CX295316

Overview
NameCX295316
Unique NameCX295316
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PAT10_SOLTU (Patatin-10 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.134e-29
Identity = 77/191 (40.31%), Postives = 119/191 (62.30%), Query Frame = 2
Query:   14 GKVRSFDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGA-PKTEVKYDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580
            G +  F+L+DGGVA   +P L++L+  T+ + +    + +I ++DY + L++SLGTG   + +  Y A +AAKWG L W+ +     +  +   +SS MTD++IST F+A HS+N YLR+Q++ LTG    +D A++ N+E LV +GE LLKKPV+K + E          T +EAL R AK LS  K++R
Sbjct:  206 GDIYEFNLVDGGVATVGDPALLSLSVATR-LAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPE----------TYEEALKRFAKLLSNRKKLR 380          
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PATM3_SOLTU (Patatin group M-3 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.318e-29
Identity = 77/191 (40.31%), Postives = 119/191 (62.30%), Query Frame = 2
Query:   14 GKVRSFDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGA-PKTEVKYDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580
            G +  F+L+DGGVA   +P L++L+  T+ + +    + +I ++DY + L++SLGTG   + +  Y A +AAKWG L W+ +     +  +   +SS MTD++IST F+A HS+N YLR+Q++ LTG    +D A++ N+E LV +GE LLKKPV+K + E          T +EAL R AK LS  K++R
Sbjct:  206 GDIYEFNLVDGGVATVGDPALLSLSVATR-LAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPE----------TYEEALKRFAKLLSDRKKLR 380          
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PATM2_SOLTU (Patatin group M-2 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.318e-29
Identity = 77/191 (40.31%), Postives = 119/191 (62.30%), Query Frame = 2
Query:   14 GKVRSFDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGA-PKTEVKYDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580
            G +  F+L+DGGVA   +P L++L+  T+ + +    + +I ++DY + L++SLGTG   + +  Y A +AAKWG L W+ +     +  +   +SS MTD++IST F+A HS+N YLR+Q++ LTG    +D A++ N+E LV +GE LLKKPV+K + E          T +EAL R AK LS  K++R
Sbjct:  206 GDIYEFNLVDGGVATVGDPALLSLSVATR-LAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPE----------TYEEALKRFAKLLSDRKKLR 380          
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PATM1_SOLTU (Patatin group M-1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.318e-29
Identity = 77/191 (40.31%), Postives = 119/191 (62.30%), Query Frame = 2
Query:   14 GKVRSFDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGA-PKTEVKYDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580
            G +  F+L+DGGVA   +P L++L+  T+ + +    + +I ++DY + L++SLGTG   + +  Y A +AAKWG L W+ +     +  +   +SS MTD++IST F+A HS+N YLR+Q++ LTG    +D A++ N+E LV +GE LLKKPV+K + E          T +EAL R AK LS  K++R
Sbjct:  206 GDIYEFNLVDGGVATVGDPALLSLSVATR-LAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPE----------TYEEALKRFAKLLSDRKKLR 380          
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PAT14_SOLTU (Patatin-14 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.318e-29
Identity = 77/191 (40.31%), Postives = 119/191 (62.30%), Query Frame = 2
Query:   14 GKVRSFDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGA-PKTEVKYDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580
            G +  F+L+DGGVA   +P L++L+  T+ + +    + +I ++DY + L++SLGTG   + +  Y A +AAKWG L W+ +     +  +   +SS MTD++IST F+A HS+N YLR+Q++ LTG    +D A++ N+E LV +GE LLKKPV+K + E          T +EAL R AK LS  K++R
Sbjct:  206 GDIYEFNLVDGGVATVGDPALLSLSVATR-LAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPE----------TYEEALKRFAKLLSDRKKLR 380          
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PATJ1_SOLTU (Patatin group J-1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.589e-28
Identity = 77/191 (40.31%), Postives = 118/191 (61.78%), Query Frame = 2
Query:   14 GKVRSFDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGA-PKTEVKYDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580
            G    F+L+DGGVA   +P L++L+  T+ + +    + +I ++DY + L++SLGTG   + +  Y A +AAKWG L W+ +     +  +   +SS MTD++IST F+A HS+N YLR+Q++ LTG    +D A++ N+E LV +GE LLKKPV+K + E          T +EAL R AK LS  K++R
Sbjct:  207 GATYEFNLVDGGVATVGDPALLSLSVATR-LAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPE----------TYEEALKRFAKLLSNRKKLR 381          
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PATB1_SOLTU (Patatin-B1 OS=Solanum tuberosum GN=PATB1 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.589e-28
Identity = 77/191 (40.31%), Postives = 118/191 (61.78%), Query Frame = 2
