CX289594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_HALLT (Peptidyl-tRNA hydrolase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=pth PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 6.207e-15 Identity = 39/103 (37.86%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 4 RQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTG 312 R D+ MG GK+A+Q AHA+ Y + + R + +KW+ GQ K+V+ ++ ++ +L + A+ G+P ++ DAG TQ+ G+ T LA+GP VD VTG Sbjct: 8 RTDIGMGEGKLAAQVAHASLSAYQD---AGRRVRKKWQGEGQKKVVLKGDSESQLFELADKADKEGIPYAIIRDAGHTQLEPGTVTALAVGPARDDTVDRVTG 107
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_METJA (Peptidyl-tRNA hydrolase OS=Methanocaldococcus jannaschii GN=pth PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.059e-14 Identity = 37/109 (33.94%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 +R DL MG GK+ +Q HA + + + + + +W + GQ K+VV +++E+ ++ A + GLP ++ DAG TQ+ G+ T +AIGP +D +TG +LL Sbjct: 7 IRNDLGMGKGKMVAQGGHAIIEAFLDAKRKNPRAVDEWLREGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGHTQLEPGTLTAVAIGPEKDEKIDKITGHLKLL 115
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_METM7 (Peptidyl-tRNA hydrolase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pth PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.254e-14 Identity = 38/109 (34.86%), Postives = 61/109 (55.96%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 +R DLKMG GK+A+Q HA+ + + + W GQ K+V+ +++E+ ++++ GLP ++ DAGRTQV GS T + IGP + + VT +LL Sbjct: 8 IRNDLKMGKGKMAAQACHASIQAFLHAQKISSSAVSGWMNEGQKKVVLKVNSEKELLEIFKNVNIEGLPCSLIRDAGRTQVEPGSLTAVGIGPEKEEKISKVTKDLKLL 116
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_METVS (Peptidyl-tRNA hydrolase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pth PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 6.862e-14 Identity = 37/109 (33.94%), Postives = 60/109 (55.05%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 +R DLKMG GK+A+Q HA+ Y + + W GQ K+V+ +++E+ +++ GLP ++ DAG+TQ+ GS T + IGP + + VT +LL Sbjct: 8 IRNDLKMGKGKMAAQACHASIQAYLHAQKISPSAVMYWMNEGQKKVVLKVNSEKELLEIFRDVNIDGLPCSLIRDAGKTQIEPGSLTAVGIGPEKEDKISKVTKNLKLL 116
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_METM6 (Peptidyl-tRNA hydrolase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pth PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 6.862e-14 Identity = 37/109 (33.94%), Postives = 61/109 (55.96%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 +R DLKMG GK+A+Q HA+ + + + W GQ K+V+ +++E+ ++++ GLP ++ DAGRTQ+ GS T + IGP + + VT +LL Sbjct: 8 IRNDLKMGKGKMAAQACHASLQAFLHAQKISSSAVSGWMNEGQKKVVLKVNSEKELLEIFKNVNIEGLPCSLIRDAGRTQIEPGSLTAVGIGPEKEEKISKVTKDLKLL 116
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_METM5 (Peptidyl-tRNA hydrolase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pth PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 6.862e-14 Identity = 37/109 (33.94%), Postives = 61/109 (55.96%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 +R DLKMG GK+A+Q HA+ + + + W GQ K+V+ +++E+ ++++ GLP ++ DAGRTQ+ GS T + IGP + + VT +LL Sbjct: 8 IRNDLKMGKGKMAAQACHASIQAFLHAQKISSSAVSGWMNEGQKKVVLKVNSEKELLEIFKNVNIEGLPCSLIRDAGRTQIEPGSLTAVGIGPEKEEKISKVTKDLKLL 116
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_HALWD (Peptidyl-tRNA hydrolase OS=Haloquadratum walsbyi (strain DSM 16790) GN=pth PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.171e-13 Identity = 40/107 (37.38%), Postives = 62/107 (57.94%), Query Frame = 1 Query: 4 RQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 324 R DL+MG GK+A+Q AHA+ + ++W+ GQ KIV+ +++++ +L + AE G+P VV DAG TQ+ G+ T +AIGP +D +TG L Sbjct: 8 RADLRMGKGKLAAQVAHASLSAVEDTGTRSE---KQWKGGGQKKIVLKANSEKKLFQLADEAERDGIPHAVVRDAGHTQLEPGTVTCIAIGPDSDENIDRITGSLSL 111
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_META3 (Peptidyl-tRNA hydrolase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=pth PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.529e-13 Identity = 34/109 (31.19%), Postives = 66/109 (60.55%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 +R DLKMG GK+ +Q +HA+ + +++ + ++W GQ K+V+ +++E+ +++ A G ++ DAG TQ+ +G+ T + IGP + ++ +TGK +LL Sbjct: 8 LRNDLKMGKGKLVAQGSHASLISFLNTQKNNPSVAKEWLNEGQKKVVLKVNSEKELFEVFRDANIDGFSCCLIRDAGHTQIPSGTATAVGIGPDKEEKLEKITGKLKLL 116
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_METMP (Peptidyl-tRNA hydrolase OS=Methanococcus maripaludis GN=pth PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.406e-13 Identity = 36/109 (33.03%), Postives = 60/109 (55.05%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 327 +R DLKMG GK+A+Q HA+ + + + W GQ K+V+ +++E+ ++++ GLP ++ DAGRTQ+ GS T + IGP + + V +LL Sbjct: 8 IRNDLKMGKGKMAAQACHASIQAFLHAQKISSSAVSGWMNEGQKKVVLKVNSEKELLEIFKNVNIEGLPCSLIRDAGRTQIEPGSLTAVGIGPEKEEKISKVKKDLKLL 116
BLAST of CX289594 vs. ExPASy Swiss-Prot
Match: PTH_NANEQ (Peptidyl-tRNA hydrolase OS=Nanoarchaeum equitans GN=pth PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.188e-11 Identity = 32/108 (29.63%), Postives = 62/108 (57.41%), Query Frame = 1 Query: 1 VRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 324 V + L +G GK+ +Q AHA+ ++ ++++ L +W + G K+V+ + +E+ + + A G+ ++ DAG+TQVS G+ +A+GP +D +TG +L Sbjct: 7 VCRKLDIGKGKLCAQVAHASLDAALKVYRNNKELFDRWYREGAKKVVLKVNSLEELLDIAKKAMEKGIVVSIIRDAGKTQVSPGTIICIALGPDEDEKIDQITGNLKL 114 The following BLAST results are available for this feature:
BLAST of CX289594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289594 ID=CX289594; Name=CX289594; organism=Citrus clementina; type=EST; length=451bpback to top |