CX289594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH2_DICDI (Probable peptidyl-tRNA hydrolase 2 OS=Dictyostelium discoideum GN=pth2 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.692e-18 Identity = 43/108 (39.81%), Postives = 68/108 (62.96%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 324 +R DL M GKI +QC HA+ G + ++ + +LR+WE G KI + +++E+ L A+ G+ +++V D+G TQ+ +GS TVLA+GP PK VD+VT +L Sbjct: 102 IRTDLGMTKGKIIAQCCHASLGARQKALKDSKKVLRQWENFGCAKITLKANSKEELVDLRNKAKELGVVSYLVLDSGHTQIPSGSATVLAVGPAPKEAVDAVTKHLKL 209
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_CALMQ (Peptidyl-tRNA hydrolase OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=pth PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 3.516e-18 Identity = 47/109 (43.12%), Postives = 68/109 (62.39%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 VR DL+M GK+A Q AHAA E +++ + W GQ KIV+ + +++ +L AE+ GLPT ++ DAG T++ G+ T LAIGPGP+ LV+ VTG +LL Sbjct: 10 VRGDLRMSRGKLAVQVAHAAVSAVLEALRNRGDWVNAWVSGGQKKIVLVVDSVEDLIRLKAKAESLGLPTALIEDAGLTELPPGTVTALAIGPGPEELVNKVTGSLKLL 118
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_HALSA (Peptidyl-tRNA hydrolase OS=Halobacterium salinarium GN=pth PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 4.592e-18 Identity = 45/103 (43.69%), Postives = 67/103 (65.05%), Query Frame = 1 Query: 4 RQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTG 312 R D+ MG GK+A+Q AHA+ Y +D +R+W+ GQ K+VV +++E+ + E A+ GLPT +++DAGRTQ+ G+ T LAIGP P + VD +TG Sbjct: 8 RTDIGMGQGKLAAQVAHASLNAYE---YTDDRAVRRWKDEGQTKVVVKVGSERELYERSEEAKRAGLPTGLISDAGRTQLEPGTPTALAIGPAPDADVDQITG 107
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_HALS3 (Peptidyl-tRNA hydrolase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=pth PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 4.592e-18 Identity = 45/103 (43.69%), Postives = 67/103 (65.05%), Query Frame = 1 Query: 4 RQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTG 312 R D+ MG GK+A+Q AHA+ Y +D +R+W+ GQ K+VV +++E+ + E A+ GLPT +++DAGRTQ+ G+ T LAIGP P + VD +TG Sbjct: 8 RTDIGMGQGKLAAQVAHASLNAYE---YTDDRAVRRWKDEGQTKVVVKVGSERELYERSEEAKRAGLPTGLISDAGRTQLEPGTPTALAIGPAPDADVDQITG 107
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_METKA (Peptidyl-tRNA hydrolase OS=Methanopyrus kandleri GN=pth PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.023e-17 Identity = 46/109 (42.20%), Postives = 71/109 (65.14%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 VR DLK+ GK+A+Q AHA+ G + +S + +W + GQ K+V+ CK+++E+ +L E+A+ GLP+F+V DAG T++ G+ T L IGP + +D VTG LL Sbjct: 8 VRGDLKLSRGKLAAQVAHASLGAFLRAKESGAPV-EEWLREGQKKVVLKCKDKEELLELHELAKRRGLPSFLVRDAGLTELEPGTVTCLGIGPEREEEIDRVTGDLPLL 115
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_THEON (Peptidyl-tRNA hydrolase OS=Thermococcus onnurineus (strain NA1) GN=pth PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.336e-17 Identity = 43/109 (39.45%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 +R+DLK+ GK+A Q AH A ++ + + W GQ K+VV +N++E+ +L AE G+PT ++ DAG T++ G+ T LA+GP P+ LVD VTG +L+ Sbjct: 10 IRKDLKLSKGKMAVQVAHGAVTAALKVQKEKPEWFKAWFHEGQKKVVVKAENERELFELKAHAEKLGIPTALIRDAGLTEIPPGTITCLAVGPAPEELVDKVTGHLKLV 118
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_METTH (Peptidyl-tRNA hydrolase OS=Methanobacterium thermoautotrophicum GN=pth PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.745e-17 Identity = 42/109 (38.53%), Postives = 66/109 (60.55%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 VR DLKMG GKIA+Q HA+ G + +++ +RKWE G K++V+ + E+ +++ + G+ ++V DAG TQ+ AG+ T L IGP +D +TG +LL Sbjct: 7 VRSDLKMGKGKIAAQACHASIGSFK---RTEEDKIRKWELEGSKKVIVSVNSLDELLEIYRAVKEAGISNYLVRDAGHTQIPAGTITCLGIGPDDDEKIDKITGDLKLL 112
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_HALMA (Peptidyl-tRNA hydrolase OS=Haloarcula marismortui GN=pth PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 6.631e-17 Identity = 45/103 (43.69%), Postives = 62/103 (60.19%), Query Frame = 1 Query: 4 RQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTG 312 R D+ MG GK+A+Q AHA+ Y + R + W+ GQ K+V+ ++ E+ +L +VAE GLP VV DAG TQ+ G+ T LA+GP LVD VTG Sbjct: 8 RADIGMGEGKLAAQVAHASLSAYEDAGPKPR---KAWKGAGQKKVVLKATSESELFELADVAEREGLPHAVVRDAGHTQLDPGTVTALAVGPAEDELVDRVTG 107
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_THESM (Peptidyl-tRNA hydrolase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=pth PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 4.298e-16 Identity = 41/109 (37.61%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 VR DLK+ GK+A Q AH A + + + W GQ K+VV ++++E+ +L AE G+P ++ DAG T++ G+ T LAIGPGP+ +V+ +TG +L+ Sbjct: 10 VRSDLKLSKGKLAVQVAHGAVTAAFKAYKEKPEWFKGWFNEGQKKVVVKAESERELFELKAEAEKLGIPNSLIRDAGLTEIPPGTITCLAIGPGPEEIVNKITGNLKLV 118
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_THEAC (Peptidyl-tRNA hydrolase OS=Thermoplasma acidophilum GN=pth PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 5.614e-16 Identity = 43/109 (39.45%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 VR+DL MG GKIA+Q AHAA M+ +R + +W GQ KIVV + E+ ++ +A++ G+ +V D G TQV G+ T + +GP + +D +TGK +LL Sbjct: 9 VRKDLDMGKGKIAAQVAHAAVTCAIRSMKINRDVFNEWYDEGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYTQVEPGTITCIGLGPDEEEKLDKITGKYKLL 117 The following BLAST results are available for this feature:
BLAST of CX289594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289594 ID=CX289594; Name=CX289594; organism=Citrus clementina; type=EST; length=451bpback to top |