CX288999
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BURCJ (Uracil phosphoribosyltransferase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=upp PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.683e-15 Identity = 56/192 (29.17%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 34 YPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609 +PN+++ I+ T +RD+ S F + L+ +LP T K+V TP ++ V KKL V ++R+G M + L ++R D+ +LP D+ +R +L DP++ATG SA A+ +L + VP ++I+F+ L++APEG+ P +K+ + +D LNE Sbjct: 7 FPNLFITDHPL-IQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRNLPITTKRVETPLVAVDAPVIAGKKLAIVPVLRAGIGMSDGLLDLVPSARVGHIGVYRADDHRPVEYLVRLP-DLEDRIFILCDPMVATGYSAVHAVDVLKRRNVPAANIMFVALVAAPEGVQVFQDAHPDVKLFVASLDSHLNE 196
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_RHOSR (Uracil phosphoribosyltransferase OS=Rhodococcus sp. (strain RHA1) GN=upp PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.423e-15 Identity = 60/180 (33.33%), Postives = 95/180 (52.78%), Query Frame = 1 Query: 85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTP----TGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDN-GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609 T++R + S + F ++ + L+ L +P E V TP TG + G KKL VSI+R+G + + + ++RD G Y K+P D+ ER V+++DP+LATGNSA A++ L E G P+S I F+ L++ PEG+ + K P + I T+ +D L+E Sbjct: 17 TMMRRKDASTNSFRRLANEISALMTYEVLRDIPMQEIDVETPLEFTTGKVIDG----KKLVFVSILRAGTGILDGMLTIVPGARVGHIGLYRDPKTLGAVEYYFKMPGDLQERDVVVIDPMLATGNSAVAAVERLKECG-PKS-IKFVCLLTCPEGVAALHKAHPDVPIYTAAVDRQLDE 190
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_DIAST (Uracil phosphoribosyltransferase OS=Diaphorobacter sp. (strain TPSY) GN=upp PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.423e-15 Identity = 60/191 (31.41%), Postives = 99/191 (51.83%), Query Frame = 1 Query: 40 NVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609 NV+VI ++ TL+R + S + F L L+ +P + Q+ TP +M V KKL VSI+R+G + + ++RD D + + Y K+P++++ER ++++DP+LATGNSA A+ L K + I F+ L++APEG+ + K P + I T+ ID LN+ Sbjct: 3 NVHVIDHPL-VQHKLTLMRKKDASTNSFRRLLGELSTLMAYEVTRDMPLQDIQIETPLETMTGKVIDGKKLVLVSILRAGNGFLDGMLNVVPGARIGHIGLYRDPDTLQPVEYYFKMPSEMAERDIIVVDPMLATGNSAAAAVARL--KQLQPRSIKFVCLLAAPEGVATLQKAHPDVPIYTAAIDRELND 190
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_CLOPE (Uracil phosphoribosyltransferase OS=Clostridium perfringens GN=upp PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.423e-15 Identity = 59/174 (33.91%), Postives = 88/174 (50.57%), Query Frame = 1 Query: 91 IRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609 IRD+ DF + L+ +LP E ++ TP V KK+ V I+R+G M + + ++RD + + + Y KLP DI+ER V+++DP+LATG SA AI LL ++G + I + LIS+PEGI V K P + I + ID LN+ Sbjct: 19 IRDKNTGSKDFRELVSEVSMLMAYEVTRNLPMEEIEIETPVCKTKCKVLAGKKVAIVPILRAGLGMVDGMLQLIPAAKVGHIGLYRDEETLQPVEYFCKLPQDIAERDVIVVDPMLATGGSAADAITLLKKRGAKQ--IRLMCLISSPEGIEFVQKAHPDVDIYVACIDEKLND 190
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_CLOP1 (Uracil phosphoribosyltransferase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=upp PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.423e-15 Identity = 59/174 (33.91%), Postives = 88/174 (50.57%), Query Frame = 1 Query: 91 IRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609 IRD+ DF + L+ +LP E ++ TP V KK+ V I+R+G M + + ++RD + + + Y KLP DI+ER V+++DP+LATG SA AI LL ++G + I + LIS+PEGI V K P + I + ID LN+ Sbjct: 19 IRDKNTGSKDFRELVSEVSMLMAYEVTRNLPMEEIEIETPVCKTKCKVLAGKKVAIVPILRAGLGMVDGMLQLIPAAKVGHIGLYRDEETLQPVEYFCKLPQDIAERDVIVVDPMLATGGSAADAITLLKKRGAKQ--IRLMCLISSPEGIEFVQKAHPDVDIYVACIDEKLND 190
