CX294080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPFC (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_008750 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.337e-22 Identity = 60/129 (46.51%), Postives = 81/129 (62.79%), Query Frame = 3 Query: 84 SSAVTSNITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCRE----VPNP-VHLTVDT 452 S+ T+ + + P IF+I D +RR ERVIGTLLG+ DGT V+IR+++ V H E +DQV +D+EY ML HLK NP+EV+VGW++T + SALI FY + P+P VHLTV T Sbjct: 21 SAPTTAPLNVVIQPQAIFSILDHSLRRNADQERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEVDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTVST 149
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPNC (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An08g00880 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.844e-21 Identity = 62/143 (43.36%), Postives = 87/143 (60.84%), Query Frame = 3 Query: 84 SSAVTSNITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCRE----VPNP-VHLTVDTGFRNGEGTVKAYVS 494 ++ T+ + + P +F+I D +RR ERVIGTLLG+ DGT V+IR+++ V H E +DQV +D+EY ML HLK NP+EV+VGW++T + SALI FY + P+P VHLTV T T +AY+S Sbjct: 21 TAPTTAPLNVVIQPQALFSILDHSLRRNADQERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEVDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTVSTEAGKDIET-RAYIS 162
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_USTMA (Eukaryotic translation initiation factor 3 subunit F OS=Ustilago maydis GN=UM00175 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.408e-21 Identity = 59/133 (44.36%), Postives = 84/133 (63.16%), Query Frame = 3 Query: 117 VHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVP--NPVHLTVDT---GFRNGEGTVKAYVS 494 VHP+ +F+I D Y+RR D RVIGTLLG+ + ++I+N + VPH E ++ QV +D+EYH +M + KV P EVIVGW++T + SALI +FY RE VHLT+DT G + +K+Y+S Sbjct: 34 VHPVALFSILDHYLRRNDGQHRVIGTLLGT-RTESEIEIKNCFAVPHLEDAEEGQVQVDMEYHRSMYELCQKVRPDEVIVGWYATSPELNTYSALIQDFYSRETAPHQAVHLTMDTTIDGSKPSGLGIKSYIS 165
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_COCIM (Eukaryotic translation initiation factor 3 subunit F OS=Coccidioides immitis GN=CIMG_07134 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.007e-21 Identity = 59/125 (47.20%), Postives = 77/125 (61.60%), Query Frame = 3 Query: 96 TSNITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCRE----VPNP-VHLTVDT 452 T+ + + P IF+I D +RR ERVIGTLLG+ DGT V+IR + V H E +DQV +D+EY ML HLK NP+EV+VGW++T + SALI FY + P+P VHLTV T Sbjct: 25 TAPLNVVIQPQAIFSILDHSLRRNADQERVIGTLLGTRSEDGTEVEIRTCFAVGHTETTDQVEVDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYGGQGDGTWPHPAVHLTVST 149
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_NEUCR (Eukaryotic translation initiation factor 3 subunit F OS=Neurospora crassa GN=1A9.200 PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.321e-19 Identity = 61/163 (37.42%), Postives = 91/163 (55.83%), Query Frame = 3 Query: 66 VLQFGPSSAVTSNITAKVHPLVIFNISDCYVRRPD---QAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCR----EVPNP-VHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLA 527 VL FG S+A +T + P +F+I D VRR D Q+ RVIG L+G DG+ V++R+++ +PH E DQV +D+EY ML LK NP+E ++GW++T + SALI F+ P+P VHLT+ T K Y+S +++ + A Sbjct: 19 VLGFGVSNAP---LTVNIQPQAVFSIIDHAVRRDDRDTQSTRVIGALVGVRSEDGSEVEVRSTFAIPHTENEDQVEVDVEYQKNMLALTLKANPRETLLGWYTTSHELNSFSALIQNFFASPETGTFPHPAVHLTIGTE-AGATIDTKTYISAPVAVSPERAA 177
