CX290269
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 382.874 bits (982), Expect = 9.798e-106 Identity = 188/218 (86.24%), Postives = 207/218 (94.95%), Query Frame = 3 Query: 78 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCST 731 M GY+ D+EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT++L +D KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF+N RWL+ELR+HTDPNI+VMLIGNK+DLRHLVAV TEDGK+FAE+ESLYFMETSAL+ATNVENAFTEVLTQIY+IVSKRAVEAG +G++S LPSKG+TINVK+DSSVLKR GCCST Sbjct: 1 MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEAGDSGSSSGLPSKGQTINVKEDSSVLKRFGCCST 218
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1) HSP 1 Score: 369.392 bits (947), Expect = 1.121e-101 Identity = 182/217 (83.87%), Postives = 200/217 (92.17%), Query Frame = 3 Query: 78 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 728 MAGYK D+EYDYLFKLVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+SL ID KV+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+ GRWL+ELR+HTDPNI+VMLIGNK+DLRHLV VSTEDGKAFAE+ESLYFMETSAL+ATNVENAF+EVLTQIY+IVSKRAVEAG + S +PS+G+TINV +DSSVL R CCS Sbjct: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGDRPSTSVVPSQGQTINVNEDSSVLNRYRCCS 217
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 369.392 bits (947), Expect = 1.121e-101 Identity = 183/217 (84.33%), Postives = 201/217 (92.63%), Query Frame = 3 Query: 78 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 728 MAGY+ DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT++ +++ KVVKAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTRHATF+N RWLRELR HTDPNI+VMLIGNK DLRHLVAV TE+ KAFAE+ESLYFMETSALDATNVENAFTEVLTQI+KIVSKR+V+ G G ++ LP KGETINVK+D SVLKR+GCCS Sbjct: 1 MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGG--GESADLPGKGETINVKEDGSVLKRMGCCS 215
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1) HSP 1 Score: 367.851 bits (943), Expect = 3.262e-101 Identity = 178/218 (81.65%), Postives = 199/218 (91.28%), Query Frame = 3 Query: 78 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCST 731 MAGY+ D+EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+SL IDNKV+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH T++NV RWL+ELR+HTDPNI+VMLIGNK+DLRHLVAVST++ K AE+E LYFMETSAL+ATNVENAFTE LTQIY+IVSK+AVEAG G S+ P KGETIN+KD+ S K+ GCCS+ Sbjct: 1 MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAGDEGATSSAPPKGETINIKDEGSSWKKFGCCSS 218
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2) HSP 1 Score: 354.755 bits (909), Expect = 2.857e-97 Identity = 173/216 (80.09%), Postives = 201/216 (93.06%), Query Frame = 3 Query: 81 AGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 728 AGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSL++D KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWL+ELR+HTDPNI+VML+GNK+DLRHLVAV T++GKAFAE+ESLYFMETSAL++TNVENAF EVLTQIY+IVSKR+VEAG + A + P KGE IN+KDD S +K+ GCCS Sbjct: 3 AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDD--AGSGPGKGEKINIKDDVSAVKKGGCCS 216
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1) HSP 1 Score: 349.362 bits (895), Expect = 1.200e-95 Identity = 172/217 (79.26%), Postives = 197/217 (90.78%), Query Frame = 3 Query: 78 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 728 MAGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATR+L++D KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF+NV RWL+EL+ HTDPNI+VML+GNK+DLRHL+AV TEDGK++AEQESL FMETSAL+ATNVE+AF EVLTQIY+I SK+ VEAG +G AS KGE I VK+D S LK++GCCS Sbjct: 1 MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNASV--PKGEKIEVKNDVSALKKLGCCS 215
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1) HSP 1 Score: 345.895 bits (886), Expect = 1.327e-94 Identity = 170/217 (78.34%), Postives = 197/217 (90.78%), Query Frame = 3 Query: 78 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 728 MAGY+ D+EYDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRSL +D+KV+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV WL+ELR HTDPNI+VML+GNK+DLRHLVAV TED K+FAE+ESLYFMETSAL+ATNVENAF EVLTQI+ IVSK+A+EA S ++ +PSKG+ I++ D S +K+ GCCS Sbjct: 1 MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASE--SANVPSKGDKIDIGKDVSAVKKGGCCS 215
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 335.109 bits (858), Expect = 2.343e-91 Identity = 163/217 (75.12%), Postives = 197/217 (90.78%), Query Frame = 3 Query: 84 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINV-KDDSSVLKRIGCCST 731 GY+ +++YDYLFKLVLIGDSGVGKSNLLSRF++NEFNLESKSTIGVEFATRS+R+D+K+VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TRH TF+NV RWL+ELR+HTD NI++ML+GNK DLRHL AVSTED KAFAE+E+ +FMETSAL++ NVENAFTEVLT+IYK+V ++A+E G + A LP KG+TINV KDD S +K++GCCS+ Sbjct: 4 GYRAEDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGDDPAA--LP-KGQTINVGKDDVSAVKKVGCCSS 217
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 5.414e-80 Identity = 146/215 (67.91%), Postives = 177/215 (82.33%), Query Frame = 3 Query: 87 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCST 731 ++ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M+ GNK+DL HL AVS +DG A +E+E L F+ETSAL+ATN+E AF +LT+IY IVSK+A+ A +++P +G TINV D S K+ GCCST Sbjct: 3 HRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEATAGASVPGQGTTINVADTSGNTKK-GCCST 216
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 3.509e-79 Identity = 147/212 (69.34%), Postives = 176/212 (83.02%), Query Frame = 3 Query: 96 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCST 731 D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M+ GNK+DL+HL AVS EDG+A AE+E L F+ETSAL+A N+E AF +LT+IY I+SK+A+ A +S LP +G TINV D+S +R CCST Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAA--QEASSNLPGQGTTINVA-DASANQRRSCCST 214 The following BLAST results are available for this feature:
BLAST of CX290269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290269 ID=CX290269; Name=CX290269; organism=Citrus clementina; type=EST; length=735bpback to top |