CX289594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_PYRKO (Peptidyl-tRNA hydrolase OS=Pyrococcus kodakaraensis GN=pth PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 7.085e-19 Identity = 48/108 (44.44%), Postives = 65/108 (60.19%), Query Frame = 1 Query: 4 RQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 R+DLK+ GK A Q AH A + + + W GQ K+VV +N +E+ KL AE GLPT ++ DAG T++ G+ TVLAIGPGP+ +VD VTG +LL Sbjct: 11 RKDLKLSKGKFAVQVAHGAVTAAIKAQKEKPEWFKAWFHEGQKKVVVKAENLEELFKLKAEAEKLGLPTALIKDAGLTEIPPGTVTVLAIGPGPEEVVDKVTGHLKLL 118
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_PYRHO (Peptidyl-tRNA hydrolase OS=Pyrococcus horikoshii GN=pth PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 9.253e-19 Identity = 46/108 (42.59%), Postives = 66/108 (61.11%), Query Frame = 1 Query: 4 RQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 R DLK+ GK+A+Q AH A E + R W + GQ K+VV ++++E+ KL AE GLP ++ DAG T++ G+ TVLA+GP P+ +VD VTG +LL Sbjct: 14 RADLKLSKGKLAAQVAHGAVTAAFEAYKKKREWFEAWFREGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLTEIPPGTVTVLAVGPAPEEIVDKVTGNLKLL 121
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_PYRAB (Peptidyl-tRNA hydrolase OS=Pyrococcus abyssi GN=pth PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 9.253e-19 Identity = 48/109 (44.04%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 VR+DLK+ GK+A Q AH A + + R KW GQ K+VV ++ E+ KL AE LPT ++ DAG T++ G+ TVLAIGPGP ++D VTG +LL Sbjct: 13 VRKDLKLSKGKLAVQVAHGAVTAAFKAYKEKREWFEKWFHEGQKKVVVKVESLDELFKLKAEAEKLNLPTALIQDAGLTEIPPGTITVLAIGPGPSEIIDKVTGHLKLL 121
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_SULIY (Peptidyl-tRNA hydrolase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pth PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.209e-18 Identity = 48/113 (42.48%), Postives = 70/113 (61.95%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSD----RHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 VR D+KMG GK+A+Q AHAA + ++ S+ + L +W Q GQPKIVV + E+ + AE LP ++ DAG+TQ+ G+ T L IGP P++L+D +TG +LL Sbjct: 8 VRSDIKMGKGKMAAQVAHAAVTLVISIINSNNSRWKEWLNEWLQQGQPKIVVKANSLDEIILRSKKAETMNLPFSIIEDAGKTQLEPGTITCLGIGPAPENLIDPITGDLKLL 120
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_SULIN (Peptidyl-tRNA hydrolase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pth PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.209e-18 Identity = 48/113 (42.48%), Postives = 70/113 (61.95%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSD----RHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 VR D+KMG GK+A+Q AHAA + ++ S+ + L +W Q GQPKIVV + E+ + AE LP ++ DAG+TQ+ G+ T L IGP P++L+D +TG +LL Sbjct: 8 VRSDIKMGKGKMAAQVAHAAVTLVISIINSNNSRWKEWLNEWLQQGQPKIVVKANSLDEIILRSKKAETMNLPFSIIEDAGKTQLEPGTITCLGIGPAPENLIDPITGDLKLL 120
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_SULIM (Peptidyl-tRNA hydrolase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pth PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.209e-18 Identity = 48/113 (42.48%), Postives = 70/113 (61.95%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSD----RHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 VR D+KMG GK+A+Q AHAA + ++ S+ + L +W Q GQPKIVV + E+ + AE LP ++ DAG+TQ+ G+ T L IGP P++L+D +TG +LL Sbjct: 8 VRSDIKMGKGKMAAQVAHAAVTLVISIINSNNSRWKEWLNEWLQQGQPKIVVKANSLDEIILRSKKAETMNLPFSIIEDAGKTQLEPGTITCLGIGPAPENLIDPITGDLKLL 120
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_SULIL (Peptidyl-tRNA hydrolase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pth PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.209e-18 Identity = 48/113 (42.48%), Postives = 70/113 (61.95%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSD----RHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 VR D+KMG GK+A+Q AHAA + ++ S+ + L +W Q GQPKIVV + E+ + AE LP ++ DAG+TQ+ G+ T L IGP P++L+D +TG +LL Sbjct: 8 VRSDIKMGKGKMAAQVAHAAVTLVISIINSNNSRWKEWLNEWLQQGQPKIVVKANSLDEIILRSKKAETMNLPFSIIEDAGKTQLEPGTITCLGIGPAPENLIDPITGDLKLL 120
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_SULIK (Peptidyl-tRNA hydrolase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pth PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.209e-18 Identity = 48/113 (42.48%), Postives = 70/113 (61.95%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSD----RHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 VR D+KMG GK+A+Q AHAA + ++ S+ + L +W Q GQPKIVV + E+ + AE LP ++ DAG+TQ+ G+ T L IGP P++L+D +TG +LL Sbjct: 8 VRSDIKMGKGKMAAQVAHAAVTLVISIINSNNSRWKEWLNEWLQQGQPKIVVKANSLDEIILRSKKAETMNLPFSIIEDAGKTQLEPGTITCLGIGPAPENLIDPITGDLKLL 120
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_SULIA (Peptidyl-tRNA hydrolase OS=Sulfolobus islandicus (strain M.16.27) GN=pth PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.209e-18 Identity = 48/113 (42.48%), Postives = 70/113 (61.95%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSD----RHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 VR D+KMG GK+A+Q AHAA + ++ S+ + L +W Q GQPKIVV + E+ + AE LP ++ DAG+TQ+ G+ T L IGP P++L+D +TG +LL Sbjct: 8 VRSDIKMGKGKMAAQVAHAAVTLVISIINSNNSRWKEWLNEWLQQGQPKIVVKANSLDEIILRSKKAETMNLPFSIIEDAGKTQLEPGTITCLGIGPAPENLIDPITGDLKLL 120
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH2_YEAST (Peptidyl-tRNA hydrolase 2 OS=Saccharomyces cerevisiae GN=PTH2 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.578e-18 Identity = 45/114 (39.47%), Postives = 70/114 (61.40%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRH------LLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 324 +RQDL M GKIA+QC HAA + + + + ++W GQ KI + C ++ M++L+ A + G+ V+ DAGRTQ++AGS TVL +GP PK+++D +TG +L Sbjct: 100 IRQDLGMTKGKIAAQCCHAALSCFRHIATNPARASYNPIMTQRWLNAGQAKITLKCPDKFTMDELYAKAISLGVNAAVIHDAGRTQIAAGSATVLGLGPAPKAVLDQITGDLKL 213 The following BLAST results are available for this feature:
BLAST of CX289594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289594 ID=CX289594; Name=CX289594; organism=Citrus clementina; type=EST; length=451bpback to top |