CX293823
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 1.803e-76 Identity = 143/154 (92.86%), Postives = 149/154 (96.75%), Query Frame = 3 Query: 6 RRRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467
RR A+T+YRKKLL HKE+ESRVR+ +ENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGN+SYSAVGGL DQIRELRESIELPLMNPE
Sbjct: 10 RRTAAVTDYRKKLLHHKELESRVRTARENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPE 163
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PS10A_ARATH (26S protease regulatory subunit 10B homolog A OS=Arabidopsis thaliana GN=RPT4A PE=2 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 1.803e-76 Identity = 143/154 (92.86%), Postives = 149/154 (96.75%), Query Frame = 3 Query: 6 RRRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467
RR A++EYRKKLLQHKE+ESRVR+ +ENLR AKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGN+SYSAVGGL DQIRELRESIELPLMNPE
Sbjct: 10 RRTAAVSEYRKKLLQHKELESRVRTARENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPE 163
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 7.122e-57 Identity = 105/153 (68.63%), Postives = 129/153 (84.31%), Query Frame = 3 Query: 9 RRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467
R A+ +YRKKLL+HKEI+ R++ ++E L+ K++ K+E+DLK+LQSVGQI+GEVL+ L E+ IVKA++GPRYVVGCR ++DK KL GTRV LDMTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE IELPL NPE
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPE 157
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 7.122e-57 Identity = 105/153 (68.63%), Postives = 129/153 (84.31%), Query Frame = 3 Query: 9 RRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467
R A+ +YRKKLL+HKEI+ R++ ++E L+ K++ K+E+DLK+LQSVGQI+GEVL+ L E+ IVKA++GPRYVVGCR ++DK KL GTRV LDMTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE IELPL NPE
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPE 157
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 7.122e-57 Identity = 105/153 (68.63%), Postives = 129/153 (84.31%), Query Frame = 3 Query: 9 RRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467
R A+ +YRKKLL+HKEI+ R++ ++E L+ K++ K+E+DLK+LQSVGQI+GEVL+ L E+ IVKA++GPRYVVGCR ++DK KL GTRV LDMTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE IELPL NPE
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPE 157
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS10_BOVIN (26S protease regulatory subunit S10B OS=Bos taurus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 7.122e-57 Identity = 105/153 (68.63%), Postives = 129/153 (84.31%), Query Frame = 3 Query: 9 RRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467
R A+ +YRKKLL+HKEI+ R++ ++E L+ K++ K+E+DLK+LQSVGQI+GEVL+ L E+ IVKA++GPRYVVGCR ++DK KL GTRV LDMTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE IELPL NPE
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPE 157
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 6.898e-52 Identity = 100/153 (65.36%), Postives = 125/153 (81.70%), Query Frame = 3 Query: 9 RRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467
R A+ +Y+ LLQH+E +S+++ ++ R K+++KTEDD+KSLQSVGQIIGEVL+ LD+ER IVKASSGPRYVVGCR+ VD+ L G RV LDMTTLTIMR LPREVDP+VYNM EDPG++S++ VGGL++QIRELRE IELPL NPE
Sbjct: 4 RDTALEKYKSYLLQHREWDSKLKDLRFGNRDLVKKYDKTEDDIKSLQSVGQIIGEVLKQLDSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPE 156
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS10_CAEEL (Probable 26S protease regulatory subunit S10B OS=Caenorhabditis elegans GN=rpt-4 PE=1 SV=2) HSP 1 Score: 201.83 bits (512), Expect = 1.177e-51 Identity = 95/153 (62.09%), Postives = 125/153 (81.70%), Query Frame = 3 Query: 9 RRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467
R A+ YR+KL + ++IE +++ +++ K+F+K+E+D+KSLQSVGQI+GEVL+ L E+ IVKA++GPRYVVGCR ++KE+L GTRV LDMTTLTIMR LPREVDP+VY M HEDPGN+SYS VGGL++QIRELRE +ELPL+NPE
Sbjct: 22 RTKALNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPE 174
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS10_YEAST (26S protease subunit RPT4 OS=Saccharomyces cerevisiae GN=RPT4 PE=1 SV=4) HSP 1 Score: 181.8 bits (460), Expect = 1.260e-45 Identity = 82/150 (54.67%), Postives = 119/150 (79.33%), Query Frame = 3 Query: 18 AMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467
A+ ++++KLL+H+ + +++ ++N+R +K ++KTE+D+K+LQS+GQ+IGEV++ L E+ IVKASSGPRY+VG R+ VD+ KL G RV LD+TTLTIMR LPRE DP+VYNM + G +++ +GGL++QIRELRE IELPL NPE
Sbjct: 56 ALNQFKRKLLEHRRYDDQLKQRRQNIRDLEKLYDKTENDIKALQSIGQLIGEVMKELSEEKYIVKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPE 205
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS10_DICDI (26S protease regulatory subunit S10B OS=Dictyostelium discoideum GN=psmC6 PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 8.167e-45 Identity = 87/155 (56.13%), Postives = 114/155 (73.55%), Query Frame = 3 Query: 6 RRRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKL-TSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467
++ A+ YR +L++HK E R+ E ++ KK+F KTED +K++Q +G+IIGEVLR LD ER IVKA +GPRYVV C + DK L G RV LD+TTLTI++ LPREVDP+++NM E PG+VSY +GGLS+QIRELRE +ELPLM PE
Sbjct: 7 KKEQALQNYRDRLIEHKNAELRLNKAHELIKKLKKDFQKTEDHIKTIQYIGEIIGEVLRSLDEERFIVKACNGPRYVVRCANYQDKAHLLVPGARVTLDLTTLTILKILPREVDPIIFNMTAESPGSVSYGEIGGLSNQIRELREVVELPLMIPE 161 The following BLAST results are available for this feature:
BLAST of CX293823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84 ZOOMx 1POSITION0
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293823 ID=CX293823; Name=CX293823; organism=Citrus clementina; type=EST; length=469bpback to top |