CX290269
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB4A_RAT (Ras-related protein Rab-4A OS=Rattus norvegicus GN=Rab4a PE=2 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 6.056e-39 Identity = 79/167 (47.31%), Postives = 110/167 (65.87%), Query Frame = 3 Query: 99 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 599 E YD+LFK ++IG++G GKS LL +F + +F +S TIGVEF ++ + + K VK QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ + WL + R NI+++L GNK DL V+ + FA++ L F+ETSAL NVE AF + +I Sbjct: 3 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKI 169
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.056e-39 Identity = 80/175 (45.71%), Postives = 115/175 (65.71%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 629 YD LFKL+LIGDSGVGK+ +L RF+ + FN STIG++F +++ + K +K QIWDTAGQER+ IT++YYRGA+G +LVYD+T +F+N+ +WLR + EH + ++ ML+GNK D+ V G+ A + ++ F ETSA N+E AF LT I+ K V+ Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAF---LTLAEDILQKTPVK 177
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RHA1_ARATH (Ras-related protein RHA1 OS=Arabidopsis thaliana GN=RHA1 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.909e-39 Identity = 78/182 (42.86%), Postives = 121/182 (66.48%), Query Frame = 3 Query: 120 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPS 665 KLVL+GD G GKS+L+ RF K++F +STIG F +++L +++ VK +IWDTAGQERY ++ YYRGA A++V+D+T A+F+ +W++EL+ +PN+++ L GNK DL VS E+ + +A++ SL+FMETSA ATNV++ F E+ ++ + V+ N T LP+ Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIAKRLPR------VQPAENPTGMVLPN 187
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.909e-39 Identity = 74/165 (44.85%), Postives = 111/165 (67.27%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 599 YD+LFKL+LIGDSGVGK+ L+ RF ++ FN STIG++F R++ I+ K +K Q+WDTAGQER++ IT+AYYRGA+G +LVYD+T +F+N+ W++ ++E+ + +L+GNK D+ V E A + + F ETSA + NV+ AF+ + I Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.909e-39 Identity = 74/165 (44.85%), Postives = 111/165 (67.27%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 599 YD+LFKL+LIGDSGVGK+ L+ RF ++ FN STIG++F R++ I+ K +K Q+WDTAGQER++ IT+AYYRGA+G +LVYD+T +F+N+ W++ ++E+ + +L+GNK D+ V E A + + F ETSA + NV+ AF+ + I Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: SEC4_YEAST (Ras-related protein SEC4 OS=Saccharomyces cerevisiae GN=SEC4 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.033e-38 Identity = 83/209 (39.71%), Postives = 128/209 (61.24%), Query Frame = 3 Query: 99 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 725 + YD + K++LIGDSGVGKS LL RF +++FN +TIG++F +++ I+ K VK Q+WDTAGQER+R IT+AYYRGA+G +LVYDVT TF N+ +W + + EH + ++L+GNK+D+ V V+ + G+A A++ + F+E+SA + NV F + I + + + NG K I++ S + CC Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRV-VTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNG-------KEGNISINSGSGNSSKSNCC 215
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: SEC4_CANGA (Ras-related protein SEC4 OS=Candida glabrata GN=SEC4 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.033e-38 Identity = 83/196 (42.35%), Postives = 128/196 (65.31%), Query Frame = 3 Query: 99 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV---EAGSNGTASTLPSKGET 677 + YD + K++LIGDSGVGKS LL RF +++FN +TIG++F +++ I+ K VK Q+WDTAGQER+R IT+AYYRGA+G +LVYDVT TF N+ +W + + EH + ++L+GNK+D+ V V+ E G+A A++ L F+E+SA + NV F + I + + + +G +G S +KG++ Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFANIKQWFKTVNEHANDEAQLLLVGNKSDMDTRV-VTYEQGEALAKELGLPFIESSAKNDDNVNEIFFTLARLIQEKIDSNKLSGPNSGKDGNISINANKGDS 209
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB5C_PONAB (Ras-related protein Rab-5C OS=Pongo abelii GN=RAB5C PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.033e-38 Identity = 83/204 (40.69%), Postives = 123/204 (60.29%), Query Frame = 3 Query: 117 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 728 FKLVL+G+S VGKS+L+ RF K +F+ +STIG F T+++ +D+ VK +IWDTAGQERY ++ YYRGA A++VYD+T TF W++EL+ PNI++ L GNK DL AV ++ +A+A+ SL FMETSA A NV F + ++ K + A A P + +++++++ R CCS Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGA---------PGRNRGVDLQENNPA-SRSQCCS 215
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB5C_HUMAN (Ras-related protein Rab-5C OS=Homo sapiens GN=RAB5C PE=1 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 1.033e-38 Identity = 83/204 (40.69%), Postives = 123/204 (60.29%), Query Frame = 3 Query: 117 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 728 FKLVL+G+S VGKS+L+ RF K +F+ +STIG F T+++ +D+ VK +IWDTAGQERY ++ YYRGA A++VYD+T TF W++EL+ PNI++ L GNK DL AV ++ +A+A+ SL FMETSA A NV F + ++ K + A A P + +++++++ R CCS Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGA---------PGRNRGVDLQENNPA-SRSQCCS 215
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB5C_MOUSE (Ras-related protein Rab-5C OS=Mus musculus GN=Rab5c PE=1 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 1.349e-38 Identity = 84/204 (41.18%), Postives = 123/204 (60.29%), Query Frame = 3 Query: 117 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 728 FKLVL+G+S VGKS+L+ RF K +F+ +STIG F T+++ +D+ VK +IWDTAGQERY ++ YYRGA A++VYD+T TF W++EL+ PNI++ L GNK DL AV ++ +A+A+ SL FMETSA A NV F + ++ K + A A P + ++++ +S+ R CCS Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGA---------PGRTRGVDLQ-ESNPASRSQCCS 215 The following BLAST results are available for this feature:
BLAST of CX290269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290269 ID=CX290269; Name=CX290269; organism=Citrus clementina; type=EST; length=735bpback to top |