CX290269
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RIT2_HUMAN (GTP-binding protein Rit2 OS=Homo sapiens GN=RIT2 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.005e-17 Identity = 57/165 (34.55%), Postives = 92/165 (55.76%), Query Frame = 3 Query: 117 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELRE--HTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 605 +K+V++G GVGKS + +F ++F TI + T+ +RIDN+ I DTAGQ + A+ Y RG G ++ Y VT +FQ ++ + + HT I ++L+GNK DL VSTE+G + A++ + F ETSA +++AF ++ +I K Sbjct: 21 YKVVMLGAGGVGKSAMTMQFISHQFPDYHDPTIEDAYKTQ-VRIDNEPAYLDILDTAGQAEFTAMREQYMRGGEGFIICYSVTDRQSFQEAAKFKELIFQVRHT-YEIPLVLVGNKIDLEQFRQVSTEEGLSLAQEYNCGFFETSAALRFCIDDAFHGLVREIRK 183
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAP2A_PONAB (Ras-related protein Rap-2a OS=Pongo abelii GN=RAP2A PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.005e-17 Identity = 54/163 (33.13%), Postives = 91/163 (55.83%), Query Frame = 3 Query: 117 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRE--LREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 599 +K+V++G GVGKS L +F F + TI +F + + +D+ +I DTAG E++ ++ Y + G +LVY + +FQ++ + +R+ +R + V+L+GNK DL VS+ +G+A AE+ FMETSA T V+ F E++ Q+ Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDI-KPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSNEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQM 164
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAP2A_MOUSE (Ras-related protein Rap-2a OS=Mus musculus GN=Rap2a PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.005e-17 Identity = 54/163 (33.13%), Postives = 91/163 (55.83%), Query Frame = 3 Query: 117 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRE--LREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 599 +K+V++G GVGKS L +F F + TI +F + + +D+ +I DTAG E++ ++ Y + G +LVY + +FQ++ + +R+ +R + V+L+GNK DL VS+ +G+A AE+ FMETSA T V+ F E++ Q+ Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDI-KPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSNEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQM 164
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAP2A_HUMAN (Ras-related protein Rap-2a OS=Homo sapiens GN=RAP2A PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.005e-17 Identity = 54/163 (33.13%), Postives = 91/163 (55.83%), Query Frame = 3 Query: 117 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRE--LREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 599 +K+V++G GVGKS L +F F + TI +F + + +D+ +I DTAG E++ ++ Y + G +LVY + +FQ++ + +R+ +R + V+L+GNK DL VS+ +G+A AE+ FMETSA T V+ F E++ Q+ Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDI-KPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQM 164
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSJ (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica GN=RAN1 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.005e-17 Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = 3 Query: 117 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAF 578 FKLV++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT T++NV W R+L + NI ++L GNK D+++ + + F +++L + E SA N E F Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEVSAKSNYNFEKPF 164
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSI (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica GN=RAN1 PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.005e-17 Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = 3 Query: 117 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAF 578 FKLV++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT T++NV W R+L + NI ++L GNK D+++ + + F +++L + E SA N E F Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEVSAKSNYNFEKPF 164
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: DJ27B_XENLA (DnaJ homolog subfamily C member 27-B OS=Xenopus laevis GN=dnajc27-B PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.005e-17 Identity = 55/218 (25.23%), Postives = 104/218 (47.71%), Query Frame = 3 Query: 90 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDP--------NIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIV---SKRAVEAGSNG-TASTLPSKGETINVKDDSSVL 707 + D K++ +G++ VGKS ++ R+ + F + ++TIG+++ ++I ++ +K I+D AG + + + +Y+ G +LVYDV + +F+++ WL E+++ P NI+ + NK D V +G+ ++E + + ETSA + F + I + KR V A + G T S N KD +L Sbjct: 8 RKDSRKPLRIKVISMGNAEVGKSCIIKRYCEKRFVPKYQATIGIDYGVTKVQIKDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKESFESLDAWLAEMKQELGPQINIDNLDNIVFAVCANKIDSTKHRCVDESEGRLWSESKGFLYFETSAQSGEGINEMFQAFYSSIVDLCDNGGKRPVSAINIGFTKEQADSIRRIRNSKDSWDML 225
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAS_SCHPO (Ras-like protein 1 OS=Schizosaccharomyces pombe GN=ras1 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.313e-17 Identity = 66/212 (31.13%), Postives = 103/212 (48.58%), Query Frame = 3 Query: 117 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII-VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK--------IVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 725 +KLV++GD GVGKS L + ++ F E TI + + ID + + DTAGQE Y A+ Y R G LLVY++T ++F + + +++ D + V+L+ NK DL VS +G+ A+ ++ETSA NVE AF ++ I + +K+AV+ + AST N K + V + CC Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTIRRYNKSEEKGFQNKQAVQT-AQVPASTAKRASAVNNSKTEDEVSTK--CC 216
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RASX_DICDI (Ras-like protein rasX OS=Dictyostelium discoideum GN=rasX PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.313e-17 Identity = 57/172 (33.14%), Postives = 91/172 (52.91%), Query Frame = 3 Query: 78 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII-VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVL 590 M+GYK + L KL ++GD GVGK+ + +F N F TI + + + ID++V I DTAGQ+ A+ + R G +LVY VT ++F + + ++ D + + +M+IGNK+DL V+ ++GK A + FME SA +N+E F E + Sbjct: 1 MSGYKNNN----LVKLCIMGDGGVGKTAVTIQFISNHFVHYYDPTIEDSYRKQCV-IDDQVYMLDILDTAGQDELTAMRDQWIRSCEGFVLVYSVTSRSSFDQIAFFKEQINRVLDSDDVPIMMIGNKSDLDDERQVTYQEGKDLARCFGMSFMEVSAKTRSNIEEVFNETV 167
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAN_VICFA (GTP-binding nuclear protein Ran/TC4 OS=Vicia faba PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.313e-17 Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = 3 Query: 117 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAF 578 FKLV++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT T++NV W R+L + NI ++L GNK D+++ + + F +++L + E SA N E F Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 164 The following BLAST results are available for this feature:
BLAST of CX290269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290269 ID=CX290269; Name=CX290269; organism=Citrus clementina; type=EST; length=735bpback to top |