CX289149
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289149 vs. ExPASy Swiss-Prot
Match: EIF3H_DROMO (Eukaryotic translation initiation factor 3 subunit H OS=Drosophila mojavensis GN=eIF-3p40 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.382e-27 Identity = 68/163 (41.72%), Postives = 99/163 (60.74%), Query Frame = 3 Query: 69 AAAEEVAPPLRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLR 551 A E+ + VQ +GL ++K+IKHC E S L G LLGL V LE+TNCFPFP + DE ++ + YQL +MR LR VNVD+ VGWYQS+ +G + L+E+ +YQ +I V ++YD +S++G L KA +L+ + +Y+ +FT E R Sbjct: 9 ARNEDSENTINYVQCDGLAVMKMIKHCHEESSNMDLAQGALLGLVVDKCLEITNCFPFP-KSGDETMDEE--MYQLTVMRRLRRVNVDHLHVGWYQSSDVGNSLSLALLESQYHYQTSIEESVVVVYDTQKSSRGFLCLKAYRLTPQAIQMYKDGDFTPEAFR 168
BLAST of CX289149 vs. ExPASy Swiss-Prot
Match: EIF3H_DROPS (Eukaryotic translation initiation factor 3 subunit H OS=Drosophila pseudoobscura pseudoobscura GN=eIF-3p40 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 9.761e-27 Identity = 67/163 (41.10%), Postives = 98/163 (60.12%), Query Frame = 3 Query: 69 AAAEEVAPPLRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLR 551 A E+ + VQ +GL ++K++KHC E S L G LLGL V LE+TNCFPFP + DE ++ + YQL +MR LR VNVD+ VGWYQS+ +G + L+E+ +YQ +I V ++YD +S +G L KA +L+ + +Y+ +FT E R Sbjct: 9 ARTEDSDNTINYVQCDGLAVMKMVKHCHEESSNMDLAQGALLGLVVDKCLEITNCFPFP-KSGDETMDEE--MYQLTVMRRLRRVNVDHLHVGWYQSSDVGNSLSLALLESQYHYQTSIEESVVVVYDTQKSARGFLCLKAYRLTPQAIQMYKDGDFTPEAFR 168
BLAST of CX289149 vs. ExPASy Swiss-Prot
Match: EIF3H_MONBE (Eukaryotic translation initiation factor 3 subunit H OS=Monosiga brevicollis GN=9558 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 5.356e-25 Identity = 62/167 (37.13%), Postives = 100/167 (59.88%), Query Frame = 3 Query: 96 LRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDV---------GSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSW 569 ++ V ++ LV++KIIKH +E V G LLGL ++LEVTNCFP P +D++ ++ YQ++MMR LREVNVD+ VGWYQ+ +G F ++ +Q ++ V +IYDP + QG L+ A +LS+ M+L+ +++F + +RE L++ Sbjct: 30 VKQVTVDALVVMKIIKHARENPHEPVRGPLLGLSQLADASKPGEDALLEVTNCFPTPRVSDDDD-DSIVQQYQVQMMRWLREVNVDHMNVGWYQAADMGTFFDEDVAAVQFQHQRHMAESVVLIYDPVLTLQGTLSLSAFRLSNKAMELFSTDSFNPKAVREAGLTY 195
BLAST of CX289149 vs. ExPASy Swiss-Prot
Match: EIF3H_CHAGB (Eukaryotic translation initiation factor 3 subunit H OS=Chaetomium globosum GN=CHGG_05046 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.193e-24 Identity = 60/160 (37.50%), Postives = 89/160 (55.62%), Query Frame = 3 Query: 144 HCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEED--EEIEADGAN-------------YQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDI 578 HC P TG ++G+D V+E+TN FPFP + + ++D + YQ EM+R L+EVNVD N VGWY S +G F IE +YQ + + V +++D SRS+QGAL+ +A +LS FM ++ FT E L++ L++ DI Sbjct: 28 HCSSSFPTTATGSIVGMDNNGVIEITNAFPFPTVDVSGTDSHQSDATSLAAAAPRAKANIAYQNEMIRHLKEVNVDANNVGWYTSATMGNFINLSFIENQHHYQRDNDKTVALVHDVSRSSQGALSLRAFRLSPEFMAAFKEGKFTTESLQKSKLTFRDI 187
