CX289594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_STAMF (Peptidyl-tRNA hydrolase OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=pth PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 7.332e-16 Identity = 42/109 (38.53%), Postives = 62/109 (56.88%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 VR D+KM GK+A Q AHAA E + R +W GQ KIVV +++++ K E+A+ LP ++ DAG T++ + T + IGPGP +D +TG +LL Sbjct: 13 VRTDIKMSKGKLAVQVAHAAVSAAFEAYKKKREWFLEWWATGQKKIVVKGGSERDLLKYAEMAKKKDLPVAIIRDAGLTELPPNTLTAVGIGPGPSRKIDEITGDLKLL 121
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_AERPE (Peptidyl-tRNA hydrolase OS=Aeropyrum pernix GN=pth PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 7.332e-16 Identity = 44/112 (39.29%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQC----GQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 324 VR+DL MG GK A+Q AHA+ +++S R R+W + GQ K+V+ ++ E+ +++ A GLP V DAG+TQ+ G+ T A+GP P LVD +TG +L Sbjct: 12 VRRDLGMGRGKAAAQAAHASCEAVFLILESGRPEWRRWLEMWRLQGQAKVVLRVESLAELQEVYSKAVEEGLPASFVRDAGKTQLEPGTPTAAAVGPAPSRLVDRITGGLKL 123
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH2_CAEEL (Probable peptidyl-tRNA hydrolase 2 OS=Caenorhabditis elegans GN=C24G6.8 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 7.332e-16 Identity = 48/107 (44.86%), Postives = 70/107 (65.42%), Query Frame = 1 Query: 13 LKMGSGKIASQCAHAATGMYAELMQSD--RHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 LKMG+GKIA+Q HA G+Y + M S+ ++ + W + GQ KIVV ++ +++ L +VA++ G ++V DAG TQ+ AGS+TVL I G VDSVTG +LL Sbjct: 211 LKMGTGKIAAQVGHATLGVYRQAMNSENGQNAIAAWTRHGQVKIVVKGQSTEQLMDLCKVAKDAGCYYYLVQDAGYTQIPAGSRTVLGIF-GTVEQVDSVTGGLKLL 316
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_PYRAE (Peptidyl-tRNA hydrolase OS=Pyrobaculum aerophilum GN=pth PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.251e-15 Identity = 46/110 (41.82%), Postives = 63/110 (57.27%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSD--RHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 324 +R DLK+ GK A+Q HAA M R L +W + GQ KIV+T + + +L E A++ GLPT VV DAG T++ G+ T + +GP P LVD VTG +L Sbjct: 9 IRGDLKISCGKAAAQAGHAAVECVLAAMGDAKWRKWLDQWLEEGQKKIVLTADDAAHLYQLHERAKSLGLPTAVVIDAGLTELPPGTPTAICVGPAPDELVDKVTGSLKL 118
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_METBU (Peptidyl-tRNA hydrolase OS=Methanococcoides burtonii (strain DSM 6242) GN=pth PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.251e-15 Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 +R DLK+ GK+A Q AHAA +SD L W++ GQ K+V+ + Q++ +L E A GL T ++ DAG T+++ G+ TVL IGP +D VTG +L+ Sbjct: 10 IRDDLKLSKGKLAVQVAHAAVSAAEWASRSD---LENWKEGGQKKVVLRVEKLQDLFELKEKARREGLSTALITDAGLTEIAPGTVTVLGIGPARADYIDKVTGNLKLV 115
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_METAC (Peptidyl-tRNA hydrolase OS=Methanosarcina acetivorans GN=pth PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.251e-15 Identity = 45/108 (41.67%), Postives = 64/108 (59.26%), Query Frame = 1 Query: 4 RQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 R DLK+ GK A Q AHAA +SD L KW++ GQ KIV+ +++ +L E A GLPT ++ DAG T++ AG+ TVL IGP + ++D VT +L+ Sbjct: 11 RDDLKLSKGKFAVQVAHAALSAAEWASKSD---LEKWKEGGQKKIVLRVPTIKDLYELKEKARREGLPTALIQDAGLTEIPAGTVTVLGIGPAKEEVIDKVTRDLKLV 115
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_THEVO (Peptidyl-tRNA hydrolase OS=Thermoplasma volcanium GN=pth PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.633e-15 Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 VR+DL MG GKIA+Q AHAA + M+ + + +W GQ KIVV N E+ + + A++ G+ V+ D G TQV G+ T + +GP + +D +TGK +LL Sbjct: 9 VRKDLDMGKGKIAAQVAHAAVSCAIKAMKEKKKIFDEWMDEGQKKIVVKVPNVDEIYIIKKKADSMGIINEVIQDRGYTQVEPGTVTCIGLGPDYEVYLDDITGKYKLL 117
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_METBF (Peptidyl-tRNA hydrolase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=pth PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.133e-15 Identity = 44/108 (40.74%), Postives = 63/108 (58.33%), Query Frame = 1 Query: 4 RQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 R+DLK+ GK A Q AHAA ++D L KW++ GQ KIV+ ++ +L E A GLPT ++ DAG T++ G+ TVL IGP + L+D VT +L+ Sbjct: 11 REDLKLSKGKFAVQVAHAAISASEWASKND---LEKWKEGGQKKIVLKVPTLNDLYELKEKARREGLPTALIQDAGLTEIPPGTVTVLGIGPAKEELIDKVTRNLKLV 115
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_ARCFU (Peptidyl-tRNA hydrolase OS=Archaeoglobus fulgidus GN=pth PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.133e-15 Identity = 48/109 (44.04%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 VR DLK+ GK+A Q AHAA Y ++SD L RKW GQ K+V+ K+ +E+ + AE+ GL T +V DAG T+V G+ T + IGP + +D VTG LL Sbjct: 9 VRDDLKLSRGKLAVQVAHAAIIGY---LKSDSSLRRKWLDEGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLTEVPPGTITAVVIGPDEERKIDKVTGNLPLL 114
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_METMA (Peptidyl-tRNA hydrolase OS=Methanosarcina mazei GN=pth PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 2.786e-15 Identity = 44/108 (40.74%), Postives = 63/108 (58.33%), Query Frame = 1 Query: 4 RQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 R DLK+ GK A Q AHAA + D L KW++ GQ KIV+ + +E+ +L E A GLPT ++ DAG T++ G+ TVL IGP + L+D +T +L+ Sbjct: 11 RDDLKLSKGKFAVQVAHAALSAAEWASKGD---LEKWKEGGQKKIVLKVPSIKELYELKEKARREGLPTALIQDAGLTEIPPGTVTVLGIGPAKEELIDKITKDLKLV 115 The following BLAST results are available for this feature:
BLAST of CX289594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289594 ID=CX289594; Name=CX289594; organism=Citrus clementina; type=EST; length=451bpback to top |