CX290269
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB5A_CANFA (Ras-related protein Rab-5A OS=Canis familiaris GN=RAB5A PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.668e-37 Identity = 73/163 (44.79%), Postives = 108/163 (66.26%), Query Frame = 3 Query: 117 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 605 FKLVL+G+S VGKS+L+ RF K +F+ +STIG F T+++ +D+ VK +IWDTAGQERY ++ YYRGA A++VYD+T +F W++EL+ PNI++ L GNK DL + AV ++ +++A+ SL FMETSA + NV F + ++ K Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 183
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB26_HUMAN (Ras-related protein Rab-26 OS=Homo sapiens GN=RAB26 PE=1 SV=3) HSP 1 Score: 154.451 bits (389), Expect = 5.668e-37 Identity = 78/166 (46.99%), Postives = 108/166 (65.06%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESK-STIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 599 YD FK++L+GDSGVGK+ LL RF F + ST+G++F + L +D VK Q+WDTAGQER+R++T AYYR A LL+YDVT A+F N+ WL E+ E+ ++ +ML+GNK D H V EDG+ A++ L FMETSA NV+ AFT + ++ Sbjct: 60 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 225
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB4A_ECHMU (Probable Ras-related protein Rab-4A OS=Echinococcus multilocularis PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.402e-37 Identity = 73/162 (45.06%), Postives = 108/162 (66.67%), Query Frame = 3 Query: 99 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTE-DGKAFAEQESLYFMETSALDATNVENAFT 581 + +DYLFK ++IG++G GK+ +L R+T+ +F ++ TIG EF +R + +D VK QIWDTAGQER+R++ +YY AVG LLVYD+T +F V +WL + R P ++V+L+GNK DLR T + FA++ L F+ETSAL N+++AFT Sbjct: 4 DRFDYLFKFLIIGNAGTGKTCILRRYTERKFFPNTQHTIGAEFGSRVISVDGTHVKIQIWDTAGQERFRSMARSYYHDAVGTLLVYDITNRTSFGAVEQWLGDARHLATPGVVVILVGNKKDLRDTDGQVTHWEANTFAQENGLQFIETSALTGENIDDAFT 165
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 1.263e-36 Identity = 78/176 (44.32%), Postives = 112/176 (63.64%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESK-STIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 629 YD FK++L+GDSGVGK+ LL RF F + ST+G++F + L +D VK QIWDTAGQER+R++T AYYR A LL+YD+T +F N+ WL E++E+ ++++ML+GNK D V EDG+ A++ L FMETSA NV+ AFT + ++ + +K E Sbjct: 61 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIAKELKQRSTKAPSE 236
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RHN1_NICPL (Ras-related protein RHN1 OS=Nicotiana plumbaginifolia GN=RHN1 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.649e-36 Identity = 72/160 (45.00%), Postives = 106/160 (66.25%), Query Frame = 3 Query: 120 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 599 KLVL+GD G GKS+L+ RF K +F +STIG F + +L ++N VK +IWDTAGQERY ++ YYRGA A++VYD+T +F +W++EL++ +PN+++ L GNK DL V+ E+ + +AE+ L+FMETSA A NV F E+ ++ Sbjct: 12 KLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAVNNATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMALAGNKADLEDRRKVTAEEARLYAEENGLFFMETSAKTAVNVNAIFYEIAKRL 171
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RB22A_HUMAN (Ras-related protein Rab-22A OS=Homo sapiens GN=RAB22A PE=1 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.649e-36 Identity = 79/202 (39.11%), Postives = 119/202 (58.91%), Query Frame = 3 Query: 120 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 725 K+ L+GD+GVGKS+++ RF ++ F+ TIG F T++++ N++ K IWDTAGQER+RA+ YYRG+ A++VYD+T+ TF + W++ELR+H PNI+V + GNK DL + V D K +A+ F+ETSA +A N+ F E+ +I T + LPS G+ ++ S KR CC Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI-------------PSTDANLPSGGKGFKLRRQPSEPKR-SCC 194
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RABA_DICDI (Ras-related protein RabA OS=Dictyostelium discoideum GN=rabA PE=2 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.649e-36 Identity = 76/186 (40.86%), Postives = 119/186 (63.98%), Query Frame = 3 Query: 99 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTAST 656 ++Y++LFK + +GDSGVGKS++L RFT++ F STIGV+F +++ I+ K +K QIWDTAGQER+R ++ YRG ++VYDVT +F+NV +W++E+ + N+I M+IGNK+D+ V + FA+ + F ETSA A N+E+AF ++ K+ R E + T+S+ Sbjct: 3 KKYEHLFKFIFVGDSGVGKSSILLRFTEDTFTESYISTIGVDFKIKTVYIEGKAIKLQIWDTAGQERFRVHNNSQYRGCHAVMVVYDVTDQRSFENVAKWIQEIERYARDNVIKMIIGNKSDMISQKVVDPFLAQEFADSLDITFKETSAKQAINIEDAFISLV----KLCIDRIEEFKPSSTSSS 184
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB26_BOVIN (Ras-related protein Rab-26 OS=Bos taurus GN=RAB26 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.649e-36 Identity = 77/166 (46.39%), Postives = 108/166 (65.06%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESK-STIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 599 YD FK++L+GDSGVGK+ LL RF F + ST+G++F + + +D VK QIWDTAGQER+R++T AYYR A LL+YDVT A+F ++ WL E++EH ++++ML+GNK D AV ED + A+ L FMETSA NV+ AFT + ++ Sbjct: 60 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVVDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVDSAQERAVKREDAEKLAKDYGLPFMETSAKTGLNVDLAFTAIAKEL 225
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB5_TOBAC (Ras-related protein Rab5 OS=Nicotiana tabacum GN=RAB5 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.154e-36 Identity = 71/160 (44.38%), Postives = 107/160 (66.88%), Query Frame = 3 Query: 120 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 599 KLVL+GD G GKS+L+ RF K +F +STIG F + ++ ++N VK +IWDTAGQERY ++ YYRGA A++VYD+T + +W++EL++ +PN+++ L GNK DL V+ E+ + +AE+ L+FMETSA ATNV + F E+ ++ Sbjct: 12 KLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESLARAKKWVQELQKQGNPNMVMALAGNKADLEDKRKVTAEEARLYAEENGLFFMETSAKTATNVNDIFYEIAKRL 171
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.154e-36 Identity = 78/176 (44.32%), Postives = 112/176 (63.64%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESK-STIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 629 YD FK++L+GDSGVGK+ LL RF F + ST+G++F + L +D VK QIWDTAGQER+R++T AYYR A LL+YD+T +F N+ WL E++E+ ++++ML+GNK D V EDG+ A++ L FMETSA NV+ AFT + ++ + +K E Sbjct: 64 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQDRVVKREDGEKLAKEYGLPFMETSARTGLNVDLAFTAIAKELKQRSAKAPSE 239 The following BLAST results are available for this feature:
BLAST of CX290269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290269 ID=CX290269; Name=CX290269; organism=Citrus clementina; type=EST; length=735bpback to top |