CX295108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL4B_HUMAN (Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=3) HSP 1 Score: 237.269 bits (604), Expect = 6.802e-62 Identity = 124/242 (51.24%), Postives = 166/242 (68.60%), Query Frame = 3 Query: 21 HISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTGHGIVMD 743 HI A I S D V+FL ++RCWQ+ C QM+MIR I L+LDRTYV Q + S+WDMGL+LFR ++ S +V++KT+ G+L +IERER GEA+DR+LL LL M + L IY +SFE+ FLE T+ YAAEG K MQ+ +VP+YL HV RL EE +R + YLD +T+K LIAT E+QLL H++AIL KG L+D +R +DL +Y LFSRV ++ L Q YI+ G IV++ Sbjct: 249 HIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVIN 490
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL4A_HUMAN (Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3) HSP 1 Score: 233.032 bits (593), Expect = 1.283e-60 Identity = 124/242 (51.24%), Postives = 162/242 (66.94%), Query Frame = 3 Query: 21 HISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTGHGIVMD 743 H+ A I S D V+FL + CWQD C QM+MIR I L+LDRTYV Q + S+WDMGL+LFR ++ S V+ KT+ G+L +IERER GEAVDR+LL LL M + L +Y +SFE FLE T+ YAAEG + MQ+ +VP+YL HV RL EE +R + YLD ST+KPLIA E+QLL H++AIL KG L+D +R DL +MY LFSRV ++L Q + YI+ G IV++ Sbjct: 113 HVQAQILPFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSTLPSIWDMGLELFRTHIISDKMVQSKTIDGILLLIERERSGEAVDRSLLRSLLGMLSDLQVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHSTQKPLIACVEKQLLGEHLTAILQKGLDHLLDENRVPDLAQMYQLFSRVRGGQQALLQHWSEYIKTFGTAIVIN 354
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL4A_MOUSE (Cullin-4A OS=Mus musculus GN=Cul4a PE=2 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 4.127e-59 Identity = 123/242 (50.83%), Postives = 159/242 (65.70%), Query Frame = 3 Query: 21 HISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTGHGIVMD 743 H+ A I S D V+FL + CWQD C QM+MIR I L+LDRTYV Q + S+WDMGL+LFR ++ S V+ KT+ G+L +I RER GEAVDR+LL LL M + L +Y +SFE FLE T+ YAAEG + MQ +VP+YL HV RL EE +R + YLD ST+KPLIA E+QLL H++AIL KG L+D +R DL +MY LFSRV +L Q + YI+ G IV++ Sbjct: 113 HVQAQILPFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRNHIISDRMVQSKTIDGILLLIGRERSGEAVDRSLLRSLLSMLSDLQVYKDSFELKFLEETNCLYAAEGQRLMQDREVPEYLNHVSKRLEEEADRVITYLDHSTQKPLIACVEKQLLGEHLTAILQKGLEHLLDENRVPDLTQMYQLFSRVKGGQHALLQHWSEYIKTFGTTIVIN 354
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL4_DICDI (Cullin-4 OS=Dictyostelium discoideum GN=culD PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.019e-49 Identity = 104/244 (42.62%), Postives = 160/244 (65.57%), Query Frame = 3 Query: 18 RHISAAIRSLV-GQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPN-VRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNALESLRQALAMYIRRTGHGIVMD 743 +HI+ I+ LV S D ++FL + W+D +QM+MIR I LYLDRTYV Q N V+S+WD+GL F LS S +E KT+ LL I ER G+ +DR L++ L+KM ++L IY++ FE F++ T+ FY EG + + + P YLK+V RL++E ER + YL+ ST+K L+A +RQL+ERH+ IL+KGF +++G R EDL ++Y L + V ++ ++++ YI++TG ++ D Sbjct: 121 KHITLTIKHLVLTMSSDPIIFLKSINSIWKDHTNQMIMIRSIFLYLDRTYVIQNSNTVKSIWDLGLFYFGNNLSQQSNLERKTIDSLLYSIRCEREGDEIDRDLIHSLVKMLSSLNIYTK-FEIEFIKETNRFYDMEGNSKINEIETPMYLKYVCERLNQEGERLMRYLEQSTKKQLMAVLDRQLIERHVDVILEKGFNAMVNGDRLEDLGKLYQLLNSVGEIKKIKESWQSYIKQTGIQMLND 363
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL3_DICDI (Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.603e-40 Identity = 97/251 (38.65%), Postives = 146/251 (58.17%), Query Frame = 3 Query: 18 RHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALGI-----YSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILD---KGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTGHGIVMD 743 +H+ A ++ V +S D L L W + MLMIR I +Y+DR YVKQ N+ S++D+GL LFR ++ S ++ + + LL M+++ER GE +DR L+ ++++M LG+ Y E FEKP L TS Y A+ +Q PDY+K VEI L EE ER YLD S+ L E+QL+ H+ ++D G ++ + EDL+RMY+LFSRV + L ++ ++ Y++ G GIVMD Sbjct: 79 KHLKAVAKT-VSESIDEKFLLEL-NSSWINHKTSMLMIRDILMYMDRNYVKQN-NLSSVFDLGLYLFRDNVAHCSTIKDRLLNTLLSMVQKEREGEVIDRILIKNIVQMLIDLGVNSKNVYIEDFEKPLLLKTSSHYQAQSQTLIQTCSCPDYMKKVEICLKEELERVSHYLDSSSEPKLKEVCEKQLISNHMRTLIDMENSGLISMLKDDKIEDLKRMYNLFSRVSDGLNLMKDVISSYVKEIGRGIVMD 326
