CX295108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL6_CAEEL (Cullin-6 OS=Caenorhabditis elegans GN=cul-6 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.625e-16 Identity = 62/200 (31.00%), Postives = 98/200 (49.00%), Query Frame = 3 Query: 147 YLDRTYVKQ-----TPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTGH 728 YL+R +V + + ++ + L +++ + + KT+ +L +I ER G ++ T ++ +++ T L IY SFE FL+ T FY E + + V +Y+ VE RL +E R YL ST LI + E L+ + L F L++ + E L RMYSL RV + LE LR L I + GH Sbjct: 110 YLNRNFVSKKVEDKNGEIVEIYKLALDIWKAEF--FDNFKVKTIDAILELILLERCGSTINSTHISSVVECLTELDIYKVSFEPQFLDATKLFYKQEVLN--SKETVIEYMITVENRLFQEEYRSRRYLGPSTNDLLIDSCESILISDRLK-FLHSEFERLLEARKDEHLTRMYSLCRRVTHGLEDLRVYLEKRILKEGH 304
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL5_DICDI (Cullin-5 OS=Dictyostelium discoideum GN=culE PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.257e-15 Identity = 49/172 (28.49%), Postives = 92/172 (53.49%), Query Frame = 3 Query: 231 SSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALG-------IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNALESLRQALAMYIRRTG 725 ++++ +++K LL++I+ +R G + + +L+ L+ + LG IY FE+ FL+ T FY AE +++++ V +Y++HV R+ +E R Y+ +ST + L L+ + K +L++ ++ DL MYSL SRVN L L+ + +I+ G Sbjct: 142 TAFNPLKNKLSVSLLQIIKNDRTGFSTNLQVLSDSLECYVQLGPEKNKLEIYQSCFEQQFLQETETFYKAESADFIEKNGVCEYMRHVYNRIEQETNRVNQYMPISTLEKLTKILNNVLISNYKEQFASKFLDILIE-DKSSDLVMMYSLLSRVNHLTPLKNIFSDFIKSEG 312
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL4_SCHPO (Cullin-4 OS=Schizosaccharomyces pombe GN=cul4 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 49/221 (22.17%), Postives = 100/221 (45.25%), Query Frame = 3 Query: 81 SLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNALESLRQALAMYIRRTGHGIVMD 743 ++V CW +++ +++ I Y+D+T++ P+ ++ ++ L LFR+ L + ++ + LL+ E ++ D L + M +YS F +L S FY E + +Q+ + +YL++ L E + V +K + T +R L+ H+ L KG + ++ + +Y+L + E L Q + + G +V D Sbjct: 105 TVVVGCWNKWLERVEIVQNIFYYMDKTFLSHHPDYPTIEELSLSLFREKLMAVKNIQIPFLNSLLQSFENLHSSKSTDHAYLQDAMLMLHRTEMYSSVFVPMYLVMLSRFYDTESSQKIQELPLEEYLEYAMSSLEREDAYVEKFDIVRDKKSIRETVQRCLITSHLDT-LTKGISQFIEKRDAHSCKLLYALLQFNHETEYLIQPWSDCLVDVGFKLVND 324
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL5_MOUSE (Cullin-5 OS=Mus musculus GN=Cul5 PE=1 SV=3) HSP 1 Score: 74.7146 bits (182), Expect = 5.839e-13 Identity = 57/205 (27.80%), Postives = 103/205 (50.24%), Query Frame = 3 Query: 168 KQTPNVRSLWDMGLQLFRKYL------SSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFT--------ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDV----STRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTG 725 KQ+ N +S +M + RK + S +S ++++ ++++ ERLGEA D L+ + + + L IY ++FEK +L+ T FY + Y+QQ+ V +Y+K+ + +L EE +R L YL+ ++ + L+ L+ IL + M+ + TE L M+SL +V N +E + + L +I G Sbjct: 121 KQSSNKKS--NMEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMI-KRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAG 322
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL5_RABIT (Cullin-5 OS=Oryctolagus cuniculus GN=CUL5 PE=2 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13 Identity = 50/178 (28.09%), Postives = 91/178 (51.12%), Query Frame = 3 Query: 231 SSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFT--------ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDV----STRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTG 725 S +S ++++ ++++ ERLGEA D L+ + + + L IY ++FEK +L+ T FY + Y+QQ+ V +Y+K+ + +L EE +R L YL+ ++ + L+ L+ IL + M+ + TE L M+SL +V N +E + + L +I G Sbjct: 146 SIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMI-KRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAG 322