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EI3F2_DROWI (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila willistoni GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.254e-19 Identity = 49/132 (37.12%), Postives = 80/132 (60.61%), Query Frame = 3 Query: 117 VHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPD-GTVDIRNSYVVPHNEF--SDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVP--NPVHLTVDTGFRNGEGTVKAYVSV 497 + PLV+ +I D Y RRP +VIGTLLG P+ G ++I N + + H ++ SD++ +D++Y + M + + PQE I+GW++TG V+ + +HE+Y RE NP+HL +DT R ++ Y +V Sbjct: 13 LQPLVLLHIIDAYERRPKDCTQVIGTLLGRNNPESGHLEISNCFTLLHKDYPNSDRIDVDLQYANDMYELNQLTYPQEKIIGWYATGKEVSRSAVNLHEYYARECADGNPMHLLIDTSLRGQRMMMRLYTAV 144
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EI3F2_DROSE (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila sechellia GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.944e-19 Identity = 54/142 (38.03%), Postives = 83/142 (58.45%), Query Frame = 3 Query: 102 NITAKVH--PLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREV--PNPVHLTVDTGFRNGEGTVKAYVSVNLSL 509 +I AKV PLV+F I D Y RRP +V+GTLLG D ++I N + VPH E S+ ++ LD+ Y +L+ ++ P E ++GWF TG V+ ++LIH++Y RE P+HL VD +N + + Y +V + + Sbjct: 6 SIRAKVFLKPLVLFQIIDAYDRRPKGDNQVMGTLLGRTKEDH-IEITNCFTVPHKEHSENKRIDLDMAYASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYYVRECGERQPLHLLVDASLKNQRLSTRLYCAVEMGV 146
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EI3F2_DROME (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila melanogaster GN=eIF3-S5-2 PE=3 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 3.845e-19 Identity = 53/142 (37.32%), Postives = 84/142 (59.15%), Query Frame = 3 Query: 102 NITAKVH--PLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREV--PNPVHLTVDTGFRNGEGTVKAYVSVNLSL 509 ++ AKV+ PLV F I D Y RRP +V+GTLLG +G ++I N + VPH E S+ ++ LD+ Y +L+ ++ P E ++GWF TG V+ ++LIH++Y RE P+HL VD +N + + Y +V + + Sbjct: 6 SMRAKVYLKPLVFFQIIDAYDRRPKGDNQVMGTLLGRN-KEGHIEITNCFTVPHKEHSENKRIDLDMAYASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYYVRECCEGQPLHLLVDAALKNQRLSTRLYCAVEMGV 146
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_YARLI (Eukaryotic translation initiation factor 3 subunit F OS=Yarrowia lipolytica GN=YALI0E26851g PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.565e-19 Identity = 47/108 (43.52%), Postives = 72/108 (66.67%), Query Frame = 3 Query: 132 IFNISDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNP-VHLTVD 449 +F I D +RR ++ +VIGTL+G DG+ V++RN+Y VPH+E ++ +D+EY+ TML H K P+EVIVGW++T + S LIH++Y + P +HLTV+ Sbjct: 27 LFQILDHALRREEEQSKVIGTLVGIRSEDGSEVEVRNAYAVPHSESEQEMTIDLEYNPTMLALHRKAFPKEVIVGWYATSSELNTFSGLIHDYYTQLDGTPAIHLTVE 134
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EI3F2_DROSI (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila simulans GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.461e-18 Identity = 50/133 (37.59%), Postives = 78/133 (58.65%), Query Frame = 3 Query: 123 PLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREV--PNPVHLTVDTGFRNGEGTVKAYVSVNLSL 509 PLV+F I D Y RRP +V+GTLLG D ++I N + VPH E S+ ++ LD+ Y +L+ ++ P E ++GWF TG V+ ++LIH++Y RE P+HL VD +N + + Y +V + + Sbjct: 15 PLVLFQIIDAYDRRPKGDNQVMGTLLGRNKEDH-IEITNCFTVPHKEHSENKRIDLDMTYASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYYVRECGERQPLHLLVDASLKNQRLSTRLYCAVEMGV 146 The following BLAST results are available for this feature:
BLAST of CX294080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294080 ID=CX294080; Name=CX294080; organism=Citrus clementina; type=EST; length=619bpback to top |