CX289264
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289264 vs. ExPASy Swiss-Prot
Match: UPL3_ARATH (E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana GN=UPL3 PE=1 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 3.299e-87 Identity = 157/205 (76.59%), Postives = 172/205 (83.90%), Query Frame = 1 Query: 1 PRPWPPSADASEGGQFSKVIEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIICRKQHLESMTSDNCEEAVDLRFRGAPIEDLCLDFTLPGYPDYILKPGDENVDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHG 615 PRPWP +AD SEGGQF KVIEYFRLLGRVMAKALQDGRLLD+P STAFYKL+LG ELDLHDI+ FDAE GK LQEL V++ RK +LE + DN DL RG IEDL L+FTLPGYP+YIL+ GDE VDI NLEEYISLVVDATVK G+ RQ+EAFR+GFNQVFDITSLQIFTP ELD+LLCGRRELWE LAEHIKFDHG Sbjct: 1570 PRPWPSTADISEGGQFHKVIEYFRLLGRVMAKALQDGRLLDVPLSTAFYKLILGQELDLHDIVLFDAELGKTLQELRVVVARKHYLEGVGGDNSSTISDLCLRGCRIEDLSLEFTLPGYPEYILRSGDEIVDITNLEEYISLVVDATVKRGVTRQIEAFRSGFNQVFDITSLQIFTPSELDYLLCGRRELWEVETLAEHIKFDHG 1774
BLAST of CX289264 vs. ExPASy Swiss-Prot
Match: UPL4_ARATH (E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana GN=UPL4 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 7.943e-49 Identity = 105/207 (50.72%), Postives = 133/207 (64.25%), Query Frame = 1 Query: 1 PRPWPPSADASEGGQFSKVIEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIICRKQHLESMTSDNCEEAVDLRFRGAPIEDLCLDFTLPGYPDYILKPGDEN--VDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHG 615 PRPW ++ S+ V++ F LLG V+AKALQDGR+LDLP S AFYKL+LG EL DI D E K L EL ++ RK+ D+ DL F G IEDLCL+F LPGY DY L P N V+++NLEEYI +V+ATV GI +Q+EAFR+GFNQVF I L+IF EL+ +LCG +L+ + +HIKFDHG Sbjct: 1200 PRPWSGTSTTSD------VLQKFVLLGTVVAKALQDGRVLDLPLSKAFYKLILGQELSSFDIHFVDPELCKTLVELQALVRRKKLFAEAHGDSGAAKCDLSFHGTKIEDLCLEFALPGYTDYDLAPYSANDMVNLDNLEEYIKGIVNATVCNGIQKQVEAFRSGFNQVFSIEHLRIFNEEELETMLCGECDLFSMNEVLDHIKFDHG 1400
BLAST of CX289264 vs. ExPASy Swiss-Prot
Match: TRIPC_HUMAN (Probable E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens GN=TRIP12 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.899e-34 Identity = 85/209 (40.67%), Postives = 122/209 (58.37%), Query Frame = 1 Query: 16 PSADASEGGQFSKVIEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDL--HDIIPFDAEFGKILQELHVIICRKQHLE---SMTSDNCEEAVD-LRFRGAPIEDLCLDFTLPGYPDYILKPGDEN--VDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCG-RRELWEPAALAEHIKFDHG 615 P ++ +KV FR LG++MAKA+ D RL+DLP FYK +L E L HD+ D + + L I+ +K+ LE S T ++ + A++ L G +EDL LDFTLPG+P+ LK G ++ V I+NLEEY+ LV+ + G+ RQ ++FR GF VF ++ LQ F P ELD LLCG + + W+ L E + DHG Sbjct: 1680 PFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLTMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDGFESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHG 1888
BLAST of CX289264 vs. ExPASy Swiss-Prot
Match: YDE1_SCHPO (Probable ubiquitin fusion degradation protein C12B10.01c OS=Schizosaccharomyces pombe GN=SPAC12B10.01c PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.321e-19 Identity = 66/207 (31.88%), Postives = 102/207 (49.28%), Query Frame = 1 Query: 1 PRPWPPSADASEGGQFSKVIEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIICRKQHLESMTSDNCEEAVDLRFRGAPIEDLCLDFTLPGYPDYILKPGDENVDIN--NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHG 615 P P P + E + I F LG+ +A+++ D R++ + F+ F+ + L + + D L+ L +I K + T D++ +EDL LDFTLPG+P L P + + N+ +Y++ V+D TV G+ +Q+EAF+ GF+ VF TSLQ+ T HEL L E W A L + I DHG Sbjct: 1355 PSPIPLLGSSPEN---ERKISLFFALGQFVARSIYDSRIISIQFNPLFFARNI--PLTISSVAKVDKGLANSLRYLEKLIPGKNPTNAET--------DIK-----LEDLHLDFTLPGFPSIELIPDGASTPVTTFNVSDYLNYVIDYTVGKGVQQQLEAFQNGFSSVFPYTSLQVLTEHELVTLFGTVDEDWSYATLMKSIVADHG 1543
BLAST of CX289264 vs. ExPASy Swiss-Prot
Match: UFD4_YEAST (Ubiquitin fusion degradation protein 4 OS=Saccharomyces cerevisiae GN=UFD4 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.255e-18 Identity = 63/192 (32.81%), Postives = 99/192 (51.56%), Query Frame = 1 Query: 52 KVIEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDLHDI--IPFDAEFGKILQELHVIICRKQHLESMTSDNCEEAVDLRFRGAPIEDLCLDFTLPGYPDYILKPGDENVDIN--NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHG 615 KVIE F LG +A++L D R+LD FS F++L+ H + ++ +P D E ++ EL ++ + + + + V + +E L L FT+PG D L PG N +N N+EEYI V+D + GI +Q++AF GF++VF + I P EL + E W A L ++ +HG Sbjct: 1199 KVIELFGYLGTFVARSLLDNRILDFRFSKVFFELL--HRMSTPNVTTVPSDVETCLLMIEL---------VDPLLAKSLKYIVANKDDNMTLESLSLTFTVPGNDDIELIPGGCNKSLNSSNVEEYIHGVIDQILGKGIEKQLKAFIEGFSKVFSYERMLILFPDELVDIFGRVEEDWSMATLYTNLNAEHG 1379
