CX288999

Overview
NameCX288999
Unique NameCX288999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length612
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10785 contig Ccv1_Contig10785:907..1518. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BACSK (Uracil phosphoribosyltransferase OS=Bacillus clausii (strain KSM-K16) GN=upp PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.423e-15
Identity = 56/175 (32.00%), Postives = 84/175 (48.00%), Query Frame = 1 
Query:   91 IRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEE 612
            IRD+     +F    D +  L+       LP    ++ TP G         KKL  V I+R+G  M   +             ++RD +  K    Y KLPND+ ER +L++DP+LATG S  +AI  L ++G     +I   L++APEG+  V K  P + I  + +D  LNE+
Sbjct:   19 IRDKHTGTKEFRELVDEVAALMAFEVTRDLPLEAAEIETPVGPAKVKKLAGKKLGLVPILRAGIGMSEGILRMIPAARVGHVGLYRDPETLKPHEYYVKLPNDVEERELLVIDPMLATGGSVVEAINSLKKRGAKSMRLIC--LVAAPEGVAYVQKEHPDVDIYLAALDEKLNEK 191
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_STRSV (Uracil phosphoribosyltransferase OS=Streptococcus sanguinis (strain SK36) GN=upp PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15
Identity = 56/176 (31.82%), Postives = 89/176 (50.57%), Query Frame = 1 
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            +++R    S   F    D +  L+    L  LP  + ++ TP           KKL  V I+R+G  M + L +           ++RD +  K + Y  KLP DI +R + ++DP+LATG SA  A+  L ++G   SHI F+ L+SAPEG+  + +  P + I T+ +D  LN+
Sbjct:   17 SILRRTDTSTKAFRELVDEIAMLMGYEVLRDLPLEDVEIETPITKTVQKQIAGKKLAIVPILRAGIGMVDGLLSLVPAAKVGHIGMYRDEETLKPVEYLVKLPEDIDQRQIFVVDPMLATGGSAILAVDSLKKRGA--SHITFVCLVSAPEGVKALQEAHPDVDIFTAALDDHLND 190
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_STRGC (Uracil phosphoribosyltransferase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=upp PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15
Identity = 56/176 (31.82%), Postives = 89/176 (50.57%), Query Frame = 1 
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            +++R    S   F    D +  L+    L  LP  + ++ TP           KKL  V I+R+G  M + L +           ++RD +  K + Y  KLP DI +R + ++DP+LATG SA  A+  L ++G   SHI F+ L+SAPEG+  + +  P + I T+ +D  LN+
Sbjct:   17 SILRRTDTSTKAFRELVDEIAMLMGYEVLRDLPLEDVEIETPITKTIQKQIAGKKLAIVPILRAGIGMVDGLLSLVPAAKVGHIGMYRDEETLKPVEYLVKLPEDIDQRQIFVVDPMLATGGSAILAVDSLKKRGA--SHITFVCLVSAPEGVKALQEAHPDVDIFTAALDDHLND 190
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_LACLA (Uracil phosphoribosyltransferase OS=Lactococcus lactis subsp. lactis GN=upp PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15
Identity = 53/176 (30.11%), Postives = 89/176 (50.57%), Query Frame = 1 
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            +++R +  S  +F    D +  L+       LP  + ++ TP           KKL  V I+R+G  M + +             ++RD +  K + Y  KLP DI++R + L+DP+LATG SA  A+  L ++     +I F+ L++APEG+  + K  P ++I T+ +D  LNE
Sbjct:   17 SILRRKEASTKEFRELVDEIGMLMAYEVSRDLPLEDVEIETPVQKTTVKQIAGKKLAIVPILRAGIGMVDGILKLIPAARVGHIGMYRDEETLKPVEYLVKLPADIADRQIFLVDPMLATGGSAILAVDSLKKRNAKAENIKFVCLVAAPEGVKALQKAHPDIEIYTAALDEKLNE 192