BLAST of CX289149 vs. ExPASy Swiss-Prot
Match: EIF3H_YARLI (Eukaryotic translation initiation factor 3 subunit H OS=Yarrowia lipolytica GN=YALI0F16005g PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.939e-23 Identity = 66/186 (35.48%), Postives = 98/186 (52.69%), Query Frame = 3 Query: 105 VQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADG---------ANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSN------------QG-------ALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDI 578 V I+ V LKI++HC+E +P++V GQLLGLDV L +++ F FP +D A YQ EM+ L+EVNVD+N+VGWYQST+LG A +IE +QE V ++YD + S QG +A +LS+ ++++ +S F L E NL++ D+ Sbjct: 6 VCIDSSVALKIVRHCQESAPSIVAGQLLGLDVDGELRISHAFAFPQNAAGGNPNSDDGLSLRLKAVAKYQPEMIDHLKEVNVDSNSVGWYQSTVLGRIYNASVIENLAVFQEKNPDSVVLVYDVAGSEVVSDTDPSSTGPQGHTTTTPSGFNLRAFRLSEEYLNVRKSGKFDTATLTENNLTYHDV 191
BLAST of CX289149 vs. ExPASy Swiss-Prot
Match: EIF3H_USTMA (Eukaryotic translation initiation factor 3 subunit H OS=Ustilago maydis GN=UM00199 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.249e-22 Identity = 61/174 (35.06%), Postives = 95/174 (54.60%), Query Frame = 3 Query: 105 VQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFP-----IQEEDEEIEADGAN---YQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRR--------CVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDI 578 V+++GL + KI+KHC++ PA +G LLG+D+G LE++N F P E DEE + N Y +M+R LR+VN D N VG YQ LG F + +I+ + R V I++D ++S QG + KA +LS SF+D ++ F + L + L++ +I Sbjct: 57 VRLDGLALTKIVKHCRDAHPASASGALLGMDLGGTLEISNVFALPNPGRSNSERDEEEDRSSRNATRYTSDMVRLLRDVNADANPVGLYQGCFLGAFLNSSVIDGLAAITGLVERDGAGSRGKGVLIVHDLAQSAQGNTSVKAYRLSPSFVDAHKKGKFHTQSLIDHKLTFSNI 230
BLAST of CX289149 vs. ExPASy Swiss-Prot
Match: EIF3H_CAEEL (Eukaryotic translation initiation factor 3 subunit H OS=Caenorhabditis elegans GN=eif-3.H PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 6.342e-18 Identity = 57/179 (31.84%), Postives = 96/179 (53.63%), Query Frame = 3 Query: 87 APPLRVVQIEGLVMLKIIKHC--------KEFSPALVTGQLLGLDV--GSVLEVTNCFPF----PIQEED----EEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSW 569 AP ++ + ++ LV++KI+KH E S G L GL S LE+TNCFP P+ ++D ++ E + L+M+R R +N+D VG+YQS G + +L+E+ +YQ V +IYDP ++ QG L+ +A +LS + +DL N++ E ++ L++ Sbjct: 9 APSVKHILLDSLVVMKIVKHVDSELHAGISEVSGDACAGVLTGLVFLEDSRLEITNCFPTVRNEPVMDDDANAAQQYEEQKQHEMLDMLRKFRTMNIDYEIVGFYQSHQFGAGFSHDLVESMFDYQAMGPENVVLIYDPIKTRQGQLSLRAWRLSTAALDLASKNDWRPELVKAAGLTY 187
