CX292162
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292162 vs. ExPASy Swiss-Prot
Match: CH60_PECCC (60 kDa chaperonin (Fragment) OS=Pectobacterium carotovorum subsp. carotovorum GN=groL PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.212e-63 Identity = 128/245 (52.24%), Postives = 168/245 (68.57%), Query Frame = 3 Query: 3 NVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDXKISAIKDIIPLLEKTTQLRAPLLIIAXDVTGEALATLVVNKLRGILNVAAIKAPGF 734 NVVLD+ FG+P + DGV++AR IEL D EN GA +++EVASK ND+AGDGTTTA+VLA+ II GL +V +G NP+ LKRGIDK V VEEL+ + P I V TISA +D+ +G MIA+A+DKVG +GV+ GM+ DRGY+SP F+ PE VE E+ +L+ D KIS I++++P+LE + PL+I+A DV GEALATLVVN +RGI+ VAA+KAPGF Sbjct: 37 NVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVIAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKMIAEAMDKVGKEGVITVEEGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLVIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGF 281
BLAST of CX292162 vs. ExPASy Swiss-Prot
Match: CH60_GRATL (60 kDa chaperonin, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=groL PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.212e-63 Identity = 125/246 (50.81%), Postives = 178/246 (72.36%), Query Frame = 3 Query: 3 NVVLD-EFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDXKISAI-KDIIPLLEKTTQLRAPLLIIAXDVTGEALATLVVNKLRGILNVAAIKAPGF 734 NVVL+ +FG+P+++NDGVTIA+ IEL D EN G ALIR+ ASKTND AGDGTTTA+VLA I+K GL +V +GANP++LK+GI K V +V ++ + ++PI D+ + +IS+GND +GTMIA+AI +VG +G++ GM+ D+G+ISP FVT+ ++ V +N +L+TD KI+ I ++++P+LEK T+ PLLIIA D+ EALAT++VNKLRGI+NV A++APGF Sbjct: 36 NVVLERKFGAPQIINDGVTIAKEIELQDLAENTGVALIRQAASKTNDVAGDGTTTATVLAHAIVKQGLKNVAAGANPITLKKGIQKAVKFVVGKIAEYSKPICSMQDVTHIGSISSGNDVEVGTMIANAIQQVGKEGIISLEEGQSTSTELDIKEGMKFDKGFISPYFVTDTSRMEVIQDNPYILITDKKITLIQQELLPILEKVTKTGRPLLIIAEDIEKEALATIIVNKLRGIINVVAVRAPGF 281
BLAST of CX292162 vs. ExPASy Swiss-Prot
Match: CH60_DESAA (60 kDa chaperonin OS=Desulfatibacillum alkenivorans (strain AK-01) GN=groL PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.212e-63 Identity = 124/245 (50.61%), Postives = 174/245 (71.02%), Query Frame = 3 Query: 3 NVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDXKISAIKDIIPLLEKTTQLRAPLLIIAXDVTGEALATLVVNKLRGILNVAAIKAPGF 734 NVV+D+ +G+P V DGVT+A+ IEL + EN GA +++EVASKT+D+AGDGTTTA+VLAR I + G+ V +G NP+++KRGIDK V+ L ++P + + +I V TISA D+ IG +IA+A++KVG +GV+ GM+ DRGYISP FVT+ EK++ E+ +L+ + KIS +KD++PLLE+T ++ PLLI+A DV GEALATLVVN+LRG L +AA+KAPGF Sbjct: 36 NVVIDKAWGAPTVTKDGVTVAKEIELENKFENMGAQMVKEVASKTSDTAGDGTTTATVLARAIYEEGMKLVVAGNNPMAIKRGIDKACEAAVKSLMNLSKPTKEQREIAQVGTISANTDETIGNIIAEAMNKVGKEGVITVEEAKSMDTTLDVVEGMQFDRGYISPYFVTDSEKMVCSLEDPYILIHEKKISNMKDLLPLLEQTAKMGKPLLIVAEDVEGEALATLVVNRLRGTLQIAAVKAPGF 280
BLAST of CX292162 vs. ExPASy Swiss-Prot
