CX290269
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB2_LYMST (Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.346e-46 Identity = 91/167 (54.49%), Postives = 116/167 (69.46%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 605 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H++ N+++MLIGNK+DL V E+G+AFA + L FMETSA A NVE AF +IY+ Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQ 169
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB2A_RAT (Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.346e-46 Identity = 90/171 (52.63%), Postives = 119/171 (69.59%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 617 Y YLFK ++IGD+GVGKS LL +FT F T+GVEF R + ID K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H++ N+++MLIGNK+DL V E+G+AFA + L FMETSA A+NVE AF +IY+ + + Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQE 173
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: YPTM2_MAIZE (GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.758e-46 Identity = 98/210 (46.67%), Postives = 136/210 (64.76%), Query Frame = 3 Query: 102 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCST 731 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R++ D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL E+ + N+ +L+GNK+DL V+TE KAFA++ + FMETSA +ATNV+ AF + I ++ + A +N +T+ +G+ +N ++ CCS+ Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQ--PAAANARPATVQIRGQPVN--------QKTSCCSS 203
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.296e-46 Identity = 96/199 (48.24%), Postives = 130/199 (65.33%), Query Frame = 3 Query: 102 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDS 698 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R++ +D KV+K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL E+ + N+ +L+GNK+DL V KAFA++ + F+ETSA +ATNVE AF + +I ++ + + + G P +G+ IN K S Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIPTKAGGPV-VRPQEGKPINSKSSS 201
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: YPTV1_VOLCA (GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.998e-46 Identity = 97/199 (48.74%), Postives = 131/199 (65.83%), Query Frame = 3 Query: 102 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDS 698 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R++ +D KV+K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL E+ + N+ +L+GNK+DL V + KAFA++ + F+ETSA +ATNVE AF + +I ++ + V G P++G+ IN K S Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPVPPKPGGPV-VRPTEGKPINNKSSS 201
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 3.916e-46 Identity = 88/171 (51.46%), Postives = 121/171 (70.76%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 617 Y +LFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDTAGQE +R+IT +YYRG+ GALLVYD+TR TF ++ WL++ R + + N+ ++LIGNK+D+ AVS E+G+ FA++ L F+ETSA A+NVE AF ++IY+ + K Sbjct: 2 YSFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSDMESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKIYEKIQK 172
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: YPT1_YEAST (GTP-binding protein YPT1 OS=Saccharomyces cerevisiae GN=YPT1 PE=1 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 1.943e-45 Identity = 96/210 (45.71%), Postives = 136/210 (64.76%), Query Frame = 3 Query: 96 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 725 + EYDYLFKL+LIG+SGVGKS LL RF+ + + + STIGV+F +++ +D K VK QIWDTAGQER+R ITS+YYRG+ G ++VYDVT +F V WL+E+ + ++ +L+GNK DL+ V + K FA+ + F+ETSALD+TNVE+AF + QI + +S++ + N T KG +N+K S GCC Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNL----NETTQKKEDKG-NVNLKGQSLTNTGGGCC 206
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 1.943e-45 Identity = 101/209 (48.33%), Postives = 134/209 (64.11%), Query Frame = 3 Query: 102 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 728 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R++ D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL E+ + N+ +L+GNK DL VS E GKA A++ + F+ETSA DATNVE AF +T +I ++ A + +N SK T+ ++ V ++ CCS Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAF---MTMAGEIKNRMASQPATNA------SKPATVQMR-GQPVAQQSSCCS 202
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB1B_BOVIN (Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.943e-45 Identity = 99/210 (47.14%), Postives = 132/210 (62.86%), Query Frame = 3 Query: 102 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRI--GCC 725 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R++ +D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT ++ NV +WL+E+ + N+ +L+GNK+DL V K FA+ + F+ETSA +ATNVE AF + +I K + A S GE N+K DS+ +K+ GCC Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAA------------SGGERPNLKIDSTPVKQAGGGCC 201
BLAST of CX290269 vs. ExPASy Swiss-Prot
Match: RAB14_RAT (Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=2 SV=3) HSP 1 Score: 182.57 bits (462), Expect = 1.943e-45 Identity = 85/175 (48.57%), Postives = 121/175 (69.14%), Query Frame = 3 Query: 105 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 629 Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR + + + +K QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR +T+ ++ WL + R T+PN +++LIGNK DL V+ E+ K FAE+ L F+E SA NVE+AF E +IY+ + +++ Sbjct: 8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLD 182 The following BLAST results are available for this feature:
BLAST of CX290269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290269 ID=CX290269; Name=CX290269; organism=Citrus clementina; type=EST; length=735bpback to top |