BLAST of CX289149 vs. ExPASy Swiss-Prot
Match: EIF3H_CAEBR (Eukaryotic translation initiation factor 3 subunit H OS=Caenorhabditis briggsae GN=eif-3.H PE=3 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 1.413e-17 Identity = 57/179 (31.84%), Postives = 95/179 (53.07%), Query Frame = 3 Query: 87 APPLRVVQIEGLVMLKIIKHC--------KEFSPALVTGQLLGLDV--GSVLEVTNCFPF----PIQEED----EEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSW 569 AP ++ + ++ LV++KI+KH E S G L GL S LE+TNCFP P+ ++D ++ E L+M+R R +N+D VG+YQS G + +L+E+ +YQ V +IYDP ++ QG L+ +A +LS + +DL N++ E ++ L++ Sbjct: 9 APSVKHILLDSLVVMKIVKHVDSELHAGISEVSGDACAGVLTGLVFLEDSRLEITNCFPTVRNEPVIDDDANAAQQYEEQKQQEMLDMLRKFRTMNIDYEIVGFYQSHQFGAGFSHDLVESMFDYQAMGPENVVLIYDPIKTRQGQLSIRAWRLSTAALDLASKNDWRPELVKSAGLTY 187
BLAST of CX289149 vs. ExPASy Swiss-Prot
Match: EIF3H_BRUMA (Eukaryotic translation initiation factor 3 subunit H OS=Brugia malayi GN=Bm1_50170 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.562e-16 Identity = 56/180 (31.11%), Postives = 97/180 (53.89%), Query Frame = 3 Query: 96 LRVVQIEGLVMLKIIKHCK------------EFSPALVTGQLLGLDVGSVLEVTNCFPFPIQE---EDEEIEADGANYQ-------LEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSW 569 ++ VQI+ LV++KI+KH E L+TG L+ +D LE+TNCFP E + +EI + A Y+ L+M+R R++N+D VG+YQ+ G E I++ ++YQ ++ V +IYDP ++ QG L+ +A +LS +++ +++ E R L++ Sbjct: 14 VQFVQIDSLVVMKIVKHVDSEMYAGLNEVAGEACQGLLTG-LVSID-DRRLEITNCFPTARAEPMLDGDEIAQNNAFYEEQKQAEMLDMLRKFRDMNIDYELVGFYQAHPFGACFAQETIDSLIDYQASVPDGVVLIYDPVKTRQGQLSIRAYRLSTKALEMSLDGDWSPESTRTAGLTY 191
BLAST of CX289149 vs. ExPASy Swiss-Prot
Match: EIF3H_SCHPO (Eukaryotic translation initiation factor 3 subunit H OS=Schizosaccharomyces pombe GN=eif3h PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.040e-16 Identity = 50/169 (29.59%), Postives = 88/169 (52.07%), Query Frame = 3 Query: 87 APPLRVVQIEGLVMLKIIKHCKEFSPALVT-GQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGA-------NYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAEL-IETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLS 566 +PP+ V++E L+++ IIKHC++ P + T GQL+G+D+ VL+V++ F P E+EE + + + M+ L+ + VGWY + F ++ +ET YQ+ + +YD S+S+ G L +A +L+ FM + +T L NL+ Sbjct: 14 SPPIERVELESLLVMNIIKHCRDSFPNMGTIGQLVGIDIDGVLQVSSSFESPSVLENEESAVNKSVSGKARQAHTEAMLNRLQYIGAVTGHVGWYLGAYVSSFLSSPFFVETQYAYQKANPNSIAFLYDLSQSSNGTLYMRAYQLTPEFMAAHEEKTWTASSLNSHNLT 182 The following BLAST results are available for this feature:
BLAST of CX289149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289149 ID=CX289149; Name=CX289149; organism=Citrus clementina; type=EST; length=578bpback to top |