CX288999

Overview
NameCX288999
Unique NameCX288999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length612
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10785 contig Ccv1_Contig10785:907..1518. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BACCQ (Uracil phosphoribosyltransferase OS=Bacillus cereus (strain Q1) GN=upp PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15
Identity = 54/176 (30.68%), Postives = 87/176 (49.43%), Query Frame = 1 
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            T IRD+     DF    D +  L+       LP  + ++ TP     T V   KKL  + I+R+G  M + +             ++RD    + +  Y KLP D+ ER  ++LDP+LATG SA +AI  L ++G  +  I  + +++APEG+  V +  P + I  + +D  LN+
Sbjct:   17 TYIRDKNTGTKDFRELVDEVASLMAFEITRDLPLKDIEIETPVSKATTKVIAGKKLGLIPILRAGLGMVDGILKLIPAAKVGHVGLYRDPKTLQPVEYYVKLPTDVEERDFIVLDPMLATGGSAAEAINSLKKRGAKQ--IKLMCIVAAPEGVKVVQEEHPDVDIYVAALDEKLND 190
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BACC7 (Uracil phosphoribosyltransferase OS=Bacillus cereus (strain AH187) GN=upp PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15
Identity = 54/176 (30.68%), Postives = 87/176 (49.43%), Query Frame = 1 
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            T IRD+     DF    D +  L+       LP  + ++ TP     T V   KKL  + I+R+G  M + +             ++RD    + +  Y KLP D+ ER  ++LDP+LATG SA +AI  L ++G  +  I  + +++APEG+  V +  P + I  + +D  LN+
Sbjct:   17 TYIRDKNTGTKDFRELVDEVASLMAFEITRDLPLKDIEIETPVSKATTKVIAGKKLGLIPILRAGLGMVDGILKLIPAAKVGHVGLYRDPKTLQPVEYYVKLPTDVEERDFIVLDPMLATGGSAAEAINSLKKRGAKQ--IKLMCIVAAPEGVKVVQEEHPDVDIYVAALDEKLND 190
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BACC4 (Uracil phosphoribosyltransferase OS=Bacillus cereus (strain B4264) GN=upp PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15
Identity = 54/176 (30.68%), Postives = 87/176 (49.43%), Query Frame = 1 
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            T IRD+     DF    D +  L+       LP  + ++ TP     T V   KKL  + I+R+G  M + +             ++RD    + +  Y KLP D+ ER  ++LDP+LATG SA +AI  L ++G  +  I  + +++APEG+  V +  P + I  + +D  LN+
Sbjct:   17 TYIRDKNTGTKDFRELVDEVASLMAFEITRDLPLKDIEIETPVSKATTKVIAGKKLGLIPILRAGLGMVDGILKLIPAAKVGHVGLYRDPKTLQPVEYYVKLPTDVEERDFIVLDPMLATGGSAAEAINSLKKRGAKQ--IKLMCIVAAPEGVKVVQEEHPDVDIYVAALDEKLND 190
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BACC3 (Uracil phosphoribosyltransferase OS=Bacillus cereus (strain 03BB102) GN=upp PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15
Identity = 54/176 (30.68%), Postives = 87/176 (49.43%), Query Frame = 1 
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            T IRD+     DF    D +  L+       LP  + ++ TP     T V   KKL  + I+R+G  M + +             ++RD    + +  Y KLP D+ ER  ++LDP+LATG SA +AI  L ++G  +  I  + +++APEG+  V +  P + I  + +D  LN+
Sbjct:   17 TYIRDKNTGTKDFRELVDEVASLMAFEITRDLPLKDIEIETPVSKATTKVIAGKKLGLIPILRAGLGMVDGILKLIPAAKVGHVGLYRDPKTLQPVEYYVKLPTDVEERDFIVLDPMLATGGSAAEAINSLKKRGAKQ--IKLMCIVAAPEGVKVVQEEHPDVDIYVAALDEKLND 190
