CX295108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL1_PONAB (Cullin-1 OS=Pongo abelii GN=CUL1 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.481e-24 Identity = 70/229 (30.57%), Postives = 118/229 (51.53%), Query Frame = 3 Query: 99 WQDLCDQMLMIRGIALYLDRTYVKQT-----PNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALG--------------IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTG 725 W+D ++ GI YL+R +V++ + ++ + L +R L + + + +L++IE+ER GE ++ L++ +++ + LG +Y ESFE FL T FY E +++QQ+ V +Y+K E RL EE R +YL ST+ L E+ L+E+H+ I F L+D + EDL RMY+L SR+ + L L++ L +I G Sbjct: 123 WEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRDCL--FRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLE-IFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQG 348
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL1_MOUSE (Cullin-1 OS=Mus musculus GN=Cul1 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.481e-24 Identity = 70/229 (30.57%), Postives = 118/229 (51.53%), Query Frame = 3 Query: 99 WQDLCDQMLMIRGIALYLDRTYVKQT-----PNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALG--------------IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTG 725 W+D ++ GI YL+R +V++ + ++ + L +R L + + + +L++IE+ER GE ++ L++ +++ + LG +Y ESFE FL T FY E +++QQ+ V +Y+K E RL EE R +YL ST+ L E+ L+E+H+ I F L+D + EDL RMY+L SR+ + L L++ L +I G Sbjct: 123 WEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRDCL--FRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLE-IFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQG 348
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL1_HUMAN (Cullin-1 OS=Homo sapiens GN=CUL1 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.481e-24 Identity = 70/229 (30.57%), Postives = 118/229 (51.53%), Query Frame = 3 Query: 99 WQDLCDQMLMIRGIALYLDRTYVKQT-----PNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALG--------------IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTG 725 W+D ++ GI YL+R +V++ + ++ + L +R L + + + +L++IE+ER GE ++ L++ +++ + LG +Y ESFE FL T FY E +++QQ+ V +Y+K E RL EE R +YL ST+ L E+ L+E+H+ I F L+D + EDL RMY+L SR+ + L L++ L +I G Sbjct: 123 WEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRDCL--FRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLE-IFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQG 348
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL3_CAEEL (Cullin-3 OS=Caenorhabditis elegans GN=cul-3 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.638e-23 Identity = 70/253 (27.67%), Postives = 127/253 (50.20%), Query Frame = 3 Query: 30 AAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALGI-----YSESFEKPFLECTSEFYAAEGMKYMQ-QSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAIL---DKGFTMLMDGHRTEDLQRMYSLFSRV--------NALESLRQALAMYIRRTGHGIV 737 A++R + +S + FL V W D M+MIR I +Y+DR YV Q +V ++++GL +R + + + + LL +I+ +R ++ + + M +LGI Y + FE+P L+ TS++Y ++ +D YL VEI +H+E R YLD T ++ + ++ HI I+ + G +++ + EDL R++ +F R+ L++L +A++ Y+ TG IV Sbjct: 83 ASVRIRIIESMNSGSFLETVAESWADHTVAMVMIRDILMYMDRIYVAQNNHVLPVYNLGLDAYRTEILRQNGIGDRIRDALLELIKLDRKSNQINWHGIKNACDMLISLGIDSRTVYEDEFERPLLKETSDYYRDVCKNWLSGDNDACFYLAQVEIAMHDEASRASRYLDKMTEAKILQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKRIGDSVTVPGGGLKALLKAVSEYLNETGSNIV 335
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL1_DICDI (Cullin-1 OS=Dictyostelium discoideum GN=culA PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.649e-23 Identity = 69/227 (30.40%), Postives = 116/227 (51.10%), Query Frame = 3 Query: 99 WQDLCDQMLMIRGIALYLDRTYVKQT-----PNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALG------------IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTG 725 W M I I Y++R ++K+ V ++ + L ++R L ++ ++ + LL +IE ER G ++ L+ ++ + +LG +Y FE+ FL T +Y E K++ ++ V DY+K VE RL+EE +R YL +T LIA E+ L+E+H+ I ++ F L++ + DL RMYSL SR+ LE LR L +++ G Sbjct: 116 WDRYTSAMKYINNIFQYMNRYWIKREIDDGKKEVYEIFILSLVIWRDCL--FTPLKQRLTNSLLDIIESERNGYQINTHLIKGVINGYVSLGLNREKPKETILQVYKSGFEELFLTATENYYTNESAKFISENSVADYMKKVETRLNEEVKRVQQYLHQNTESELIAKCEKVLIEKHVEVIWNE-FQTLLEKDKIPDLTRMYSLLSRIPRGLEPLRTTLEKHVQNVG 339