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_GEOKA (Uracil phosphoribosyltransferase OS=Geobacillus kaustophilus GN=upp PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15
Identity = 56/176 (31.82%), Postives = 85/176 (48.30%), Query Frame = 1 
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            T IRD+     +F    D +  L+       LP  E ++ TP       V   KKL  + I+R+G  M + +             ++RD    K +  Y KLP+D+ ER  +++DP+LATG SA  AI  L ++G     I F+ LI+APEG+  V    P + I  + +D  LN+
Sbjct:   17 TYIRDKNTGTKEFRELVDEVATLMAFEITRDLPLEEVEIETPVSKARAKVIAGKKLGVIPILRAGIGMVDGILKLIPAAKVGHIGLYRDPQTLKPVEYYVKLPSDVEERDFIIVDPMLATGGSAVAAIDALKKRGA--KSIKFMCLIAAPEGVKAVETAHPDVDIYIAALDERLND 190
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_CLOCE (Uracil phosphoribosyltransferase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=upp PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15
Identity = 59/191 (30.89%), Postives = 98/191 (51.31%), Query Frame = 1 
Query:   40 NVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            NV+V      I+   +L+RD+  +  +F      +  L+      ++P  E ++ TP G   T V   KKL  V I+R+G  M + +             ++RD ++ + + Y  KLP D+ ER +++LDP+LATG SA+ AIQ +  +GV   +I  + LI+A  GI  + K  P + I  + +D  LN+
Sbjct:    3 NVFVFDHPL-IQHKISLLRDKNTNTKEFRELVSEIAMLMGYEVTRNMPLKEVEIETPIGMAKTKVISGKKLGIVPILRAGLGMVDGMLRLIPMAKVGHIGLYRDPESLQPVEYYCKLPVDVEEREIVVLDPMLATGGSASAAIQFIKNRGV--KNIKLMCLIAAKAGIERMQKDHPDVGIYCASVDEILND 190
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BACWK (Uracil phosphoribosyltransferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=upp PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15
Identity = 54/176 (30.68%), Postives = 87/176 (49.43%), Query Frame = 1 
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            T IRD+     DF    D +  L+       LP  + ++ TP     T V   KKL  + I+R+G  M + +             ++RD    + +  Y KLP D+ ER  ++LDP+LATG SA +AI  L ++G  +  I  + +++APEG+  V +  P + I  + +D  LN+
Sbjct:   17 TYIRDKNTGTKDFRELVDEVASLMAFEITRDLPLEDIEIETPVSKATTKVIAGKKLGLIPILRAGLGMVDGILKLIPAAKVGHVGLYRDPKTLQPVEYYVKLPTDVEERDFIVLDPMLATGGSAAEAINSLKKRGAKQ--IKLMCIVAAPEGVKVVQEEHPDVDIYVAALDEKLND 190
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BACHK (Uracil phosphoribosyltransferase OS=Bacillus thuringiensis subsp. konkukian GN=upp PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15
Identity = 54/176 (30.68%), Postives = 87/176 (49.43%), Query Frame = 1 
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            T IRD+     DF    D +  L+       LP  + ++ TP     T V   KKL  + I+R+G  M + +             ++RD    + +  Y KLP D+ ER  ++LDP+LATG SA +AI  L ++G  +  I  + +++APEG+  V +  P + I  + +D  LN+
Sbjct:   17 TYIRDKNTGTKDFRELVDEVASLMAFEITRDLPLKDIEIETPVSKATTKVIAGKKLGLIPILRAGLGMVDGILKLIPAAKVGHVGLYRDPKTLQPVEYYVKLPTDVEERDFIVLDPMLATGGSAAEAINSLKKRGAKQ--IKLMCIVAAPEGVKVVQEEHPDVDIYVAALDEKLND 190
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BACCZ (Uracil phosphoribosyltransferase OS=Bacillus cereus (strain ZK / E33L) GN=upp PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15
Identity = 54/176 (30.68%), Postives = 87/176 (49.43%), Query Frame = 1 