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL5_PONAB (Cullin-5 OS=Pongo abelii GN=CUL5 PE=2 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13 Identity = 50/178 (28.09%), Postives = 91/178 (51.12%), Query Frame = 3 Query: 231 SSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFT--------ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDV----STRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTG 725 S +S ++++ ++++ ERLGEA D L+ + + + L IY ++FEK +L+ T FY + Y+QQ+ V +Y+K+ + +L EE +R L YL+ ++ + L+ L+ IL + M+ + TE L M+SL +V N +E + + L +I G Sbjct: 146 SIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMI-KRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAG 322
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL5_HUMAN (Cullin-5 OS=Homo sapiens GN=CUL5 PE=1 SV=4) HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13 Identity = 50/178 (28.09%), Postives = 91/178 (51.12%), Query Frame = 3 Query: 231 SSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFT--------ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDV----STRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTG 725 S +S ++++ ++++ ERLGEA D L+ + + + L IY ++FEK +L+ T FY + Y+QQ+ V +Y+K+ + +L EE +R L YL+ ++ + L+ L+ IL + M+ + TE L M+SL +V N +E + + L +I G Sbjct: 146 SIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMI-KRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAG 322
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL5_RAT (Cullin-5 OS=Rattus norvegicus GN=Cul5 PE=1 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 2.898e-12 Identity = 56/205 (27.32%), Postives = 102/205 (49.76%), Query Frame = 3 Query: 168 KQTPNVRSLWDMGLQLFRKYL------SSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFT--------ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDV----STRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTG 725 KQ+ N +S +M + RK + S +S ++++ ++++ ERLGEA D L+ + + + L IY ++FEK +L+ T FY + Y+QQ+ V +Y+K+ + +L EE +R L YL+ ++ + L+ L+ IL + M+ + TE L M+SL +V +E + + L +I G Sbjct: 121 KQSSNKKS--NMEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMI-KRNETEKLHLMFSLMDKVPGGIEPMLKDLEEHIISAG 322
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CDC53_YEAST (Cell division control protein 53 OS=Saccharomyces cerevisiae GN=CDC53 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.432e-12 Identity = 52/233 (22.32%), Postives = 101/233 (43.35%), Query Frame = 3 Query: 75 FLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQ--TPNVRSLWDMGLQLFRKYLS-SYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALGI------------YSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSR-VNALESLRQALAMYIRRTG 725 FL + W+ + + Y++R +V++ + R ++D+ + + + + LL + R G+ + R+ ++ +K ALGI Y + FEKPFL+ T E+Y Y+++ V +Y+ + E + +Y D T+KPL + L+ HI L+ F +L+D E + +Y+L R + + Y+++TG Sbjct: 109 FLQFYVKRWKRFTIGAIFLNHAFDYMNRYWVQKERSDGKRHIFDVNTLCLMTWKEVMFDPSKDVLINELLDQVTLGREGQIIQRSNISTAIKSLVALGIDPQDLKKLNLNVYIQVFEKPFLKKTQEYYTQYTNDYLEKHSVTEYIFEAHEIIKREEKAMTIYWDDHTKKPLSMALNKVLITDHIEK-LENEFVVLLDARDIEKITSLYALIRRDFTLIPRMASVFENYVKKTG 340
BLAST of CX295108 vs. ExPASy Swiss-Prot
Match: CUL2_DICDI (Cullin-2 OS=Dictyostelium discoideum GN=culB PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.438e-11 Identity = 44/191 (23.04%), Postives = 93/191 (48.69%), Query Frame = 3 Query: 177 PNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALG-------IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTG 725 P+V + +GL ++++ L + +++ + + + +I+++R GE V ++ ++ L +Y +E +LE T +FY E + ++ S + Y+K E R+ EE +R YL+ S+ + L+E+H + + L D + +++ MY L SR+ L + + + YI+ G Sbjct: 127 PDVYEIQILGLMIWKERL--FFKIKDRVLKCVEILIQKDRDGELVQHQFISQFMESLIKLDSVDKDRTLYLIEYEASYLENTRQFYTRESVAFIASSGISSYMKKAETRIDEEEQRSQKYLNSSSHDKMRRLLHSILIEKHKELLQSECINYLKD-EKLDEIYNMYKLLSRIEGGLAPVLETVQKYIQHVG 314 The following BLAST results are available for this feature:
BLAST of CX295108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295108 ID=CX295108; Name=CX295108; organism=Citrus clementina; type=EST; length=743bpback to top |