CX289149
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289149 vs. ExPASy Swiss-Prot
Match: EIF3H_ARATH (Eukaryotic translation initiation factor 3 subunit H OS=Arabidopsis thaliana GN=TIF3H1 PE=2 SV=2) HSP 1 Score: 311.612 bits (797), Expect = 1.750e-84 Identity = 150/180 (83.33%), Postives = 166/180 (92.22%), Query Frame = 3 Query: 42 TMARSFLQVAAAEE-VAPPLRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDI 578 TMARSFLQ + +E VAPPLRVVQIEGL +LKIIKHCKEFSP LVTGQLLGLDVGSVLEVTNCFPFP++++DEEIEADGANYQLEMMRCLREVNVDNNTVGWYQST+LG +QT ELIETF+NYQENI+RCVCIIYDPS+++ G LA KALKLSDSFM+LYR NFTGEKLREKN SW+DI Sbjct: 3 TMARSFLQAISKDEAVAPPLRVVQIEGLAVLKIIKHCKEFSPTLVTGQLLGLDVGSVLEVTNCFPFPVRDDDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTVLGSYQTVELIETFMNYQENIKRCVCIIYDPSKADLGVLALKALKLSDSFMELYRGGNFTGEKLREKNFSWMDI 182
BLAST of CX289149 vs. ExPASy Swiss-Prot
Match: EIF3H_DICDI (Eukaryotic translation initiation factor 3 subunit H OS=Dictyostelium discoideum GN=eif3h PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 4.214e-46 Identity = 90/162 (55.56%), Postives = 122/162 (75.31%), Query Frame = 3 Query: 96 LRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENI-RRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDI 578 L VVQI+GLV+LKIIK CKE+ P LV GQLLGLD+G+ LEV+NCFPFP +++++E A+YQLEMMR LREVN+D+NTVGWY T L F +IET NYQ I ++CV I+YDP +++QG L+ K +L+ SFM+L++ +F+ E+L + NLS+ DI Sbjct: 16 LDVVQIDGLVVLKIIKQCKEYLPELVPGQLLGLDIGTSLEVSNCFPFPPRDQEDENSESIADYQLEMMRFLREVNIDSNTVGWYTPTYLNSFFNESVIETQYNYQATINQKCVVIVYDPIKTSQGTLSLKCYRLTQSFMELFKDQSFSRERLDQANLSFNDI 177
BLAST of CX289149 vs. ExPASy Swiss-Prot
Match: EIF3H_EMENI (Eukaryotic translation initiation factor 3 subunit H OS=Emericella nidulans GN=AN1270 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.967e-37 Identity = 80/184 (43.48%), Postives = 110/184 (59.78%), Query Frame = 3 Query: 75 AEEVAPPLRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGAN---------------YQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENI-RRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDI 578 AE+ PL V++E LV++KIIKHC + P TG ++G+DV VLE+TN FPFP+ E E D A YQ EM+R LREVNVD N VGWY S +G F +IE YQ+ + R V +++DPSRS QG+L+ +A +LS FM ++ N FT ++L++ NL + DI Sbjct: 2 AEKEVTPLTAVKVEALVVMKIIKHCSQVFPTTATGSIVGMDVDGVLEITNTFPFPVVEVPPESHFDNAAPNPAAAAPRAKANTVYQAEMIRMLREVNVDANNVGWYTSANMGNFVNMNVIENQFFYQKEMNERTVALVHDPSRSAQGSLSLRAFRLSPKFMAAFKDNKFTSDELQKSNLKYQDI 185
BLAST of CX289149 vs. ExPASy Swiss-Prot
Match: EIF3H_NEMVE (Eukaryotic translation initiation factor 3 subunit H OS=Nematostella vectensis GN=v1g168210 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.027e-36 Identity = 75/158 (47.47%), Postives = 107/158 (67.72%), Query Frame = 3 Query: 102 VVQIEGLVMLKIIKHCKE--FSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSW 569 +VQ++GL +LKIIKHC+E S LV G LLGL + LE+TNCFPFP + ++ + D NYQ+E+MR LR VN+D+ VGWYQST LG + L+++ +YQ++I V +IYDP R++QG L KA +LSD M LY+ F+ +KL + +S+ Sbjct: 17 IVQVDGLTVLKIIKHCEEEGSSGDLVQGVLLGLIQDNRLEITNCFPFPSNKAGDDEDDDDVNYQMEVMRRLRAVNIDHLHVGWYQSTYLGSYINRTLLDSQYSYQKSIEESVVLIYDPLRTSQGMLTLKAFRLSDEMMKLYKDGEFSADKLSKAGISF 174
BLAST of CX289149 vs. ExPASy Swiss-Prot
Match: EIF3H_ASPCL (Eukaryotic translation initiation factor 3 subunit H OS=Aspergillus clavatus GN=ACLA_025520 PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.502e-35 Identity = 77/182 (42.31%), Postives = 108/182 (59.34%), Query Frame = 3 Query: 81 EVAPPLRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEAD---------------GANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENI-RRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDI 578 E PL V++E LV++KIIKHC + P TG ++G+DVG LE+TN FPFP+ E E + A YQ EM+R LREVNVD N VGWY S +G F ++E YQ+ + R V +++D SRS+QG+L+ +A +LS FM ++ N FT E+L++ NL + DI Sbjct: 3 EKETPLTAVKVEALVVMKIIKHCSQTFPTTATGSIVGMDVGGTLEITNSFPFPVLEVPSESHFENAPTNPAAAAPRAKGNAAYQAEMIRMLREVNVDANNVGWYTSANMGNFVNMNVVENQFFYQKEMNERTVALVHDVSRSSQGSLSLRAFRLSPKFMTAFKENKFTSEELQKSNLRYQDI 184
BLAST of CX289149 vs. ExPASy Swiss-Prot
