CX293823

Overview
NameCX293823
Unique NameCX293823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length469
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.715e-18
Identity = 49/148 (33.11%), Postives = 86/148 (58.11%), Query Frame = 3
Query:   24 TEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467
            TE R++L   ++IE+  R ++      ++E  K + +++ ++S   +IG V   +D  R+IV++S+GPR++VG    ++ E++  G R  L+  +L I+  LP   D  +Y M   +  +  Y  +GGL  QI E+RE++ELPL  PE
Sbjct:   33 TELREQL---RQIEADKRYLETQKVRYEREVRKFKGEIEQMKSPPLVIGTVTDLIDENRVIVRSSAGPRFLVGISQSLNIEEIKPGARCTLNQQSLAIVEILPTNYDAQIYGMEVIEAPSERYEEIGGLEKQINEIREAVELPLKKPE 177          
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.240e-18
Identity = 53/158 (33.54%), Postives = 89/158 (56.33%), Query Frame = 3
Query:   15 NAMTEYRKKLLQHKEIESRVRSVKENLR---AAKKEFN----KTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467
            N +  Y    +Q KEI   +R   ENLR   A + E N      +++L+ LQ  G  +GEV++ +  +++++K S   +Y+V     ++ + LT G RV L   +  + + LP ++DP+V  M  E   + +Y  VGGL +QI+E++E IELP+ +PE
Sbjct:   25 NGLKNYYIAKIQEKEIV--LRDKIENLRRLQAQRNELNGRVRSLKEELQQLQEPGSHVGEVVKVMGKKKVLIKISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLMKVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHPE 180          
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.925e-18
Identity = 54/157 (34.39%), Postives = 92/157 (58.60%), Query Frame = 3
Query:   21 MTEYRKKLLQHKEIESRVRSV--------KENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467
            + E+++K  Q  E+ES+V  +        +EN++  KKE    + +L  L+    I+G +L  ++  + +VK+S+GP ++V     VD E +  G RV L+  TL I+  LP+E D     M  E+  ++S+  +GGL++QIR+++E +ELPL NPE
Sbjct:   18 LKEFKEKT-QIAELESKVLRLELKNKDINRENVQI-KKENEILKRELDKLRIPPLILGTILDKVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPE 172          
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.925e-18
Identity = 54/157 (34.39%), Postives = 92/157 (58.60%), Query Frame = 3
Query:   21 MTEYRKKLLQHKEIESRVRSV--------KENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467
            + E+++K  Q  E+ES+V  +        +EN++  KKE    + +L  L+    I+G +L  ++  + +VK+S+GP ++V     VD E +  G RV L+  TL I+  LP+E D     M  E+  ++S+  +GGL++QIR+++E +ELPL NPE
Sbjct:   18 LKEFKEKT-QIAELESKVLRLELKNKDVTRENVQI-KKENEILKRELDKLRIPPLILGTILDKVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPE 172          
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 3.820e-18
Identity = 54/157 (34.39%), Postives = 92/157 (58.60%), Query Frame = 3
Query:   21 MTEYRKKLLQHKEIESRVRSV--------KENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467
            + E+++K  Q  E+ES+V  +        +EN++  KKE    + +L  L+    I+G +L  ++  + +VK+S+GP ++V     VD E +  G RV L+  TL I+  LP+E D     M  E+  ++S+  +GGL++QIR+++E +ELPL NPE
Sbjct:   18 LKEFKEKT-QIAELESKVLRLELKNKDISRENVQI-KKENEILKRELDKLRIPPLILGTILDRVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPE 172          
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 6.517e-18
Identity = 49/145 (33.79%), Postives = 84/145 (57.93%), Query Frame = 3
Query:   54 KEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467
            +E++  V    +NLR  + + N+         ++L+ LQ  G  +GEV++P+D ++++VK     ++VV     VD   +T+  RV L   + T+ + LP +VDP+V  M+ E   + +Y  VGGL  QI+E++E IELP+ +PE
Sbjct:   25 EELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPE 169          
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 8.511e-18
Identity = 53/157 (33.76%), Postives = 92/157 (58.60%), Query Frame = 3
Query:   21 MTEYRKKLLQHKEIESRVRSV--------KENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467
