CX290269
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB43_MOUSE (Ras-related protein Rab-43 OS=Mus musculus GN=Rab43 PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.224e-41 Identity = 86/178 (48.31%), Postives = 121/178 (67.98%), Query Frame = 3 Query: 78 MAGYKP---DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQ-ESLYFMETSALDATNVENAFTEVLTQI 599 MAG P DE YD+LFKLVL+GD+ VGK+ ++ RF F+ STIGV+F ++L I K VK QIWDTAGQER+R IT +YYR A GA+L YD+++ +TF +V W+ ++R++ NI+ +LIGNK+DL V + ++ AE + L +ETSA D++NVE AFT V T++ Sbjct: 1 MAGPGPGDQDEHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADFREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATEL 178
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.904e-41 Identity = 83/167 (49.70%), Postives = 111/167 (66.47%), Query Frame = 3 Query: 102 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL-RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 599 +YDYL KL+LIGDSGVGKS LL RF+ F +TIG++F R++ +D K +K QIWDTAGQER+R IT+AYYRGA+G LLVYDVT ++F N+ W+R + +H N+ +L+GNK D+ AV T G+A A++ + F ETSA NVE F + I Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 4.954e-41 Identity = 95/215 (44.19%), Postives = 129/215 (60.00%), Query Frame = 3 Query: 102 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPS-----KGETINVKDDSSVLKRIGCCST 731 E+DYLFKL+LIGDS VGKS L RF + + STIGV+F R++ ++ K VK QIWDTAGQER+R ITS+YYRGA G ++VYD+T +F NV +WL E+ + + ++ +L+GNK DL AV T +A+A++ + F+ETSA ++ NVE AF + I K +AGS PS KG I + K CCST Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKK------SKAGSQAALERKPSNVVQMKGRPIQQEQQ----KSSRCCST 208
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB4B_DANRE (Ras-related protein Rab-4B OS=Danio rerio GN=rab4b PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.470e-41 Identity = 82/167 (49.10%), Postives = 110/167 (65.87%), Query Frame = 3 Query: 99 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 599 E YD+LFK ++IG +G GKS LL +F +N+F +S TIGVEF +R + + K VK QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ + WL + R PNI+++L GNK DL V+ + FA++ L F+ETSAL NVE AF + I Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARSI 169
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 8.450e-41 Identity = 81/167 (48.50%), Postives = 113/167 (67.66%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 605 YD+L KL+LIGDSGVGKS LL RF+ F +TIG++F R++ ++ K +K QIWDTAGQER+R IT+AYYRGA+G LLVYDVT +F ++ W+R + +H ++ MLIGNK D+ V + GK+ A++ + F+ETSA ++ NVE AF + I K Sbjct: 12 YDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDMTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKK 178
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB1_THEAN (Ras-related protein Rab-1 OS=Theileria annulata GN=rab1 PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 8.450e-41 Identity = 86/188 (45.74%), Postives = 122/188 (64.89%), Query Frame = 3 Query: 99 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGR-WLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTL 659 +EYDYLFK+++IGDSG GKS+LL RF N ++ STIGV+F ++++IDN +K QIWDTAGQER+R ITS YYRGA G + VYDVT +F ++ WL+++ ++ N+ +LIGNK DL V ++ K AEQ ++ ++E SA +NVE AF T I K + + + SN ST+ Sbjct: 2 KEYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLVDSRVVLADEAKHVAEQNNMNYIEASAKTDSNVEKAF----TTIAKALKDKVTQYPSNAPTSTV 185
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.104e-40 Identity = 83/169 (49.11%), Postives = 112/169 (66.27%), Query Frame = 3 Query: 99 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 605 + YDYL KL+LIGDSGVGKS LL RF+++ F +TIG++F R++ +D K +K QIWDTAGQER+R IT+AYYRGA+G LL+YDVT +F NV W + +H N+ +LIGNK D VS E G+A A++ + F+E SA NV+ AF + +I K Sbjct: 4 KSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKK 172
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.441e-40 Identity = 83/166 (50.00%), Postives = 112/166 (67.47%), Query Frame = 3 Query: 102 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 599 E+D+ FK++LIGDSGVGKS LL RF + + STIGV+F ++L +D K +K QIWDTAGQER+R ITS+YYRGA G +LVYD T +F NV +W+ E+ + N+ +L+GNKTDL + V + K+FAE + F+ETSA +ATNVE F + I Sbjct: 6 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVGNKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDI 171
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: YPTV2_VOLCA (GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.194e-40 Identity = 84/167 (50.30%), Postives = 110/167 (65.87%), Query Frame = 3 Query: 102 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL-RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 599 +YD L KL+L+GDSGVGKS LL RFT + F +TIG++F + + +D K+VK QIWDTAGQER+R ITSAYYRGA G +LVYD+T A+F NV W+R + +H N+ +L+GNK DL VS G+A A++ F ETSA D +VE AF V + Sbjct: 9 DYDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDNVNKILVGNKLDLAEDKRVVSIARGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDV 175
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.477e-40 Identity = 80/195 (41.03%), Postives = 129/195 (66.15%), Query Frame = 3 Query: 99 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETIN 683 E+YD+LFK+VLIG++GVGK+ L+ RFT+ F +TIGV+F +++ I+ + VK QIWDTAGQER+R+IT +YYR A +L YD+T +F+ + WLRE+ ++ +I +L+GNK DL VS + + F+E + +Y++ETSA ++ NVE F ++ +++S+ N +S LP +G++I+ Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLAC---RLISEARQNTLVNNVSSPLPGEGKSIS 195 The following BLAST results are available for this feature:
BLAST of CX290269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290269 ID=CX290269; Name=CX290269; organism=Citrus clementina; type=EST; length=735bpback to top |