Match: EIF3H_ASPFU (Eukaryotic translation initiation factor 3 subunit H OS=Aspergillus fumigatus GN=AFUA_1G09970 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.456e-35 Identity = 76/178 (42.70%), Postives = 106/178 (59.55%), Query Frame = 3 Query: 93 PLRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGAN---------------YQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENI-RRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDI 578 PL V++E LV++KI+KHC + P TG ++G+DVG LE+TN FPFP+ E E D A YQ EM+R LREVNVD N VGWY S +G F +IE YQ+ + R V +++D SRS+QG+L+ +A +LS FM ++ N FT E+L++ L + DI Sbjct: 7 PLTAVKVEALVVMKIMKHCSQTFPTTATGSIVGMDVGGTLEITNSFPFPVVEVPPESHFDNAAANPAAAAPRAKANTVYQAEMIRMLREVNVDANNVGWYTSANMGNFVNMNVIENQFFYQKEMNERTVALVHDVSRSSQGSLSLRAFRLSPKFMTAFKENKFTSEELQKSGLRYQDI 184
BLAST of CX289149 vs. ExPASy Swiss-Prot
Match: EIF3H_ASPFC (Eukaryotic translation initiation factor 3 subunit H OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_009410 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.456e-35 Identity = 76/178 (42.70%), Postives = 106/178 (59.55%), Query Frame = 3 Query: 93 PLRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGAN---------------YQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENI-RRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDI 578 PL V++E LV++KI+KHC + P TG ++G+DVG LE+TN FPFP+ E E D A YQ EM+R LREVNVD N VGWY S +G F +IE YQ+ + R V +++D SRS+QG+L+ +A +LS FM ++ N FT E+L++ L + DI Sbjct: 7 PLTAVKVEALVVMKIMKHCSQTFPTTATGSIVGMDVGGTLEITNSFPFPVVEVPPESHFDNAAANPAAAAPRAKANTVYQAEMIRMLREVNVDANNVGWYTSANMGNFVNMNVIENQFFYQKEMNERTVALVHDVSRSSQGSLSLRAFRLSPKFMTAFKENKFTSEELQKSGLRYQDI 184
BLAST of CX289149 vs. ExPASy Swiss-Prot
Match: EIF3H_XENLA (Eukaryotic translation initiation factor 3 subunit H OS=Xenopus laevis GN=eif3h PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.833e-34 Identity = 72/163 (44.17%), Postives = 111/163 (68.10%), Query Frame = 3 Query: 96 LRVVQIEGLVMLKIIKHCKE--FSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDI 578 ++ VQI+GLV+LKIIKH +E +V G LLGL V LE+TNCFPFP Q +++++ D YQ+EMMR LR VN+D+ VGWYQST G F + L+++ +YQ I V +IYDP +++QG+L+ KA +L+ M++ + +F+ E L++ N+++ D+ Sbjct: 18 VKQVQIDGLVVLKIIKHYQEEGHGSEVVQGVLLGLVVDDRLEITNCFPFP-QHTEDDVDFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTFYGTFVSRALLDSQFSYQHAIEESVVLIYDPIKTSQGSLSLKAYRLTPKLMEICKEKDFSAEGLKKANVAYEDM 179
BLAST of CX289149 vs. ExPASy Swiss-Prot
Match: EIF3H_XENTR (Eukaryotic translation initiation factor 3 subunit H OS=Xenopus tropicalis GN=eif3h PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 8.244e-34 Identity = 71/163 (43.56%), Postives = 110/163 (67.48%), Query Frame = 3 Query: 96 LRVVQIEGLVMLKIIKHCKE--FSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDI 578 ++ VQI+G+V+LKIIKH +E +V G LLGL V LE+TNCFPFP Q +++++ D YQ+EMMR LR VN+D+ VGWYQST G F + L+++ +YQ I V +IYDP ++ QG+L+ KA +L+ M++ + +F+ E L++ N+++ D+ Sbjct: 19 VKQVQIDGMVVLKIIKHYQEEGHGSEVVQGVLLGLVVDDRLEITNCFPFP-QHTEDDVDFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTFYGTFVSRALLDSQFSYQHAIEESVVLIYDPIKTGQGSLSLKAYRLTPKLMEVCKEKDFSAEGLKKANIAFEDM 180
BLAST of CX289149 vs. ExPASy Swiss-Prot
Match: EIF3H_TAEGU (Eukaryotic translation initiation factor 3 subunit H OS=Taeniopygia guttata GN=EIF3H PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.133e-33 Identity = 76/171 (44.44%), Postives = 113/171 (66.08%), Query Frame = 3 Query: 63 QVAAAEEVAPPLRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSW 569 + AAA + A ++ VQI+GLV+LKIIKH +E +V G LLGL V LE+TNCFPFP Q +++ + D YQ+EMMR LR VN+D+ VGWYQST G F T L+++ +YQ I V +IYDP ++ QG+L+ KA +L+ M++ + +F+ E L++ N+++ Sbjct: 23 KAAAAGDSA--VKQVQIDGLVVLKIIKHYQEEGQGNEVVQGVLLGLVVDDRLEITNCFPFP-QHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANIAY 190 The following BLAST results are available for this feature:
BLAST of CX289149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289149 ID=CX289149; Name=CX289149; organism=Citrus clementina; type=EST; length=578bpback to top |