CX290269
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.349e-38 Identity = 74/165 (44.85%), Postives = 110/165 (66.67%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 599 YD+LFKL+LIGDSGVGK+ L+ RF ++ FN STIG++F R++ I+ K +K Q+WDTAGQER++ IT+AYYRGA+G +LVYD+T +F+N+ W++ ++E+ + +L+GNK D+ V E A + + F ETSA + NV+ AF + I Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDI 169
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB10_PONAB (Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.349e-38 Identity = 76/167 (45.51%), Postives = 110/167 (65.87%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 605 YD LFKL+LIGDSGVGK+ +L RF+ + FN STIG++F +++ + K +K QIWDTAGQER+ IT++YYRGA+G +LVYD+T +F+N+ +WLR + EH + ++ ML+GNK D+ V G+ A + + F ETSA N+E AF + I + Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB10_MOUSE (Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.349e-38 Identity = 76/167 (45.51%), Postives = 110/167 (65.87%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 605 YD LFKL+LIGDSGVGK+ +L RF+ + FN STIG++F +++ + K +K QIWDTAGQER+ IT++YYRGA+G +LVYD+T +F+N+ +WLR + EH + ++ ML+GNK D+ V G+ A + + F ETSA N+E AF + I + Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB10_HUMAN (Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.349e-38 Identity = 76/167 (45.51%), Postives = 110/167 (65.87%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 605 YD LFKL+LIGDSGVGK+ +L RF+ + FN STIG++F +++ + K +K QIWDTAGQER+ IT++YYRGA+G +LVYD+T +F+N+ +WLR + EH + ++ ML+GNK D+ V G+ A + + F ETSA N+E AF + I + Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB5C_CHICK (Ras-related protein Rab-5C OS=Gallus gallus GN=RAB5C PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.762e-38 Identity = 86/204 (42.16%), Postives = 122/204 (59.80%), Query Frame = 3 Query: 117 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 728 FKLVL+G+S VGKS+L+ RF K +F+ +STIG F T+++ +D+ VK +IWDTAGQERY ++ YYRGA A++VYD+T TF W++EL+ PNI++ L GNK DL AV +D + +A+ SL FMETSA A NV E+ I K + K + G P + ++++ +SS R CCS Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKADLATKRAVDFQDAQTYADDNSLLFMETSAKTAMNV----NEIFMAIAKKLPKNEPQNAPGG-----PGRNRVVDLQ-ESSQPSRSQCCS 215
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB35_RAT (Ras-related protein Rab-35 OS=Rattus norvegicus GN=Rab35 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.762e-38 Identity = 85/171 (49.71%), Postives = 113/171 (66.08%), Query Frame = 3 Query: 102 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVE---NAFTEVLTQIYK 605 +YD+LFKL++IGDSGVGKS+LL RF N F+ +TIGV+F R++ I+ + VK QIWDTAGQER+R ITS YYRG G ++VYDVT +F NV RWL E+ ++ D ++ +L+GNK D V TED FA Q + ETSA + NVE N TE++ + K Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKK 173
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB35_MOUSE (Ras-related protein Rab-35 OS=Mus musculus GN=Rab35 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.762e-38 Identity = 85/171 (49.71%), Postives = 113/171 (66.08%), Query Frame = 3 Query: 102 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVE---NAFTEVLTQIYK 605 +YD+LFKL++IGDSGVGKS+LL RF N F+ +TIGV+F R++ I+ + VK QIWDTAGQER+R ITS YYRG G ++VYDVT +F NV RWL E+ ++ D ++ +L+GNK D V TED FA Q + ETSA + NVE N TE++ + K Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKK 173
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB35_HUMAN (Ras-related protein Rab-35 OS=Homo sapiens GN=RAB35 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.762e-38 Identity = 85/171 (49.71%), Postives = 113/171 (66.08%), Query Frame = 3 Query: 102 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVE---NAFTEVLTQIYK 605 +YD+LFKL++IGDSGVGKS+LL RF N F+ +TIGV+F R++ I+ + VK QIWDTAGQER+R ITS YYRG G ++VYDVT +F NV RWL E+ ++ D ++ +L+GNK D V TED FA Q + ETSA + NVE N TE++ + K Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKK 173
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB10_CANFA (Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.762e-38 Identity = 76/167 (45.51%), Postives = 110/167 (65.87%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 605 YD LFKL+LIGDSGVGK+ +L RF+ + FN STIG++F +++ + K +K QIWDTAGQER+ IT++YYRGA+G +LVYD+T +F+N+ +WLR + EH + ++ ML+GNK D+ V G+ A + + F ETSA N+E AF + I + Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILR 172
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB4A_MOUSE (Ras-related protein Rab-4A OS=Mus musculus GN=Rab4a PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.301e-38 Identity = 78/167 (46.71%), Postives = 110/167 (65.87%), Query Frame = 3 Query: 99 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 599 E YD+LFK ++IG++G GKS LL +F + +F +S TIG+EF ++ + + K VK QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ + WL + R NI+++L GNK DL V+ + FA++ L F+ETSAL NVE AF + +I Sbjct: 3 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGMEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVLILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKI 169 The following BLAST results are available for this feature:
BLAST of CX290269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290269 ID=CX290269; Name=CX290269; organism=Citrus clementina; type=EST; length=735bpback to top |