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BACC2 (Uracil phosphoribosyltransferase OS=Bacillus cereus (strain G9842) GN=upp PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15
Identity = 54/176 (30.68%), Postives = 87/176 (49.43%), Query Frame = 1 
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            T IRD+     DF    D +  L+       LP  + ++ TP     T V   KKL  + I+R+G  M + +             ++RD    + +  Y KLP D+ ER  ++LDP+LATG SA +AI  L ++G  +  I  + +++APEG+  V +  P + I  + +D  LN+
Sbjct:   17 TYIRDKNTGTKDFRELVDEVASLMAFEITRDLPLKDIEIETPVSKATTKVIAGKKLGLIPILRAGLGMVDGILKLIPAAKVGHVGLYRDPKTLQPVEYYVKLPTDVEERDFIVLDPMLATGGSAAEAINSLKKRGAKQ--IKLMCIVAAPEGVKVVQEEHPDVDIYVAALDEKLND 190
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BACC1 (Uracil phosphoribosyltransferase OS=Bacillus cereus (strain ATCC 10987) GN=upp PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15
Identity = 54/176 (30.68%), Postives = 87/176 (49.43%), Query Frame = 1 
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            T IRD+     DF    D +  L+       LP  + ++ TP     T V   KKL  + I+R+G  M + +             ++RD    + +  Y KLP D+ ER  ++LDP+LATG SA +AI  L ++G  +  I  + +++APEG+  V +  P + I  + +D  LN+
Sbjct:   17 TYIRDKNTGTKDFRELVDEVASLMAFEITRDLPLKDIEIETPVSKATTKVIAGKKLGLIPILRAGLGMVDGILKLIPAAKVGHVGLYRDPKTLQPVEYYVKLPTDVEERDFIVLDPMLATGGSAAEAINSLKKRGAKQ--IKLMCIVAAPEGVKVVQEEHPDVDIYVAALDEKLND 190
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BACC0 (Uracil phosphoribosyltransferase OS=Bacillus cereus (strain AH820) GN=upp PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15
Identity = 54/176 (30.68%), Postives = 87/176 (49.43%), Query Frame = 1 
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            T IRD+     DF    D +  L+       LP  + ++ TP     T V   KKL  + I+R+G  M + +             ++RD    + +  Y KLP D+ ER  ++LDP+LATG SA +AI  L ++G  +  I  + +++APEG+  V +  P + I  + +D  LN+
Sbjct:   17 TYIRDKNTGTKDFRELVDEVASLMAFEITRDLPLKDIEIETPVSKATTKVIAGKKLGLIPILRAGLGMVDGILKLIPAAKVGHVGLYRDPKTLQPVEYYVKLPTDVEERDFIVLDPMLATGGSAAEAINSLKKRGAKQ--IKLMCIVAAPEGVKVVQEEHPDVDIYVAALDEKLND 190
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BACAN (Uracil phosphoribosyltransferase OS=Bacillus anthracis GN=upp PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15
Identity = 54/176 (30.68%), Postives = 87/176 (49.43%), Query Frame = 1 
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            T IRD+     DF    D +  L+       LP  + ++ TP     T V   KKL  + I+R+G  M + +             ++RD    + +  Y KLP D+ ER  ++LDP+LATG SA +AI  L ++G  +  I  + +++APEG+  V +  P + I  + +D  LN+
Sbjct:   17 TYIRDKNTGTKDFRELVDEVASLMAFEITRDLPLKDIEIETPVSKATTKVIAGKKLGLIPILRAGLGMVDGILKLIPAAKVGHVGLYRDPKTLQPVEYYVKLPTDVEERDFIVLDPMLATGGSAAEAINSLKKRGAKQ--IKLMCIVAAPEGVKVVQEEHPDVDIYVAALDEKLND 190
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BACAH (Uracil phosphoribosyltransferase OS=Bacillus thuringiensis (strain Al Hakam) GN=upp PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15
Identity = 54/176 (30.68%), Postives = 87/176 (49.43%), Query Frame = 1 