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL3_XENTR (Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.380e-38 Identity = 86/232 (37.07%), Postives = 137/232 (59.05%), Query Frame = 3 Query: 75 FLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALG-----IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILD---KGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTGHGIVMD 743 FL + + W D M+MIR I +Y+DR YV+Q NV +++++GL +FR + Y + LL MI RER GE VDR + + +M LG +Y E FE PFLE ++EF+ E K++ ++ Y+K VE R++EE ER + LD ST +P++ ER+L+ +H+ I++ G ++ +TEDL MY LFSRV N L+++ + +++Y+R G +V + Sbjct: 101 FLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQN-NVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSLYLREQGKALVSE 331
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL3B_XENLA (Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.380e-38 Identity = 86/232 (37.07%), Postives = 137/232 (59.05%), Query Frame = 3 Query: 75 FLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALG-----IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILD---KGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTGHGIVMD 743 FL + + W D M+MIR I +Y+DR YV+Q NV +++++GL +FR + Y + LL MI RER GE VDR + + +M LG +Y E FE PFLE ++EF+ E K++ ++ Y+K VE R++EE ER + LD ST +P++ ER+L+ +H+ I++ G ++ +TEDL MY LFSRV N L+++ + +++Y+R G +V + Sbjct: 101 FLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQN-NVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSLYLREQGKALVSE 331
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL3A_XENLA (Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.380e-38 Identity = 86/232 (37.07%), Postives = 137/232 (59.05%), Query Frame = 3 Query: 75 FLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALG-----IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILD---KGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTGHGIVMD 743 FL + + W D M+MIR I +Y+DR YV+Q NV +++++GL +FR + Y + LL MI RER GE VDR + + +M LG +Y E FE PFLE ++EF+ E K++ ++ Y+K VE R++EE ER + LD ST +P++ ER+L+ +H+ I++ G ++ +TEDL MY LFSRV N L+++ + +++Y+R G +V + Sbjct: 101 FLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQN-NVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSLYLREQGKALVSE 331
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL3_MOUSE (Cullin-3 OS=Mus musculus GN=Cul3 PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.075e-38 Identity = 86/232 (37.07%), Postives = 136/232 (58.62%), Query Frame = 3 Query: 75 FLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALG-----IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILD---KGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTGHGIVMD 743 FL + + W D M+MIR I +Y+DR YV+Q NV +++++GL +FR + Y + LL MI RER GE VDR + + +M LG +Y E FE PFLE ++EF+ E K++ ++ Y+K VE R++EE ER + LD ST +P++ ER+L+ +H+ I++ G ++ +TEDL MY LFSRV N L+++ + ++ Y+R G +V + Sbjct: 101 FLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQN-NVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSCYLREQGKALVSE 331
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL3_HUMAN (Cullin-3 OS=Homo sapiens GN=CUL3 PE=1 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 4.016e-38 Identity = 86/232 (37.07%), Postives = 136/232 (58.62%), Query Frame = 3 Query: 75 FLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALG-----IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILD---KGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTGHGIVMD 743 FL + + W D M+MIR I +Y+DR YV+Q NV +++++GL +FR + Y + LL MI RER GE VDR + + +M LG +Y E FE PFLE ++EF+ E K++ ++ Y+K VE R++EE ER + LD ST +P++ ER+L+ +H+ I++ G ++ +TEDL MY LFSRV N L+++ + ++ Y+R G +V + Sbjct: 101 FLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQN-NVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLGCMYKLFSRVPNGLKTMCECMSSYLREQGKALVSE 331 The following BLAST results are available for this feature:
BLAST of CX295108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295108 ID=CX295108; Name=CX295108; organism=Citrus clementina; type=EST; length=743bpback to top |