            + E+++K  Q  E+ES+V  +        +EN++  KKE    + +L  L+    I+G +L  ++  + +VK+S+GP ++V     VD + +  G RV L+  TL I+  LP+E D     M  E+  ++S+  +GGL++QIR+++E +ELPL NPE
Sbjct:   18 LKEFKEKT-QIAELESKVLRLELKNKDISRENVQI-KKENEILKRELDKLRIPPLILGTILDRVNERKAVVKSSTGPNFLVNLSQFVDPDDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPE 172          
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 1.452e-17
Identity = 50/136 (36.76%), Postives = 78/136 (57.35%), Query Frame = 3
Query:   60 IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467
            +E ++ S+ + L   +++ N  + +L+ L +   I   VL  L + ++IV++SSGP  +V   S +D +KL  G+ V L     TI+  LP   D  V +    +  NV YS +GGL++QI E+RE IELPL NPE
Sbjct:   23 LEEKIESLTKELEKLRQDLNWYKGELEKLLAPPYIEAIVLDILPDGKVIVRSSSGPNLIVNVSSNIDIKKLKPGSLVALTQRGSTIVEVLPEREDAYVKSFEVIEKPNVHYSDIGGLNEQINEIREVIELPLKNPE 158          
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.452e-17
Identity = 48/140 (34.29%), Postives = 79/140 (56.43%), Query Frame = 3
Query:   48 QHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467
            Q ++ E+  R ++      ++E  K + + + L+S   IIG V+  +D  R+IV++S+GPR++V     V+ + +  G R  L+  +L I+  LP   D  VY M   D     Y+ +GGL +QI E+RE++ELPL  PE
Sbjct:   63 QIRQAEADKRYIETQKIRYEREVRKLKSESEQLRSPPLIIGTVVDVVDANRVIVRSSAGPRFLVRSSPSVNPDDIKPGARCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYTDIGGLKEQINEVREAVELPLKRPE 202          
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS8_DROME (26S protease regulatory subunit 8 OS=Drosophila melanogaster GN=Pros45 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.896e-17
Identity = 48/145 (33.10%), Postives = 83/145 (57.24%), Query Frame = 3
Query:   54 KEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467
            +E++  V    +NLR  + + N+         ++L+ LQ  G  +GEV++P+D ++++VK     ++VV     +D   +T   RV L   + T+ + LP +VDP+V  M+ E   + +Y  VGGL  QI+E++E IELP+ +PE
Sbjct:   28 EELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPE 172          
The following BLAST results are available for this feature:
BLAST of CX293823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
PSMR_METPE1.715e-1833.11Proteasome-activating nucleotidase OS=Methanosphae... [more]
PRS8_NAEFO2.240e-1833.5426S protease regulatory subunit 8 homolog OS=Naegl... [more]
PSMR_METMP2.925e-1834.39Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METM72.925e-1834.39Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METM63.820e-1834.39Proteasome-activating nucleotidase OS=Methanococcu... [more]
PRS8_MANSE6.517e-1833.7926S protease regulatory subunit 8 OS=Manduca sexta... [more]
PSMR_METM58.511e-1833.76Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_SULTO1.452e-1736.76Proteasome-activating nucleotidase OS=Sulfolobus t... [more]
PSMR_METB61.452e-1734.29Proteasome-activating nucleotidase OS=Methanoregul... [more]
PRS8_DROME1.896e-1733.1026S protease regulatory subunit 8 OS=Drosophila me... [more]

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Properties
Property NameValue
Genbank descriptionC05001B03SK FlavSen1 Citrus clementina cDNA clone C05001B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293823 ID=CX293823; Name=CX293823; organism=Citrus clementina; type=EST; length=469bp
CCGTTAGACGCCGTAATGCCATGACGGAGTACCGTAAGAAGCTACTCCAG
CACAAAGAAATCGAATCTAGAGTTCGATCTGTTAAGGAGAATTTGAGAGC
TGCAAAGAAGGAGTTCAACAAAACAGAAGATGATTTGAAGTCTCTTCAAA
GTGTTGGGCAGATCATTGGAGAAGTTCTCAGACCTCTTGACAATGAACGC
TTGATTGTTAAAGCTAGCAGCGGGCCCCGTTATGTGGTTGGATGCCGCAG
CAAAGTGGATAAAGAGAAGTTGACTTCGGGAACAAGAGTTGTTCTTGATA
TGACAACGCTCACAATCATGCGAGCTCTTCCTCGTGAAGTTGATCCGGTT
GTATATAACATGTTGCATGAAGATCCGGGTAATGTTAGCTATTCGGCTGT
GGGTGGTTTATCTGATCAGATCAGAGAATTAAGGGAATCTATTGAGCTAC
CTTTGATGAATCCTGAGCT
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