CX295316

Overview
NameCX295316
Unique NameCX295316
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PAT12_SOLTU (Patatin-12 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.624e-28
Identity = 76/191 (39.79%), Postives = 118/191 (61.78%), Query Frame = 2
Query:   14 GKVRSFDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGA-PKTEVKYDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580
            G +  F+L+DGGVA   +P L++L+  T+ + +    + +I ++DY + L++SLGTG   + +  Y A +AAKWG L W+ +     +  +   +SS M D++IST F+A HS+N YLR+Q++ LTG    +D A++ N+E LV +GE LLKKPV+K + E          T +EAL R AK LS  K++R
Sbjct:  207 GDIYEFNLVDGGVATVGDPALLSLSVATR-LAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWMLA-----IRQMTNAASSYMADYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPE----------TYEEALKRFAKLLSDRKKLR 381          
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PT2K4_SOLTU (Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.039e-28
Identity = 76/186 (40.86%), Postives = 116/186 (62.37%), Query Frame = 2
Query:   29 FDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGA-PKTEVKYDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580
            F+L+DGGVA   +P L++L+  TK + +    + +I ++DY + L++SLGTG   + +  Y A + AKWG L W+ +     +  +   +SS MTD++IST F+A HS+N YLR+Q++ LTG    +D A++ N+E LV +GE LLKKPV+K + E          T +EAL R AK LS  K++R
Sbjct:  199 FNLVDGGVATVGDPALLSLSVATK-LAQVDPKFASIKSLDYKQMLLLSLGTGTNSEFDKTYTAQETAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPE----------TYEEALKRFAKLLSDRKKLR 368          
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PAT11_SOLTU (Patatin-11 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.888e-28
Identity = 76/191 (39.79%), Postives = 117/191 (61.26%), Query Frame = 2
Query:   14 GKVRSFDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGA-PKTEVKYDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580
            G    F+L+DGGVA   +P L++L+  T+ + +    + +I ++DY + L++SLGTG   + +  Y A +AAKWG L W+ +     +  +   +SS MTD++IST F+A HS+N YLR+Q++ L G    +D A++ N+E LV +GE LLKKPV+K + E          T +EAL R AK LS  K++R
Sbjct:  207 GATYEFNLVDGGVATVGDPALLSLSVATR-LAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALNGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPE----------TYEEALKRFAKLLSDRKKLR 381          
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PAT0_SOLTU (Patatin OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.888e-28
Identity = 76/191 (39.79%), Postives = 117/191 (61.26%), Query Frame = 2
Query:   14 GKVRSFDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGA-PKTEVKYDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580
            G    F+L+DG VA   +P L++L+  T+ + +    + +I ++DY + L++SLGTG   + +  Y A +AAKWG L W+ +     +  +   +SS MTD++IST F+A HS+N YLR+Q++ LTG    +D A++ N+E LV +GE LLKKPV+K + E          T +EAL R AK LS  K++R
Sbjct:  206 GATYEFNLVDGAVATVGDPALLSLSVATR-LAQDDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPE----------TYEEALKRFAKLLSDRKKLR 380          
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PAT04_SOLTU (Patatin-04/09 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.888e-28
Identity = 76/191 (39.79%), Postives = 117/191 (61.26%), Query Frame = 2