Match: CH60_CAUCR (60 kDa chaperonin OS=Caulobacter crescentus GN=groL PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.212e-63 Identity = 127/245 (51.84%), Postives = 171/245 (69.80%), Query Frame = 3 Query: 3 NVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDXKISAIKDIIPLLEKTTQLRAPLLIIAXDVTGEALATLVVNKLRGILNVAAIKAPGF 734 NVV+++ FG+P+ DGV++A+ IELAD EN GA +IREVASKTND AGDGTTTA+VLA+ I++ GL SV +G NP+ LKRGIDK V +E+++ ++ + +I V TISA D +G MIA A+DKVG +GV+ GM+ DRGY+SP F+TN +K+ V+ E +L+ + K+S+++ ++P+LE Q PLLIIA DV GEALATLVVNKLRG L VAA+KAPGF Sbjct: 37 NVVIEKSFGAPRTTKDGVSVAKEIELADKFENLGAQMIREVASKTNDKAGDGTTTATVLAQAIVQEGLKSVAAGMNPMDLKRGIDKAVAIAIEDIKTSSKKVTTNAEIAQVGTISANGDKEVGEMIAKAMDKVGNEGVITVEEAKTAETELDVVEGMQFDRGYLSPYFITNADKMEVQLEEPLILLFEKKLSSLQPLLPVLEAVVQSGRPLLIIAEDVEGEALATLVVNKLRGGLRVAAVKAPGF 281
BLAST of CX292162 vs. ExPASy Swiss-Prot
Match: CH60_CAUCN (60 kDa chaperonin OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=groL PE=2 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.212e-63 Identity = 127/245 (51.84%), Postives = 171/245 (69.80%), Query Frame = 3 Query: 3 NVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDXKISAIKDIIPLLEKTTQLRAPLLIIAXDVTGEALATLVVNKLRGILNVAAIKAPGF 734 NVV+++ FG+P+ DGV++A+ IELAD EN GA +IREVASKTND AGDGTTTA+VLA+ I++ GL SV +G NP+ LKRGIDK V +E+++ ++ + +I V TISA D +G MIA A+DKVG +GV+ GM+ DRGY+SP F+TN +K+ V+ E +L+ + K+S+++ ++P+LE Q PLLIIA DV GEALATLVVNKLRG L VAA+KAPGF Sbjct: 37 NVVIEKSFGAPRTTKDGVSVAKEIELADKFENLGAQMIREVASKTNDKAGDGTTTATVLAQAIVQEGLKSVAAGMNPMDLKRGIDKAVAIAIEDIKTSSKKVTTNAEIAQVGTISANGDKEVGEMIAKAMDKVGNEGVITVEEAKTAETELDVVEGMQFDRGYLSPYFITNADKMEVQLEEPLILLFEKKLSSLQPLLPVLEAVVQSGRPLLIIAEDVEGEALATLVVNKLRGGLRVAAVKAPGF 281
BLAST of CX292162 vs. ExPASy Swiss-Prot
Match: CH604_RHILO (60 kDa chaperonin 4 OS=Rhizobium loti GN=groL4 PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.212e-63 Identity = 125/245 (51.02%), Postives = 172/245 (70.20%), Query Frame = 3 Query: 3 NVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDXKISAIKDIIPLLEKTTQLRAPLLIIAXDVTGEALATLVVNKLRGILNVAAIKAPGF 734 NVV+D+ FG+P++ DGVT+A+ IEL D EN GA ++REVASKTND AGDGTTTA+VLA+ I++ G +V +G NP+ LKRGID V +V L K A+ I+ +++ V TISA D+ +G MIA+A+ KVG +GV+ GM+ DRGY+SP FVTN +K++ + E+A +L+ + K+S ++ ++P+LE Q PLLII+ DV GEALATLVVNKLRG L +AA+KAPGF Sbjct: 37 NVVIDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQSIVQEGHKAVAAGMNPMDLKRGIDLAVSEVVAALGKAAKKIKTSEEVAQVGTISANGDESVGKMIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNADKMVADLEDAYILLHEKKLSNLQAMLPVLEAVVQTSKPLLIISEDVEGEALATLVVNKLRGGLKIAAVKAPGF 281
BLAST of CX292162 vs. ExPASy Swiss-Prot
Match: CH603_SYNAS (60 kDa chaperonin 3 OS=Syntrophus aciditrophicus (strain SB) GN=groL3 PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.212e-63 Identity = 123/242 (50.83%), Postives = 170/242 (70.25%), Query Frame = 3 Query: 9 VLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDXKISAIKDIIPLLEKTTQLRAPLLIIAXDVTGEALATLVVNKLRGILNVAAIKAPGF 734 + +G+P+V DGVT+A+ IEL D EN GA +++EVASKT+D AGDGTTTA+VLA+ I + G V SG NP+SLKRGIDK V +V+EL+KR++ I + +I + TISA ND IG +I++A++KVG DGV+ GM+ DRGY+SP FVT+ EK+ V ++ +L+ + KISA+KD++PLLE+ + PLL++A D+ GEALATLVVNK+RG L A+KAPGF Sbjct: 40 IAKSWGAPQVTKDGVTVAKEIELEDKFENMGAQMVKEVASKTSDKAGDGTTTATVLAQAIYREGSKLVVSGMNPMSLKRGIDKGVALVVDELKKRSKTISDKKEIAQIGTISANNDATIGNIISEAMEKVGKDGVITVEEAKGMETELEIVEGMQFDRGYVSPYFVTDAEKMEVRLDDPYILLHEKKISAMKDMVPLLEQIAKTGKPLLLVAEDIEGEALATLVVNKMRGTLKCVAVKAPGF 281