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_CLOBB (Uracil phosphoribosyltransferase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=upp PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.423e-15 Identity = 55/177 (31.07%), Postives = 89/177 (50.28%), Query Frame = 1 Query: 85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612 +++R + DF + L+ + E ++ TP V KK+ V I+R+G M + + + ++RD + + + Y KLP DI ER V+++DP+LATG SA A+ +L EKG ++ + LISAPEGI V ++ P + I + ID LNE+ Sbjct: 17 SMVRSKDTGSKDFKELVKEISMLLTYEATRDINMDEVEIETPVCKTKCRVVSGKKMAIVPILRAGLGMVDGVLSLIPAAKIGHIGLYRDEETLQPVEYFCKLPKDIEERDVIVVDPMLATGGSAADALTMLKEKGA--KNLKLMCLISAPEGIKLVQEKHPDVDIYVASIDEKLNEK 191
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_CLOBA (Uracil phosphoribosyltransferase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=upp PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.423e-15 Identity = 55/177 (31.07%), Postives = 89/177 (50.28%), Query Frame = 1 Query: 85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612 +++R + DF + L+ + E ++ TP V KK+ V I+R+G M + + + ++RD + + + Y KLP DI ER V+++DP+LATG SA A+ +L EKG ++ + LISAPEGI V ++ P + I + ID LNE+ Sbjct: 17 SMVRSKDTGSKDFKELVKEISMLLTYEATRDINMDEVEIETPVCKTKCRVVSGKKMAIVPILRAGLGMVDGVLSLIPAAKIGHIGLYRDEETLQPVEYFCKLPKDIEERDVIVVDPMLATGGSAADALTMLKEKGA--KNLKLMCLISAPEGIKLVQEKHPDVDIYVASIDEKLNEK 191
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BURS3 (Uracil phosphoribosyltransferase OS=Burkholderia sp. (strain 383) GN=upp PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.423e-15 Identity = 56/192 (29.17%), Postives = 95/192 (49.48%), Query Frame = 1 Query: 34 YPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609 +PN+++ I+ T +RD+ S F + L+ +LP T K+V TP + V KKL V ++R+G M + L ++R D+ +LP D+ +R +L DP++ATG SA A+ +L + VP ++I+F+ L++APEG+ P +K+ + +D LNE Sbjct: 7 FPNLFITDHPL-IQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRNLPITTKRVETPLVEVDAPVIAGKKLAIVPVLRAGIGMSDGLLDLVPSARVGHIGVYRADDHRPVEYLVRLP-DLEDRIFILCDPMVATGYSAVHAVDVLKRRNVPAANIMFVALVAAPEGVQVFQDAHPDVKLFVASLDSHLNE 196
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BURCC (Uracil phosphoribosyltransferase OS=Burkholderia cenocepacia (strain MC0-3) GN=upp PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.423e-15 Identity = 56/192 (29.17%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 34 YPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609 +PN+++ I+ T +RD+ S F + L+ +LP T K+V TP ++ V KKL V ++R+G M + L ++R D+ +LP D+ +R +L DP++ATG SA A+ +L + VP ++I+F+ L++APEG+ P +K+ + +D LNE Sbjct: 7 FPNLFITDHPL-IQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRNLPITTKRVETPLVAVDAPVIAGKKLAIVPVLRAGIGMSDGLLDLVPSARVGHIGVYRAEDHRPVEYLVRLP-DLEDRIFILCDPMVATGYSAVHAVDVLKRRNVPAANIMFVALVAAPEGVQVFQDAHPDVKLFVASLDSHLNE 196
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BURA4 (Uracil phosphoribosyltransferase OS=Burkholderia ambifaria (strain MC40-6) GN=upp PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.423e-15 Identity = 56/192 (29.17%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 34 YPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609 +PN+++ I+ T +RD+ S F + L+ +LP T K+V TP ++ V KKL V ++R+G M + L ++R D+ +LP D+ +R +L DP++ATG SA A+ +L + VP ++I+F+ L++APEG+ P +K+ + +D LNE Sbjct: 7 FPNLFITDHPL-IQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRNLPITTKRVETPLVAVDAPVIAGKKLAIVPVLRAGIGMSDGLLDLVPSARVGHIGVYRAEDHRPVEYLVRLP-DLEDRIFILCDPMVATGYSAVHAVDVLKRRNVPAANIMFVALVAAPEGVQVFQDAHPDVKLFVASLDSHLNE 196 The following BLAST results are available for this feature:
BLAST of CX288999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288999 ID=CX288999; Name=CX288999; organism=Citrus clementina; type=EST; length=612bpback to top |