CX290269
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB25_BOVIN (Ras-related protein Rab-25 OS=Bos taurus GN=RAB25 PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.460e-58 Identity = 108/179 (60.34%), Postives = 144/179 (80.45%), Query Frame = 3 Query: 84 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 620 G + +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + +KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VML+GNK+DL V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+ Sbjct: 2 GNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB25_HUMAN (Ras-related protein Rab-25 OS=Homo sapiens GN=RAB25 PE=1 SV=2) HSP 1 Score: 223.787 bits (569), Expect = 7.607e-58 Identity = 109/179 (60.89%), Postives = 143/179 (79.89%), Query Frame = 3 Query: 84 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 620 G +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VML+GNK+DL V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+ Sbjct: 2 GNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB25_RABIT (Ras-related protein Rab-25 OS=Oryctolagus cuniculus GN=RAB25 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 9.935e-58 Identity = 109/179 (60.89%), Postives = 143/179 (79.89%), Query Frame = 3 Query: 84 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 620 G +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VML+GNK+DL V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+ Sbjct: 2 GNGKEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RB11C_DICDI (Ras-related protein Rab-11C OS=Dictyostelium discoideum GN=rab11C PE=1 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.891e-57 Identity = 108/221 (48.87%), Postives = 154/221 (69.68%), Query Frame = 3 Query: 96 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVL-----------KRIGCC 725 +EE +YLFK+V+IGDS VGKSNLL+RFT+NEF ++K+TIGV+F T+S+ IDNK + AQ WDTAGQER+RA+TS YYRGAVGA++VYD+T +F+NV RWL ELRE + +I++M++GNK+DL V T++ +AFAE + F+ETSAL++TNV +F +LT IY +VS + + +P++G+ + D + K+ GCC Sbjct: 4 EEEAEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNKSDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSFERLLTDIYHLVSSKKPMVVDDTQNWLVPNQGKKLTPLSDPAPQLTANTTSTHQEKKSGCC 224
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RB11B_DICDI (Ras-related protein Rab-11B OS=Dictyostelium discoideum GN=rab11B PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 6.237e-52 Identity = 97/184 (52.72%), Postives = 138/184 (75.00%), Query Frame = 3 Query: 102 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR---AVEAGSNG 644 EYDYL K+V+IGDSGVGKSNLLSR+ KNEF++ STIGVEF+T++L+IDNK++K Q+WDTAGQE+Y +IT +YY+GA+GAL+VY++ +F N+ +WL++ RE+ + +ML+GNK+DL+ VST +GK FAE+ + F+ETSALD+ NVE AF + IY + K ++ +NG Sbjct: 7 EYDYLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWDTAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFRENAHQDYGIMLVGNKSDLKEYREVSTLEGKQFAEKHYMQFIETSALDSNNVETAFNNLFNFIYYSLFKNKTMTLDINNNG 190
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.218e-49 Identity = 100/203 (49.26%), Postives = 129/203 (63.55%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS-------------KRAVEAGSNGTASTLPSKGE 674 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H +PN+ +MLIGNK DL H AV+TE+G+ FA++ L F+ETSA A NVE AF +IYK + K AG+ G + P +G+ Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYGIKVGYGAGNAGPQAAKPGEGD 205
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.942e-49 Identity = 94/167 (56.29%), Postives = 118/167 (70.66%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 605 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H +PN+ +MLIGNK DL H AV+TE+G+ FA++ L F+ETSA A NVE AF +IYK Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYK 169
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.184e-48 Identity = 102/210 (48.57%), Postives = 130/210 (61.90%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG--SNGTASTLPSKGETINVKDDSSVLKRIGCCS 728 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H + N+ +ML+GNK DL H AVS E+G+ FA++ L FME SA A NVE AF + IYK + + S G G++ SS + GCCS Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSNESYGIKVGYAIPGQSGGAGSSSS--QGGGCCS 210
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 5.464e-48 Identity = 99/216 (45.83%), Postives = 133/216 (61.57%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK---------RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 725 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H+ N+++MLIGNK+DL V E+G+AFA + L FMETSA A NVE AF +IY+ + + ++ G + ST S G + + ++ + GCC Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANGIKIGPQQSIST--SVGPSASQRNSRDIGSNSGCC 216
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 190.66 bits (483), Expect = 7.137e-48 Identity = 102/210 (48.57%), Postives = 137/210 (65.24%), Query Frame = 3 Query: 102 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCST 731 EYDYLFKL+LIGDSGVGKS LL RF+ + + STIGV+F R++ D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL E+ + N+ +L+GNK+DL A+ E KAFA++ + FMETSA DATNVE AF + I + ++ + AG+N T+ +G+ + K+ GCCST Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQ--PAGNNARPPTVQIRGQPVAQKN--------GCCST 203 The following BLAST results are available for this feature:
BLAST of CX290269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290269 ID=CX290269; Name=CX290269; organism=Citrus clementina; type=EST; length=735bpback to top |