this feature:
BLAST of CX288999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288999 ID=CX288999; Name=CX288999; organism=Citrus clementina; type=EST; length=612bpback to top |