CX293823
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.962e-14 Identity = 45/149 (30.20%), Postives = 81/149 (54.36%), Query Frame = 3 Query: 21 MTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 +T ++L + +E ++ NL +KE ++++K +QSV +IG+ L +D IV +++G Y V S +D+E L G V L + ++ LP E D + + ++ ++SY +GGL Q +E+RE++ELPL + E Sbjct: 40 LTTLERQLAHLQVMEDYIKLETRNL---EKELLHAQEEVKRIQSVPLVIGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGE 185
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.563e-14 Identity = 43/114 (37.72%), Postives = 67/114 (58.77%), Query Frame = 3 Query: 126 EDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 E ++ L+ +G + +D+ IV ++ GP + V S VDK KL G V+L+ TL+++ + EVDP+V M E SYS +GGL Q++E++E+IELPL +PE Sbjct: 95 EKIIEELRGDPLTVGNLEEIIDDNHAIVSSTVGPEHYVRIMSFVDKSKLYLGATVLLNNKTLSVVGVIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPE 208
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.709e-14 Identity = 44/146 (30.14%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 45 LQHKEIE----SRVRSVKENLRAA-KKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 L H E++ +++ V E RA + +++ +Q +G V+ + +++VK + +Y+V V+ ++L +G RV L + + R LP +VDP+V M+ E + +Y +GGL +QI+E+RE IELP+ +PE Sbjct: 75 LDHLEVQIAKKTKILRVLEQKRAELNRRVRFLREEISIVQEPSSNVGVVVEKMGKMQVLVKTNPDGKYLVKVEPGVNYDELKAGVRVALRSDSYDVHRILPTKVDPLVSLMMVEKVPDSTYQMIGGLDEQIKEIREVIELPIKHPE 220
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.700e-13 Identity = 39/129 (30.23%), Postives = 72/129 (55.81%), Query Frame = 3 Query: 81 VKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 VK+ + K+E + ++++K +QSV +IG+ + +D IV +++G Y V S +++E L V L + ++ LP E D + + + +VSY+ +GG Q +E+RE++ELPL + E Sbjct: 51 VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHE 179
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 8.243e-13 Identity = 48/154 (31.17%), Postives = 79/154 (51.30%), Query Frame = 3 Query: 24 TEYRKKLLQHKEIESRVRSVKENLR---AAKKEFNKTEDD---LKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 T R KLL+ + I+ + E +R K + K E++ + L+ +G + +D+ IV S G + V S VDK++L G V+L+ ++ L + DP+V M E +Y+ +GGL QI+E++ES+ELPL +PE Sbjct: 55 TRCRLKLLKLERIKDYLMMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPE 208
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12 Identity = 46/151 (30.46%), Postives = 79/151 (52.32%), Query Frame = 3 Query: 33 RKKLLQHKEIESRVRSVKE---NLRAAKKEFNKTEDD---LKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 R KLL+ + I+ + +E N K + + E++ + L+ +G + +D++ IV + G + V S VDKE+L G V+L+ ++ L + DP+V M E +Y+ VGGL QI+E++E++ELPL +PE Sbjct: 62 RLKLLKSERIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPE 212
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.406e-12 Identity = 45/154 (29.22%), Postives = 83/154 (53.90%), Query Frame = 3 Query: 24 TEYRKKLLQHKEIESRVRSVKE---NLRAAKKEFNKTEDD---LKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 T R +LL+ + I + +E N K + +T+++ + ++ +G + +D++ IV +++GP Y V S VDK+ L G V+L ++I+ L + DP++ M + SY+ +GGL QI+E++E++ELPL +PE Sbjct: 63 TRCRLRLLKMQRIHDHLLMEEEYVQNQERLKPQDERTQEERNRVDEIRGTPMSVGTLEEIIDDDHAIV-STAGPEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPE 215
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.406e-12 Identity = 45/144 (31.25%), Postives = 78/144 (54.17%), Query Frame = 3 Query: 36 KKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 KKL +E + S+ E ++++ N + ++ L+ +G + +D+ I+ G Y V S VDK+ L G V+L+ +++ L E+DP+V M E + +Y+ +GGL +QI+E++ES+ELPL NPE Sbjct: 51 KKLAHLLSLEDNILSLCEPDKSSEGS-NSQKHVVEQLRGSPLSVGTLEEFVDDHHGIITTGVGLEYYVNIMSFVDKDLLEPGCTVLLNYKDNSVVGVLEGEMDPMVNVMKLEKAPSETYADIGGLEEQIQEIKESVELPLTNPE 193
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS4_RAT (26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.398e-12 Identity = 47/154 (30.52%), Postives = 82/154 (53.25%), Query Frame = 3 Query: 24 TEYRKKLLQHKEIESRVRSVKENLRAAK--KEFNKTEDDLKS----LQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 T+ R KLL+ + I+ + +E +R + K + +++ +S L+ +G + +D+ IV S G + V S VDK+ L G V+L+ ++ L + DP+V M E +Y+ +GGL +QI+E++ES+ELPL +PE Sbjct: 56 TQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPE 209
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS4_MOUSE (26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.398e-12 Identity = 47/154 (30.52%), Postives = 82/154 (53.25%), Query Frame = 3 Query: 24 TEYRKKLLQHKEIESRVRSVKENLRAAK--KEFNKTEDDLKS----LQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 T+ R KLL+ + I+ + +E +R + K + +++ +S L+ +G + +D+ IV S G + V S VDK+ L G V+L+ ++ L + DP+V M E +Y+ +GGL +QI+E++ES+ELPL +PE Sbjct: 56 TQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPE 209 The following BLAST results are available for this feature:
BLAST of CX293823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293823 ID=CX293823; Name=CX293823; organism=Citrus clementina; type=EST; length=469bpback to top |