CX290269
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAN_CHICK (GTP-binding nuclear protein Ran OS=Gallus gallus GN=RAN PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.961e-19 Identity = 55/156 (35.26%), Postives = 84/156 (53.85%), Query Frame = 3 Query: 117 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL--RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAF 578 FKLVL+GD G GK+ + R EF + +T+GVE + +K +WDTAGQE++ + YY A A++++DVT T++NV W R+L + NI ++L GNK D+ R + A S F +++L + + SA N E F Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-NIPIVLCGNKVDIKDRKVKAKSI----VFHRKKNLQYYDISAKSNYNFEKPF 161
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAN_CANFA (GTP-binding nuclear protein Ran OS=Canis familiaris GN=RAN PE=1 SV=3) HSP 1 Score: 94.3597 bits (233), Expect = 6.961e-19 Identity = 55/156 (35.26%), Postives = 84/156 (53.85%), Query Frame = 3 Query: 117 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL--RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAF 578 FKLVL+GD G GK+ + R EF + +T+GVE + +K +WDTAGQE++ + YY A A++++DVT T++NV W R+L + NI ++L GNK D+ R + A S F +++L + + SA N E F Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-NIPIVLCGNKVDIKDRKVKAKSI----VFHRKKNLQYYDISAKSNYNFEKPF 161
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAN_BOVIN (GTP-binding nuclear protein Ran OS=Bos taurus GN=RAN PE=2 SV=3) HSP 1 Score: 94.3597 bits (233), Expect = 6.961e-19 Identity = 55/156 (35.26%), Postives = 84/156 (53.85%), Query Frame = 3 Query: 117 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL--RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAF 578 FKLVL+GD G GK+ + R EF + +T+GVE + +K +WDTAGQE++ + YY A A++++DVT T++NV W R+L + NI ++L GNK D+ R + A S F +++L + + SA N E F Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-NIPIVLCGNKVDIKDRKVKAKSI----VFHRKKNLQYYDISAKSNYNFEKPF 161
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RALB_PONAB (Ras-related protein Ral-B OS=Pongo abelii GN=RALB PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.961e-19 Identity = 57/187 (30.48%), Postives = 98/187 (52.41%), Query Frame = 3 Query: 114 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELR--EHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSK 668 L K++++G GVGKS L +F +EF +E + + + +D + V+ I DTAGQE Y AI Y+R G LLV+ +T H +F + ++ + + I ++++GNK+DL V E+ ++ AE+ + ++ETSA NV+ F +++ +I K + NG S+ K Sbjct: 14 LHKVIMVGSGGVGKSALTLQFMYDEF-VEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEERRQVPVEEARSKAEEWGVQYVETSAKTRANVDKVFFDLMREIR--TKKMSENKDKNGKKSSKNKK 197
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RALB_HUMAN (Ras-related protein Ral-B OS=Homo sapiens GN=RALB PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.961e-19 Identity = 57/187 (30.48%), Postives = 98/187 (52.41%), Query Frame = 3 Query: 114 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELR--EHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSK 668 L K++++G GVGKS L +F +EF +E + + + +D + V+ I DTAGQE Y AI Y+R G LLV+ +T H +F + ++ + + I ++++GNK+DL V E+ ++ AE+ + ++ETSA NV+ F +++ +I K + NG S+ K Sbjct: 14 LHKVIMVGSGGVGKSALTLQFMYDEF-VEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEERRQVPVEEARSKAEEWGVQYVETSAKTRANVDKVFFDLMREIR--TKKMSENKDKNGKKSSKNKK 197
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB28_RAT (Ras-related protein Rab-28 OS=Rattus norvegicus GN=Rab28 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.961e-19 Identity = 55/180 (30.56%), Postives = 91/180 (50.56%), Query Frame = 3 Query: 96 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV-VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRW---LRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 623 +E D K+V++GD GK++L + F + F + K TIG++F R + + + V Q+WD GQ + Y GA G LLVYD+T + +F+N+ W ++ + E ++ +V L+GNK DL H+ V + F ++ SA +V F +V +I I +A Sbjct: 6 EESQDRQLKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQTIGGKMLDKYIYGAQGILLVYDITNYQSFENLEDWYSVVKTVSEESETQPLVALVGNKIDLEHMRTVKPDKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGIKLNKA 185
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RALBA_XENLA (Ras-related protein ralB-A OS=Xenopus laevis GN=ralb-A PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.091e-19 Identity = 57/188 (30.32%), Postives = 97/188 (51.60%), Query Frame = 3 Query: 114 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELR--EHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKG 671 L K++++G GVGKS L +F +EF +E + + + +D + V+ I DTAGQE Y AI Y+R G LLV+ +T H +F + ++ + + I ++++GNK+DL V ++ + AE+ + ++ETSA NV+ F +++ +I K + NG S KG Sbjct: 14 LHKVIMVGSGGVGKSALTLQFMYDEF-VEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLIVGNKSDLEDRRQVPMDEARGKAEEWGVQYVETSAKTRANVDKVFFDLMREIR--TKKMSENKDKNGKKSGKSKKG 198
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB7B_HUMAN (Ras-related protein Rab-7b OS=Homo sapiens GN=RAB7B PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.091e-19 Identity = 50/156 (32.05%), Postives = 90/156 (57.69%), Query Frame = 3 Query: 120 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDP---NIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAF 578 KL+++G GVGK++LL ++ F E ++T+G ++ + + + +K QIWDT GQER+R++ S +Y+G+ G +L +DVT +F+ + W ++ P + ++L+GNK DL V E + + ++ + + E SA + NV AF Sbjct: 10 KLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQSYPMVLLGNKIDLADR-KVPQEVAQGWCREKDIPYFEVSAKNDINVVQAF 164
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB24_HUMAN (Ras-related protein Rab-24 OS=Homo sapiens GN=RAB24 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.091e-19 Identity = 53/161 (32.92%), Postives = 89/161 (55.28%), Query Frame = 3 Query: 120 KLVLIGDSGVGKSNLLSRFTKNEFNLES-KSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL----RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEV 587 K+V++G VGK++L+ R+ + F + ++TIG F + + + ++ V IWDTAG ERY A++ YYRGA A++ YD+T ++F+ W++ELR + + L G K+DL R V D + +A+ ETS+ +V+ F +V Sbjct: 9 KVVMLGKEYVGKTSLVERYVHDRFLVGPYQNTIGAAFVAKVMSVGDRTVTLGIWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKELRS-LEEGCQIYLCGTKSDLLEEDRRRRRVDFHDVQDYADNIKAQLFETSSKTGQSVDELFQKV 168
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAS_CRYNE (Ras-like protein OS=Cryptococcus neoformans GN=RAS1 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.187e-18 Identity = 64/204 (31.37%), Postives = 101/204 (49.51%), Query Frame = 3 Query: 117 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII-VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 725 +KLV++G GVGKS L +F ++ F E TI + + + ID +V + DTAGQE Y A+ Y R G LLVY +T ++F+ V + +++ D + V+++ NK DL + V +G+ A++ + +ETSA NV+ AF V+ I + + N A + S + D V K GCC Sbjct: 10 YKLVVVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCI-IDEEVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRSSFEEVSTFHQQILRVKDKDYFPVVVVANKCDLEYERQVQPHEGRDLAKRFNAQCIETSAKQRVNVDEAFIAVVRAIRRYQKESGPPQAVNAPAKSQMSAVGGRAAEKDDHVDK--GCC 210 The following BLAST results are available for this feature:
BLAST of CX290269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290269 ID=CX290269; Name=CX290269; organism=Citrus clementina; type=EST; length=735bpback to top |