BLAST of CX289264 vs. ExPASy Swiss-Prot
Match: UPL2_ARATH (E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana GN=UPL2 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 2.755e-17 Identity = 59/173 (34.10%), Postives = 91/173 (52.60%), Query Frame = 1 Query: 58 IEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIICRKQHLESMTSDNCEEAVDLRFRGAPIEDLCLDFTLPGYPDYILKPGDENVDI--NNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRREL 570 + YF+ +GR++AKAL DG+LLD+ F+ +FYK +LG ++ HDI D ++ K L+ L LE+ SD +DL F E+ + + DY LKPG N+ + EY+ LV D + + I Q+ AF G N++ + IF EL+ L+ G E+ Sbjct: 3382 LSYFKFVGRMVAKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWL---------LENDVSD----ILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVADHILTSAIRPQINAFLEGLNELIPRELVSIFNDKELELLISGLPEI 3541
BLAST of CX289264 vs. ExPASy Swiss-Prot
Match: UPL1_ARATH (E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana GN=UPL1 PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 4.700e-17 Identity = 59/173 (34.10%), Postives = 90/173 (52.02%), Query Frame = 1 Query: 58 IEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIICRKQHLESMTSDNCEEAVDLRFRGAPIEDLCLDFTLPGYPDYILKPGDENVDI--NNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRREL 570 + YF+ +GR++AKAL DG+LLD+ F+ +FYK +LG ++ HDI D ++ K L+ L LE+ SD +DL F E+ + + DY LKPG N+ + EY+ LV + I Q+ AF GFN++ + IF EL+ L+ G E+ Sbjct: 3405 LSYFKFVGRMVAKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWL---------LENDVSD----ILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVAGHILTNAIRPQINAFLEGFNELIPRELVSIFNDKELELLISGLPEI 3564
BLAST of CX289264 vs. ExPASy Swiss-Prot
Match: NEDD4_DROME (E3 ubiquitin-protein ligase Nedd-4 OS=Drosophila melanogaster GN=Nedd4 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.579e-15 Identity = 52/170 (30.59%), Postives = 82/170 (48.24%), Query Frame = 1 Query: 58 IEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIICRKQHLESMTSDNCEEAVDLRFRGAPIEDLCLDFTLPGYPD-YILKPGDENVDINN--LEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCG 558 + YF+ +GR+ A+ G+LLD F FYK++L +DL D+ D E+ L + +N ++L F CLD + G + LKPG N+D+ N +EYI LV++ + QM +F GF + + ++IF HEL+ L+CG Sbjct: 739 LSYFKFIGRIAGMAVYHGKLLDAFFIRPFYKMMLQKPIDLKDMESVDTEYYNSLMWI--------------KENDPRILELTF--------CLDEDVFGQKSQHELKPGGANIDVTNENKDEYIKLVIEWRFVARVKEQMSSFLDGFGSIIPLNLIKIFDEHELELLMCG 886
BLAST of CX289264 vs. ExPASy Swiss-Prot
Match: WWP2_MOUSE (NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Mus musculus GN=Wwp2 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.280e-14 Identity = 59/186 (31.72%), Postives = 92/186 (49.46%), Query Frame = 1 Query: 58 IEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIICRKQHLESMTSDNCEEAVDLRFRGAPIEDLCLDFTLPGYPDYILKPGDENVDIN--NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRREL----WEPAALAEH 597 + YFR +GR +A AL G+ +D F+ FYK +L L D+ D EF ++ ++ +LE E ++L F I+D+ + L + LK G EN+ + N EEYI L+ D G+ Q +AF GFN+V + L+ F EL+ +LCG +E+ W+ A+ H Sbjct: 602 LTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYN-----SIVWIKENNLE-------ECGLELFF----IQDMEI---LGKVTTHELKEGGENIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVAPLEWLRYFDEKELELMLCGMQEIDMSDWQKNAIYRH 768
BLAST of CX289264 vs. ExPASy Swiss-Prot
Match: ITCH_HUMAN (E3 ubiquitin-protein ligase Itchy homolog OS=Homo sapiens GN=ITCH PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.280e-14 Identity = 57/186 (30.65%), Postives = 86/186 (46.24%), Query Frame = 1 Query: 58 IEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIICRKQHLESMTSDNCEEAVDLRFRGAPIEDLCLDFTLPGYPDYILKPGDENVDIN--NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRREL----WEPAALAEH 597 ++YFR +GR +A AL G+ +D FS FYK +L + L D+ D EF L +N E DL + +++ L + LKP N+ + N EEYI +V + + G+ Q +AF GFN++ LQ F EL+ LLCG +E+ W+ A+ H Sbjct: 635 LKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSL--------------IWVKENNIEECDLEMYFSVDKEI-----LGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSRGVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRH 801 The following BLAST results are available for this feature:
BLAST of CX289264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289264 ID=CX289264; Name=CX289264; organism=Citrus clementina; type=EST; length=615bpback to top |