Query:   14 GKVRSFDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGA-PKTEVKYDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580
            G    F+L+DGGVA   +P L++L+  T+ + +    + +I ++DY + L++SLGTG   + +  Y A +AAKWG L W+ +     +  +   +SS MTD++IST F+A HS+N YLR+Q++ L G    +D A++ N+E LV +GE LLKKPV+K + E          T +EAL R AK LS  K++R
Sbjct:  206 GATYEFNLVDGGVATVGDPALLSLSVATR-LAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALNGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPE----------TYEEALKRFAKLLSDRKKLR 380          
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PT2K3_SOLTU (Patatin-2-Kuras 3 OS=Solanum tuberosum GN=pat2-k3 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.295e-27
Identity = 75/191 (39.27%), Postives = 118/191 (61.78%), Query Frame = 2
Query:   14 GKVRSFDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGA-PKTEVKYDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580
            G    F+L+DG VA   +P L++L+  TK + +    + +I +++Y + L++SLGTG   + +  Y A +AAKWG L W+ +     +  +   +SS MTD+++ST F+A HS+N YLR+Q++ LTG    +D A++ N+E LV +GE+LLKKPV+K + E          T +EAL R AK LS  K++R
Sbjct:  206 GDKYEFNLVDGAVATVGDPALLSLSVATK-LAQVDPKFASIKSLNYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWILA-----IQQMTNAASSYMTDYYLSTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGEKLLKKPVSKDSPE----------TYEEALKRFAKLLSDRKKLR 380          
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PT2K1_SOLTU (Patatin-2-Kuras 1 OS=Solanum tuberosum GN=pat2-k1 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.295e-27
Identity = 75/186 (40.32%), Postives = 116/186 (62.37%), Query Frame = 2
Query:   29 FDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGA-PKTEVKYDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580
            F+L+DG VA   +P L++L+  T+ + +    + +I ++DY + L++SLGTG   + +  Y A +AAKWG L WL +     +  +   +SS MTD+++ST F+A HS+N YLR+Q++ LTG    +D A++ N+E LV +GE LLKKPV+K + E          T +EAL R AK LS  K++R
Sbjct:  199 FNLVDGAVATVGDPALLSLSVATR-LAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWLLA-----IQQMTNAASSYMTDYYLSTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPE----------TYEEALKRFAKLLSDRKKLR 368          
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PT3K1_SOLTU (Patatin-3-Kuras 1 OS=Solanum tuberosum GN=pat3-k1 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.113e-27
Identity = 74/190 (38.95%), Postives = 116/190 (61.05%), Query Frame = 2
Query:   14 GKVRSFDLIDGGVAANNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGAPKTEVK-YDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580
            G    F+L+DG VAA +P+L++++  T+ + +    + +I +++Y + L++SLGTG      K Y A +AAKWG+L W+S     PL ++   +SS M D+++ST F+AL S+N YLR+Q++ LTG   + D A+  N+  LV +GE LLKK V++ N E          T + AL R AK LS  K++R
Sbjct:  195 GDQYDFNLVDGDVAAVDPSLLSISVATR-LAQEDPAFASIKSLNYKQMLLLSLGTGTNSEFAKNYTAEEAAKWGILQWMS-----PLWEMRSAASSYMNDYYLSTVFQALDSQNNYLRVQENALTGTATTFDDASVANMILLVQVGENLLKKSVSEDNHE----------TYEVALKRFAKLLSDRKKLR 368          
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PATB2_SOLTU (Patatin-B2 OS=Solanum tuberosum GN=PATB2 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.721e-27
Identity = 74/186 (39.78%), Postives = 115/186 (61.83%), Query Frame = 2