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL3_SCHPO (Cullin-3 OS=Schizosaccharomyces pombe GN=cul3 PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 6.224e-23 Identity = 75/229 (32.75%), Postives = 111/229 (48.47%), Query Frame = 3 Query: 75 FLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKYLSSYS-EVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALG-------IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDK---GFTMLMDGHRTEDLQRMYSLFSRVN-ALESLRQALAMYIRRTG 725 FLS + W+D M MI + YLD+ Y K V + + G+ +FR+ + S E+ K V +L ++ ER G ++R L+N L M +L +Y F FL T FY E + V +YLK E R EE ER YL PL++ E +LL +H+ +L+ GF ++D E LQ +Y FSRV ++SL++ LA Y+ G Sbjct: 121 FLSSLVNSWKDHIVSMQMISSVLKYLDKVYSKSADKV-PVNENGIYIFREVVLLNSFEIGEKCVETILILVYLERKGNTINRPLINDCLDMLNSLPSENKKETLYDVLFAPKFLSYTRNFYEIESSTVIGVFGVVEYLKKAEKRFEEEKERSKNYLFTKIASPLLSVVEDELLSKHLDDLLENQSTGFFSMIDSSNFEGLQLVYESFSRVELGVKSLKKYLAKYVAHHG 348
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL1_CAEEL (Cullin-1 OS=Caenorhabditis elegans GN=cul-1 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.533e-21 Identity = 66/235 (28.09%), Postives = 119/235 (50.64%), Query Frame = 3 Query: 99 WQDLCDQMLMIRGIALYLDRTYVKQT-----PNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALGI------------------YSESFEKPFLECTSEFYAAEGMKYMQQS-DVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTGH 728 W++ ++ GI YL+R ++++ N+ ++ + L ++++ L +++++ K + +L +I ER G ++ ++ +++ LG+ Y E FE FLE T FY E ++ +V DY+ VE RL++E +RC LYL+ ST+ PL E L+ + L + F L+ R +DL RM+ L RV N L+ LR++L +I + GH Sbjct: 119 WENFRISSKVMDGIFAYLNRHWIRRELDEGHENIYMVYTLALVVWKRNL--FNDLKDKVIDAMLELIRSERTGSMINSRYISGVVECLVELGVDDSETDAKKDAETKKLAVYKEFFEVKFLEATRGFYTQEAANFLSNGGNVTDYMIKVETRLNQEDDRCQLYLNSSTKTPLATCCESVLISNQLD-FLQRHFGGLLVDKRDDDLSRMFKLCDRVPNGLDELRKSLENHIAKEGH 350
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL1_SCHPO (Cullin-1 OS=Schizosaccharomyces pombe GN=cul1 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.937e-21 Identity = 72/238 (30.25%), Postives = 109/238 (45.80%), Query Frame = 3 Query: 78 LSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPN-----VRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALGI------------YSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTGHGIV 737 L+ + W I + YL+R +VK V ++ + L + ++ +S + + LL M ++RL E D + + T+L Y FE F+E T FYA E +Y+ + DYLK EIRL EE E LYL ST KPL+ E L+ +H +L F ++D + +ED+ RMY L SR N L+ LRQ +++R+G V Sbjct: 111 LAAYAKYWTRFTTSARFINHLFGYLNRYWVKLKNRFTETLVYDIYTLCLVSWHHHV--FSHIRDSLLQNLLYMFTKKRLYEPTDMKYVEVCVDSITSLSFDKTDMTKPNLSSYKTFFETNFIENTKNFYAKESSEYLASHSITDYLKKAEIRLAEEEELVRLYLHESTLKPLLEATEDVLIAQH-EEVLHNDFARMLDQNCSEDIIRMYRLMSRTPNGLQPLRQTFEEFVKRSGFAAV 345
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL1_ARATH (Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.776e-20 Identity = 65/248 (26.21%), Postives = 125/248 (50.40%), Query Frame = 3 Query: 21 HISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALGI-----YSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDK---GFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTGHGIV 737 +I++ + + + D + L +R W + + + YLDR ++ + ++ L ++GL FR + Y+E+ K ++ ++++ER GE +DR LL ++L ++ +G+ Y E FE L+ TS +Y+ + ++Q+ PDY+ E L +E ER YL S+ L+ + +LL S +L+K G L+ + +DL RMY L+ ++ LE + ++ G+ +V Sbjct: 73 YINSTVLPALREKHDEFMLRELFKR-WSNHKVMVRWLSRFFYYLDRYFIARR-SLPPLNEVGLTCFRDLV--YNELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIYVEIGMGQMERYEEDFESFMLQDTSSYYSRKASSWIQEDSCPDYMLKSEECLKKERERVAHYLHSSSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKVDDLSRMYRLYHKILRGLEPVANIFKQHVTAEGNALV 316
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL1_DROME (Cullin homolog 1 OS=Drosophila melanogaster GN=lin19 PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 7.121e-19 Identity = 69/246 (28.05%), Postives = 118/246 (47.97%), Query Frame = 3 Query: 72 VFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQT-----PNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALG--------------IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERC--------LLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQALAMYIRRTG 725 V LS + W+ ++ GI YL+R +VK+ + ++ + L ++ +L + + +L+ IE ER G+ ++R+L+ +++ + L +Y ++FE F+ TS FY E ++ + V +YLKHVE RL EE +R L YL +T L +T E L+E+H+ I F L++ R +DL+RMYSL + + L L+ L +I G Sbjct: 105 VLLSRYTKQWKSYQFSSTVLDGICNYLNRNWVKRECEEGQKGIYKIYRLALVAWKGHL--FQVLNEPVTKAVLKSIEEERQGKLINRSLVRDVIECYVELSFNEEDTDAEQQKLSVYKQNFENKFIADTSAFYEKESDAFLSTNTVTEYLKHVENRLEEETQRVRGFNSKNGLSYLHETTADVLKSTCEEVLIEKHLK-IFHTEFQNLLNADRNDDLKRMYSLVALSSKNLTDLKSILENHILHQG 347 The following BLAST results are available for this feature:
BLAST of CX295108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295108 ID=CX295108; Name=CX295108; organism=Citrus clementina; type=EST; length=743bpback to top |