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            T IRD+     DF    D +  L+       LP  + ++ TP     T V   KKL  + I+R+G  M + +             ++RD    + +  Y KLP D+ ER  ++LDP+LATG SA +AI  L ++G  +  I  + +++APEG+  V +  P + I  + +D  LN+
Sbjct:   17 TYIRDKNTGTKDFRELVDEVASLMAFEITRDLPLEDIEIETPVSKATTKVIAGKKLGLIPILRAGLGMVDGILKLIPAAKVGHVGLYRDPKTLQPVEYYVKLPTDVEERDFIVLDPMLATGGSAAEAINSLKKRGAKQ--IKLMCIVAAPEGVKVVQEEHPDVDIYVAALDEKLND 190
[Close]
BLAST of CX288999 vs. ExPASy Swiss-Prot
Match: UPP_BACAC (Uracil phosphoribosyltransferase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=upp PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15
Identity = 54/176 (30.68%), Postives = 87/176 (49.43%), Query Frame = 1 
Query:   85 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLVEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 609
            T IRD+     DF    D +  L+       LP  + ++ TP     T V   KKL  + I+R+G  M + +             ++RD    + +  Y KLP D+ ER  ++LDP+LATG SA +AI  L ++G  +  I  + +++APEG+  V +  P + I  + +D  LN+
Sbjct:   17 TYIRDKNTGTKDFRELVDEVASLMAFEITRDLPLKDIEIETPVSKATTKVIAGKKLGLIPILRAGLGMVDGILKLIPAAKVGHVGLYRDPKTLQPVEYYVKLPTDVEERDFIVLDPMLATGGSAAEAINSLKKRGAKQ--IKLMCIVAAPEGVKVVQEEHPDVDIYVAALDEKLND 190
The following BLAST results are available for this feature:
BLAST of CX288999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
UPP_BACCQ9.694e-1530.68Uracil phosphoribosyltransferase OS=Bacillus cereu... [more]
UPP_BACC79.694e-1530.68Uracil phosphoribosyltransferase OS=Bacillus cereu... [more]
UPP_BACC49.694e-1530.68Uracil phosphoribosyltransferase OS=Bacillus cereu... [more]
UPP_BACC39.694e-1530.68Uracil phosphoribosyltransferase OS=Bacillus cereu... [more]
UPP_BACC29.694e-1530.68Uracil phosphoribosyltransferase OS=Bacillus cereu... [more]
UPP_BACC19.694e-1530.68Uracil phosphoribosyltransferase OS=Bacillus cereu... [more]
UPP_BACC09.694e-1530.68Uracil phosphoribosyltransferase OS=Bacillus cereu... [more]
UPP_BACAN9.694e-1530.68Uracil phosphoribosyltransferase OS=Bacillus anthr... [more]
UPP_BACAH9.694e-1530.68Uracil phosphoribosyltransferase OS=Bacillus thuri... [more]
UPP_BACAC9.694e-1530.68Uracil phosphoribosyltransferase OS=Bacillus anthr... [more]

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Properties
Property NameValue
Genbank descriptionC02007H02SK IF1 Citrus clementina cDNA clone C02007H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288999 ID=CX288999; Name=CX288999; organism=Citrus clementina; type=EST; length=612bp
ACAAAGCTTGGTCAGCATGACCTCTGCAAAATATATCCCAATGTGTATGT
GATTCAGTCAACATTCCAGATAAGAGGTATGCATACACTGATTCGAGACC
GGGGAATATCGAAGCATGATTTTGTGTTTTATTCAGATCGACTAATTCGG
CTGGTTGTGGAACATGGCCTTGGCCATTTGCCATTCACTGAGAAGCAAGT
AGTGACCCCAACAGGGTCGATGTATACTGGGGTCGATTTTTGCAAGAAAC
TATGTGGGGTCTCCATTGTTCGAAGTGGTGAAAGCATGGAAAATGCATTG
CGTGCATGTTGCAAAGGAATAAAAATTGGAAAAATTCTGATTCACCGTGA
TGGGGACAATGGCAAACAGCTTATCTATGAGAAGCTGCCAAATGATATTT
CAGAAAGACATGTGCTGCTTCTAGATCCTGTTCTTGCCACAGGGAACTCT
GCCAACCAAGCTATTCAACTACTCGTAGAGAAAGGAGTTCCAGAATCCCA
CATTATATTCTTGAATCTCATCTCTGCTCCAGAGGGAATCCATTGTGTTT
GCAAACGTTTTCCATCACTGAAAATTGTCACTTCAGAGATTGATGTTGCT
TTGAATGAAGAA
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