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            T IRD+     DF    D +  L+       LP  + ++ TP     T V   KKL  + I+R+G  M + +             ++RD    + +  Y KLP D+ ER  ++LDP+LATG SA +AI  L ++G  +  I  + +++APEG+  V +  P + I  + +D  LN+
Sbjct:   17 TYIRDKNTGTKDFRELVDEVASLMAFEITRDLPLKDIEIETPVSKATTKVIAGKKLGLIPILRAGLGMVDGILKLIPAAKVGHVGLYRDPKTLQPVEYYVKLPTDVEERDFIVLDPMLATGGSAAEAINSLKKRGAKQ--IKLMCIVAAPEGVKVVQEEHPDVDIYVAALDEKLND 190
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BACCR (Uracil phosphoribosyltransferase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=upp PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15
Identity = 54/176 (30.68%), Postives = 87/176 (49.43%), Query Frame = 1 
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            T IRD+     DF    D +  L+       LP  + ++ TP     T V   KKL  + I+R+G  M + +             ++RD    + +  Y KLP D+ ER  ++LDP+LATG SA +AI  L ++G  +  I  + +++APEG+  V +  P + I  + +D  LN+
Sbjct:   17 TYIRDKNTGTKDFRELVDEVASLMAFEITRDLPLKDIEIETPVSKATTKVIAGKKLGLIPILRAGLGMVDGILKLIPAAKVGHVGLYRDPKTLQPVEYYVKLPTDVEERDFIVLDPMLATGGSAAEAINSLKKRGAKQ--IKLMCIVAAPEGVKVVQEEHPDVDIYVAALDEKLND 190
The following BLAST results are available for this feature:
BLAST of CX288999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
UPP_BACSK7.423e-1532.00Uracil phosphoribosyltransferase OS=Bacillus claus... [more]
UPP_STRSV9.694e-1531.82Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_STRGC9.694e-1531.82Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_LACLA9.694e-1530.11Uracil phosphoribosyltransferase OS=Lactococcus la... [more]
UPP_GEOKA9.694e-1531.82Uracil phosphoribosyltransferase OS=Geobacillus ka... [more]
UPP_CLOCE9.694e-1530.89Uracil phosphoribosyltransferase OS=Clostridium ce... [more]
UPP_BACWK9.694e-1530.68Uracil phosphoribosyltransferase OS=Bacillus weihe... [more]
UPP_BACHK9.694e-1530.68Uracil phosphoribosyltransferase OS=Bacillus thuri... [more]
UPP_BACCZ9.694e-1530.68Uracil phosphoribosyltransferase OS=Bacillus cereu... [more]
UPP_BACCR9.694e-1530.68Uracil phosphoribosyltransferase OS=Bacillus cereu... [more]

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Properties
Property NameValue
Genbank descriptionC02007H02SK IF1 Citrus clementina cDNA clone C02007H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288999 ID=CX288999; Name=CX288999; organism=Citrus clementina; type=EST; length=612bp
ACAAAGCTTGGTCAGCATGACCTCTGCAAAATATATCCCAATGTGTATGT
GATTCAGTCAACATTCCAGATAAGAGGTATGCATACACTGATTCGAGACC
GGGGAATATCGAAGCATGATTTTGTGTTTTATTCAGATCGACTAATTCGG
CTGGTTGTGGAACATGGCCTTGGCCATTTGCCATTCACTGAGAAGCAAGT
AGTGACCCCAACAGGGTCGATGTATACTGGGGTCGATTTTTGCAAGAAAC
TATGTGGGGTCTCCATTGTTCGAAGTGGTGAAAGCATGGAAAATGCATTG
CGTGCATGTTGCAAAGGAATAAAAATTGGAAAAATTCTGATTCACCGTGA
TGGGGACAATGGCAAACAGCTTATCTATGAGAAGCTGCCAAATGATATTT
CAGAAAGACATGTGCTGCTTCTAGATCCTGTTCTTGCCACAGGGAACTCT
GCCAACCAAGCTATTCAACTACTCGTAGAGAAAGGAGTTCCAGAATCCCA
CATTATATTCTTGAATCTCATCTCTGCTCCAGAGGGAATCCATTGTGTTT
GCAAACGTTTTCCATCACTGAAAATTGTCACTTCAGAGATTGATGTTGCT
TTGAATGAAGAA
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