BLAST of CX292162 vs. ExPASy Swiss-Prot
Match: CH601_SINMW (60 kDa chaperonin 1 OS=Sinorhizobium medicae (strain WSM419) GN=groL1 PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.212e-63 Identity = 126/245 (51.43%), Postives = 172/245 (70.20%), Query Frame = 3 Query: 3 NVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDXKISAIKDIIPLLEKTTQLRAPLLIIAXDVTGEALATLVVNKLRGILNVAAIKAPGF 734 NVV+D+ FG+P++ DGV++A+ IEL D EN GA ++REVASKTND AGDGTTTA+VLA+ I++ G +V +G NP+ LKRGID V +V++L +A+ I D++ V TISA + IG IA+A+ KVG +GV+ GM+ DRGY+SP FVTNPEK++ + E+A +L+ + K+S ++ ++P+LE Q PLLIIA DV GEALATLVVNKLRG L +AA+KAPGF Sbjct: 37 NVVIDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDLAVAEVVKDLLAKAKKINTSDEVAQVGTISANGEKQIGLDIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLEDAYILLHEKKLSNLQAMLPVLEAVVQTGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGF 281
BLAST of CX292162 vs. ExPASy Swiss-Prot
Match: CH601_RHOPB (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain BisB18) GN=groL1 PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.212e-63 Identity = 126/245 (51.43%), Postives = 169/245 (68.98%), Query Frame = 3 Query: 3 NVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDXKISAIKDIIPLLEKTTQLRAPLLIIAXDVTGEALATLVVNKLRGILNVAAIKAPGF 734 NVVLD+ FG+P++ DGVT+A+ IEL D EN GA ++REVASK+ D AGDGTTTA+VLA I++ G SV +G NP+ LKRGID V +V +L K ++ + ++I V TISA D IG ++DA+ KVG +GV+ GM+ DRGYISP FVTN +K+ VEF++A +L+ + K+S + +++PLLE Q PL+I+A DV GEALATLVVN+LRG L VAA+KAPGF Sbjct: 37 NVVLDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKSADLAGDGTTTATVLAAAIVREGAKSVAAGMNPMDLKRGIDLAVEAVVADLVKNSKKVTSNEEIAQVGTISANGDAEIGKFLSDAMKKVGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFVTNADKMRVEFDDAYILINEKKLSNLNELLPLLEAVVQTGKPLVIVAEDVEGEALATLVVNRLRGGLKVAAVKAPGF 281
BLAST of CX292162 vs. ExPASy Swiss-Prot
Match: CH601_NITHX (60 kDa chaperonin 1 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=groL1 PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.212e-63 Identity = 127/245 (51.84%), Postives = 169/245 (68.98%), Query Frame = 3 Query: 3 NVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDXKISAIKDIIPLLEKTTQLRAPLLIIAXDVTGEALATLVVNKLRGILNVAAIKAPGF 734 NVVLD+ +G+P++ DGVT+A+ IEL D EN GA ++REVASK+ D+AGDGTTTA+VLA I+K G SV +G NP+ LKRGID V +V +L + ++ + ++I V TIS+ D IG +ADA+ KVG +GV+ GM+ DRGYISP FVTN +K+ VE E+A VL+ + K+S + +++PLLE Q PL+IIA DV GEALATLVVN+LRG L VAA+KAPGF Sbjct: 37 NVVLDKSYGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKSADAAGDGTTTATVLAAAIVKEGAKSVAAGMNPMDLKRGIDLAVEAVVADLVRNSKKVTSNEEIAQVGTISSNGDTEIGKFLADAMKKVGNEGVITVEEAKSLETELEIVEGMQFDRGYISPYFVTNADKMRVEMEDAYVLINEKKLSQLNELLPLLEAVVQSGKPLVIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGF 281 The following BLAST results are available for this feature:
BLAST of CX292162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292162 ID=CX292162; Name=CX292162; organism=Citrus clementina; type=EST; length=736bpback to top |