CX290269
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.005e-38 Identity = 75/167 (44.91%), Postives = 109/167 (65.27%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 605 YD LFKL+LIGDSGVGK+ +L RF+ + FN STIG++ +++ + K +K QIWDTAGQER+ IT++YYRGA+G +LVYD+T +F+N+ +WLR + EH + ++ ML+GNK D+ V G+ A + + F ETSA N+E AF + I + Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB19_MOUSE (Ras-related protein Rab-19 OS=Mus musculus GN=Rab19 PE=2 SV=3) HSP 1 Score: 157.918 bits (398), Expect = 5.126e-38 Identity = 76/162 (46.91%), Postives = 109/162 (67.28%), Query Frame = 3 Query: 96 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLY-FMETSALDATNVENAF 578 DE DYLFK++LIGDS VGK+ ++ F ++ ++TIGV+F RSL ID K VK Q+WDTAGQER+R IT +YYR A A++ YD+TR +TF++V W+ E+ ++ N+++MLIGNK+DL V ED AE+ L +ETSA ++ N++ F Sbjct: 11 DENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVLFEDACTLAEKHGLLAVLETSAKESRNIDEVF 172
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB19_HUMAN (Ras-related protein Rab-19 OS=Homo sapiens GN=RAB19 PE=2 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 5.126e-38 Identity = 76/162 (46.91%), Postives = 108/162 (66.67%), Query Frame = 3 Query: 96 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLY-FMETSALDATNVENAF 578 DE +DYLFK++LIGDS VGK+ ++ F + ++TIGV+F RSL ID K VK Q+WDTAGQER+R IT +YYR A A++ YD+TR +TF+++ W+ E+ ++ N+++MLIGNK DL V ED AE+ L +ETSA ++ N+E F Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVF 172
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RB39B_MOUSE (Ras-related protein Rab-39B OS=Mus musculus GN=Rab39b PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.695e-38 Identity = 83/185 (44.86%), Postives = 119/185 (64.32%), Query Frame = 3 Query: 111 YLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRID-NKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDP-NIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR--AVEAGSNGTAS 653 Y F+L++IGDS VGKS L+ RFT+ F S T+GV+F +R + I+ K +K QIWDTAGQER+R+IT AYYR +VG LL++D+T +FQNV WL E + H P I+ +L+G+K DL V+ + + A + ++ETSA DA NVE AFT++ IY++V + ++ G G S Sbjct: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEITIQEGWEGVKS 191
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RB39B_HUMAN (Ras-related protein Rab-39B OS=Homo sapiens GN=RAB39B PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.695e-38 Identity = 83/185 (44.86%), Postives = 119/185 (64.32%), Query Frame = 3 Query: 111 YLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRID-NKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDP-NIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR--AVEAGSNGTAS 653 Y F+L++IGDS VGKS L+ RFT+ F S T+GV+F +R + I+ K +K QIWDTAGQER+R+IT AYYR +VG LL++D+T +FQNV WL E + H P I+ +L+G+K DL V+ + + A + ++ETSA DA NVE AFT++ IY++V + ++ G G S Sbjct: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEITIQEGWEGVKS 191
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RB39B_BOVIN (Ras-related protein Rab-39B OS=Bos taurus GN=RAB39B PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.695e-38 Identity = 83/185 (44.86%), Postives = 119/185 (64.32%), Query Frame = 3 Query: 111 YLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRID-NKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDP-NIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR--AVEAGSNGTAS 653 Y F+L++IGDS VGKS L+ RFT+ F S T+GV+F +R + I+ K +K QIWDTAGQER+R+IT AYYR +VG LL++D+T +FQNV WL E + H P I+ +L+G+K DL V+ + + A + ++ETSA DA NVE AFT++ IY++V + ++ G G S Sbjct: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGDITIQEGWEGVKS 191
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RABQ_DICDI (Ras-related protein RabQ OS=Dictyostelium discoideum GN=rabQ PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.695e-38 Identity = 81/193 (41.97%), Postives = 122/193 (63.21%), Query Frame = 3 Query: 108 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINV 686 +Y K ++ G VGKS+LL +F + EF+ E +TIGVEF TRS+ ID+ +K +IWDTAGQE +R+IT+ YYRGA ALL YD+T+ +FQ + W+ E+R+ + PNI++ LIGNK D + ++TE+G A++ + F ETSA D +VE+ F VSK+ + GT + + K ++I + Sbjct: 3 EYHLKCIVTGPPFVGKSSLLLQFCEKEFSFEMDTTIGVEFQTRSILIDSSKIKLEIWDTAGQESFRSITTNYYRGAHIALLCYDITKRQSFQYLSGWMDEVRQMSSPNIVIALIGNKCDCKDKRVITTEEGAKNAKENDILFFETSAKDYESVESVFDG--------VSKKVLSLIKQGTLTVVNKKPQSIQL 187
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB5B_PONAB (Ras-related protein Rab-5B OS=Pongo abelii GN=RAB5B PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.695e-38 Identity = 76/163 (46.63%), Postives = 108/163 (66.26%), Query Frame = 3 Query: 117 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 605 FKLVL+G+S VGKS+L+ RF K +F+ +STIG F T+S+ +D+ VK +IWDTAGQERY ++ YYRGA A++VYD+T TF W++EL+ P+I++ L GNK DL + V E+ +A+A+ SL FMETSA A NV + F + ++ K Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPK 183
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB5B_MOUSE (Ras-related protein Rab-5B OS=Mus musculus GN=Rab5b PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.695e-38 Identity = 76/163 (46.63%), Postives = 108/163 (66.26%), Query Frame = 3 Query: 117 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 605 FKLVL+G+S VGKS+L+ RF K +F+ +STIG F T+S+ +D+ VK +IWDTAGQERY ++ YYRGA A++VYD+T TF W++EL+ P+I++ L GNK DL + V E+ +A+A+ SL FMETSA A NV + F + ++ K Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPK 183
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB5B_HUMAN (Ras-related protein Rab-5B OS=Homo sapiens GN=RAB5B PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.695e-38 Identity = 76/163 (46.63%), Postives = 108/163 (66.26%), Query Frame = 3 Query: 117 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 605 FKLVL+G+S VGKS+L+ RF K +F+ +STIG F T+S+ +D+ VK +IWDTAGQERY ++ YYRGA A++VYD+T TF W++EL+ P+I++ L GNK DL + V E+ +A+A+ SL FMETSA A NV + F + ++ K Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPK 183 The following BLAST results are available for this feature:
BLAST of CX290269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290269 ID=CX290269; Name=CX290269; organism=Citrus clementina; type=EST; length=735bpback to top |