CX289594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH2_BOVIN (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus GN=PTRH2 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 3.508e-26 Identity = 53/108 (49.07%), Postives = 76/108 (70.37%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 324 VR DLKMG GK+A+QC+HAA Y ++ + + LL++WE CGQPK+VV +++ + +L A+ GL ++ DAGRTQ++ GS+TVL IGPGP L+D VTG +L Sbjct: 71 VRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPELLKEWEYCGQPKVVVKAPDEETLVELLTHAKVLGLTVSLIQDAGRTQIAPGSRTVLGIGPGPADLIDKVTGHLKL 178
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH2_HUMAN (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens GN=PTRH2 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.021e-25 Identity = 52/108 (48.15%), Postives = 75/108 (69.44%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 324 VR DLKMG GK+A+QC+HAA Y ++ + + +L++WE CGQPK+VV +++ + L A+ GL ++ DAGRTQ++ GS+TVL IGPGP L+D VTG +L Sbjct: 71 VRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPEMLKQWEYCGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGRTQIAPGSQTVLGIGPGPADLIDKVTGHLKL 178
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH2_MOUSE (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus GN=Ptrh2 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.879e-25 Identity = 52/108 (48.15%), Postives = 72/108 (66.67%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 324 VR DLKMG GK+A+QC+HAA Y + + +L++WE CGQPK+VV ++ + +L A+ GL ++ DAGRTQ+ GS+TVL IGPGP L+D VTG +L Sbjct: 73 VRTDLKMGKGKVAAQCSHAAVSAYKQTQRRSPQVLKEWEYCGQPKVVVKAPDEDTLIQLLTHAKTLGLTVSLIQDAGRTQIEPGSRTVLGIGPGPVELIDEVTGHLKL 180
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH2_DROME (Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster GN=CG1307 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 1.380e-22 Identity = 53/109 (48.62%), Postives = 68/109 (62.39%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 VR DLKMG GKIA+QC H A G Y + LLR WE CG KI V +++ E+ + + AE L T ++ DAGRTQ+ A SKTVLA+GP + +D VTG +LL Sbjct: 78 VRNDLKMGKGKIAAQCGHGAVGAYQRAVVRTPRLLRSWENCGCAKIAVRVESEAELMAIKKEAERQQLNTCLIRDAGRTQIEANSKTVLAVGPAAAADIDRVTGHLKLL 186
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_SULTO (Peptidyl-tRNA hydrolase OS=Sulfolobus tokodaii GN=pth PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.992e-21 Identity = 53/113 (46.90%), Postives = 70/113 (61.95%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHL----LRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 VR DL MG GKIA+Q AHAA + +++ S L L KW + GQPKIVV + E+NK +E A LPT ++ DAG+TQ+ G+ T + IGP P LVD +TG +LL Sbjct: 9 VRTDLDMGKGKIAAQVAHAAVSLVLDILNSSNSLWKEWLYKWLEEGQPKIVVKVPSLDELNKRYEKAIELNLPTTIIQDAGKTQIEPGTITCIGIGPAPVELVDKITGDLKLL 121
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_PYRFU (Peptidyl-tRNA hydrolase OS=Pyrococcus furiosus GN=pth PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.202e-20 Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 1 Query: 4 RQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 R DLK+ GK+A Q AH A E + R W + GQ K+VV +N++E+ KL AE GLPT ++ DAG T++ G+ TVLAIGPGP+ +VD VTG +LL Sbjct: 12 RSDLKLSKGKLAVQVAHGAVTAAFEAYKKKREWFEAWFREGQKKVVVKAQNEEELFKLKSEAEKLGLPTALIRDAGLTEIPPGTITVLAIGPGPEEVVDKVTGHLKLL 119
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH2_SCHPO (Probable peptidyl-tRNA hydrolase 2 OS=Schizosaccharomyces pombe GN=SPAC19A8.14 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.202e-20 Identity = 51/108 (47.22%), Postives = 67/108 (62.04%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 324 VR DL M GKIA+QCAHAA Y D L+R WE GQ KI + + ++ + L A + GL V+ DAGRTQ+++GS TVL IGPGP S+++ VTG +L Sbjct: 97 VRTDLGMTKGKIAAQCAHAALACYKIASAVDPDLVRIWENAGQAKITLQAQTEETLELLQAQAMSLGLCARVIHDAGRTQIASGSATVLGIGPGPVSVINEVTGSLKL 204
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_SULAC (Peptidyl-tRNA hydrolase OS=Sulfolobus acidocaldarius GN=pth PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.757e-20 Identity = 49/114 (42.98%), Postives = 70/114 (61.40%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSD-----RHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 VR DL MG GKIA+Q AHAA + E++Q + L W GQPKIV+ KN E+ + + A +GLP ++ DAG+TQ+ G+ T IGPGP+ ++D++TG +LL Sbjct: 7 VRTDLDMGKGKIAAQVAHAAVSLVLEIVQKRSKAEWKEWLEMWINQGQPKIVLKVKNLDELLEKYNKALQSGLPATIIQDAGKTQIEPGTITCAGIGPGPEEMIDNITGDLKLL 120
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_METS5 (Peptidyl-tRNA hydrolase OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=pth PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.408e-20 Identity = 51/111 (45.95%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQ--SDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 VR D+ MG GKIA+Q AHAA + + M S R L W GQPK+VV + +++ + A + GLPT V++DAGRTQV G+ T IGPGP L+D +TG +LL Sbjct: 7 VRTDINMGKGKIAAQVAHAAVSLVLDCMSRSSWRDWLDSWLHEGQPKVVVKVSSLEDLLSRVDKARSQGLPTTVISDAGRTQVEPGTVTCAGIGPGPDDLIDKITGDLKLL 117
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_SULSO (Peptidyl-tRNA hydrolase OS=Sulfolobus solfataricus GN=pth PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.180e-19 Identity = 49/113 (43.36%), Postives = 70/113 (61.95%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSD----RHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 VR D+KMG GKIA+Q AHAA + ++ S+ + L +W GQPKI+V + E+ + AE LP ++ DAG+TQ+ G+ T L IGP P++LVDS+TG +LL Sbjct: 8 VRSDIKMGKGKIAAQVAHAAVTLVVSIINSNNLRWKEWLNEWLHQGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGKTQLEPGTITCLGIGPAPENLVDSITGDLKLL 120 The following BLAST results are available for this feature:
BLAST of CX289594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289594 ID=CX289594; Name=CX289594; organism=Citrus clementina; type=EST; length=451bpback to top |