Query:   29 FDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGA-PKTEVKYDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580
            F+L+DG VA   +P L++L+  T+ + +    + +I ++DY + L++SLGTG   + +  Y A +AAKWG L W+ +     +  +   +SS MTD++IST F+A HS+N YLR+Q++ L G    +D A++ N+E LV +GE LLKKPV+K + E          T +EAL R AK LS  K++R
Sbjct:  211 FNLVDGAVATVGDPALLSLSVATR-LAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALNGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPE----------TYEEALKRFAKLLSDRKKLR 380          
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PAT07_SOLTU (Patatin-07 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.259e-25
Identity = 72/191 (37.70%), Postives = 112/191 (58.64%), Query Frame = 2
Query:   14 GKVRSFDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGA-PKTEVKYDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580
            G    F+L+DG VA   +P L++++  T+      + + +I +++Y + L++SLGTG   + +  + A + AKWG L W+       +  +   +SS MTD+++ST F+ LHS+N YLR+Q++ LTG     D A++ N+E LV +GE LLKKPV+K N E          T +EAL R AK LS  K+ R
Sbjct:  206 GDKYEFNLVDGAVATVADPALLSVSVATRRAEEDPA-FASIRSLNYKQLLLLSLGTGTNSEFDKTHTAQETAKWGALQWM-----LVIQQMTEAASSYMTDYYLSTVFQDLHSQNNYLRVQENALTGTTTKADDASEANMELLVQVGENLLKKPVSKDNPE----------TYEEALKRFAKLLSDRKKFR 380          
The following BLAST results are available for this feature:
BLAST of CX295316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
PAT12_SOLTU4.624e-2839.79Patatin-12 OS=Solanum tuberosum PE=2 SV=1[more]
PT2K4_SOLTU6.039e-2840.86Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 ... [more]
PAT11_SOLTU7.888e-2839.79Patatin-11 OS=Solanum tuberosum PE=2 SV=1[more]
PAT0_SOLTU7.888e-2839.79Patatin OS=Solanum tuberosum PE=3 SV=1[more]
PAT04_SOLTU7.888e-2839.79Patatin-04/09 OS=Solanum tuberosum PE=2 SV=1[more]
PT2K3_SOLTU2.295e-2739.27Patatin-2-Kuras 3 OS=Solanum tuberosum GN=pat2-k3 ... [more]
PT2K1_SOLTU2.295e-2740.32Patatin-2-Kuras 1 OS=Solanum tuberosum GN=pat2-k1 ... [more]
PT3K1_SOLTU5.113e-2738.95Patatin-3-Kuras 1 OS=Solanum tuberosum GN=pat3-k1 ... [more]
PATB2_SOLTU8.721e-2739.78Patatin-B2 OS=Solanum tuberosum GN=PATB2 PE=1 SV=1[more]
PAT07_SOLTU1.259e-2537.70Patatin-07 OS=Solanum tuberosum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05070H10SK PhIFruit1 Citrus clementina cDNA clone C05070H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295316 ID=CX295316; Name=CX295316; organism=Citrus clementina; type=EST; length=720bp
CAAAGATTGCACAGGAAAAGTGAGAAGTTTTGATCTCATTGACGGTGGCG
TTGCCGCTAACAATCCGACTCTAGTTGCTTTGAACGAGGTAACCAAAGAA
ATCAATCGGGGAAGTTCTGACTACTATGCAATCAACGCAATGGATTACAC
TCGGTTTCTGGTGATATCGTTAGGGACTGGTGCGCCAAAAACTGAAGTGA
AGTACGACGCCATTAAAGCAGCTAAGTGGGGTGTGTTGGGTTGGTTGTCG
AGTGAAAGTTCGACTCCATTGGTGGATGTGTTCATGCAATCAAGCAGCGA
CATGACGGACTTTCACATTTCCACTGCTTTTAAAGCCCTTCATTCTGAAA
ACGGTTATCTTCGCATCCAGGATGATACACTAACTGGAGACGAGGCTTCA
GTTGATGTTGCCACCAAAAAGAACCTCGAGAGTCTTGTGGGAATTGGTGA
AAGACTGCTGAAGAAACCAGTTACAAAGGTCAATTTCGAAACTGGACTAT
GTGAGCCTTGTGGTCAGGGTACTAATGACGAGGCTCTCATAAGACTAGCA
AAAGATCTTTCTAAGGAGAAGCGGATTCGTGACATGAGATCACCGCAAGG
AAAGGTTGCAAAAGCCACCAATTGAACAATATAAATCGCCCAGCACAAAG
GATTATATATTTTTTAATTCATTTAAATGTTGTTAATTGTAGTGTTATGT
GATAATTGACCAATTTGTCA
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