CX293823
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS4_HUMAN (26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.398e-12 Identity = 47/154 (30.52%), Postives = 82/154 (53.25%), Query Frame = 3 Query: 24 TEYRKKLLQHKEIESRVRSVKENLRAAK--KEFNKTEDDLKS----LQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 T+ R KLL+ + I+ + +E +R + K + +++ +S L+ +G + +D+ IV S G + V S VDK+ L G V+L+ ++ L + DP+V M E +Y+ +GGL +QI+E++ES+ELPL +PE Sbjct: 56 TQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPE 209
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.398e-12 Identity = 47/154 (30.52%), Postives = 82/154 (53.25%), Query Frame = 3 Query: 24 TEYRKKLLQHKEIESRVRSVKENLRAAK--KEFNKTEDDLKS----LQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 T+ R KLL+ + I+ + +E +R + K + +++ +S L+ +G + +D+ IV S G + V S VDK+ L G V+L+ ++ L + DP+V M E +Y+ +GGL +QI+E++ES+ELPL +PE Sbjct: 56 TQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPE 209
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.555e-11 Identity = 38/125 (30.40%), Postives = 71/125 (56.80%), Query Frame = 3 Query: 81 VKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPL 455 +K + K+E ++++K ++SV +IG++L +D+ IV+++SG V S +D+E L V L + ++ LP E D ++ + ++ + SYS +GG Q +E+RE++ELPL Sbjct: 46 IKYEYKNLKRELLHAQEEVKRIRSVPLLIGQLLEMVDSNTGIVQSTSGSTLCVRILSTIDRELLKPSASVALQRHSNALVDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPL 170
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS7_YEAST (26S protease regulatory subunit 7 homolog OS=Saccharomyces cerevisiae GN=RPT1 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.523e-11 Identity = 34/93 (36.56%), Postives = 53/93 (56.99%), Query Frame = 3 Query: 189 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 ++ + ++ ++VVG +V + G RV +D + I LP +DP V M E+ +V+YS VGG DQI +LRE +ELPL++PE Sbjct: 141 EDAKYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPE 233 The following BLAST results are available for this feature:
BLAST of CX293823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX293823 ID=CX293823; Name=CX293823; organism=Citrus clementina; type=EST; length=469bpback to top |