Query:   14 GKVRSFDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGA-PKTEVKYDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580
            G    F+L+DGGVA   +P L++L+  T+ + +    + +I ++DY + L++SLGTG   + +  Y A +AAKWG L W+ +     +  +   +SS MTD++IST F+A HS+N YLR+Q++ LTG    +D A++ N+E LV +GE LLKKPV+K + E          T +EAL R AK LS  K++R
Sbjct:  206 GATYEFNLVDGGVATVGDPALLSLSVATR-LAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQLTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPE----------TYEEALKRFAKLLSNRKKLR 380          
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PAT06_SOLTU (Patatin-06 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.589e-28
Identity = 77/191 (40.31%), Postives = 118/191 (61.78%), Query Frame = 2
Query:   14 GKVRSFDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGA-PKTEVKYDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580
            G    F+L+DGGVA   +P L++L+  T+ + +    + +I ++DY + L++SLGTG   + +  Y A +AAKWG L W+ +     +  +   +SS MTD++IST F+A HS+N YLR+Q++ LTG    +D A++ N+E LV +GE LLKKPV+K + E          T +EAL R AK LS  K++R
Sbjct:  206 GATYEFNLVDGGVATVGDPALLSLSVATR-LAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPE----------TYEEALKRFAKLLSNRKKLR 380          
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PAT15_SOLTU (Patatin-15 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.076e-28
Identity = 77/191 (40.31%), Postives = 118/191 (61.78%), Query Frame = 2
Query:   14 GKVRSFDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGA-PKTEVKYDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580
            G    F+L+DGGVA   +P L++L+  T+ + +    + +I ++DY + L++SLGTG   + +  Y A +AAKWG L W+ +     +  +   +SS MTD++IST F+A HS+N YLR+Q++ LTG    +D A++ N+E LV +GE LLKKPV+K + E          T +EAL R AK LS  K++R
Sbjct:  206 GATYEFNLVDGGVATVGDPALLSLSVATR-LAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPE----------TYEEALKRFAKLLSDRKKLR 380          
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PT2K2_SOLTU (Patatin-2-Kuras 2 OS=Solanum tuberosum GN=pat2-k2 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.541e-28
Identity = 77/191 (40.31%), Postives = 118/191 (61.78%), Query Frame = 2
Query:   14 GKVRSFDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGA-PKTEVKYDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580
            G +  F+L+DG VA   +P L++L+  T+ + +    + +I ++DY + L++SLGTG   + +  Y A +AAKWG L WL +     +  +   +SS MTD++IST F+A HS+N YLR+Q++ LTG    +D A++ N+E LV +GE LLKKPV+K + E          T +EAL R AK LS  K++R
Sbjct:  206 GDIYEFNLVDGAVATVGDPALLSLSVATR-LAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWLLA-----IQQMTNAASSYMTDYYISTVFQAHHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPE----------TYEEALKRFAKLLSDRKKLR 380          
The following BLAST results are available for this feature:
BLAST of CX295316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
PAT10_SOLTU7.134e-2940.31Patatin-10 OS=Solanum tuberosum PE=2 SV=1[more]
PATM3_SOLTU9.318e-2940.31Patatin group M-3 OS=Solanum tuberosum PE=2 SV=1[more]
PATM2_SOLTU9.318e-2940.31Patatin group M-2 OS=Solanum tuberosum PE=2 SV=1[more]
PATM1_SOLTU9.318e-2940.31Patatin group M-1 OS=Solanum tuberosum PE=2 SV=1[more]
PAT14_SOLTU9.318e-2940.31Patatin-14 OS=Solanum tuberosum PE=2 SV=1[more]
PATJ1_SOLTU1.589e-2840.31Patatin group J-1 OS=Solanum tuberosum PE=2 SV=1[more]
PATB1_SOLTU1.589e-2840.31Patatin-B1 OS=Solanum tuberosum GN=PATB1 PE=2 SV=2[more]
PAT06_SOLTU1.589e-2840.31Patatin-06 OS=Solanum tuberosum PE=2 SV=1[more]
PAT15_SOLTU2.076e-2840.31Patatin-15 OS=Solanum tuberosum PE=2 SV=1[more]
PT2K2_SOLTU3.541e-2840.31Patatin-2-Kuras 2 OS=Solanum tuberosum GN=pat2-k2 ... [more]

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Properties
Property NameValue
Genbank descriptionC05070H10SK PhIFruit1 Citrus clementina cDNA clone C05070H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295316 ID=CX295316; Name=CX295316; organism=Citrus clementina; type=EST; length=720bp
CAAAGATTGCACAGGAAAAGTGAGAAGTTTTGATCTCATTGACGGTGGCG
TTGCCGCTAACAATCCGACTCTAGTTGCTTTGAACGAGGTAACCAAAGAA
ATCAATCGGGGAAGTTCTGACTACTATGCAATCAACGCAATGGATTACAC
TCGGTTTCTGGTGATATCGTTAGGGACTGGTGCGCCAAAAACTGAAGTGA
AGTACGACGCCATTAAAGCAGCTAAGTGGGGTGTGTTGGGTTGGTTGTCG
AGTGAAAGTTCGACTCCATTGGTGGATGTGTTCATGCAATCAAGCAGCGA
CATGACGGACTTTCACATTTCCACTGCTTTTAAAGCCCTTCATTCTGAAA
ACGGTTATCTTCGCATCCAGGATGATACACTAACTGGAGACGAGGCTTCA
GTTGATGTTGCCACCAAAAAGAACCTCGAGAGTCTTGTGGGAATTGGTGA
AAGACTGCTGAAGAAACCAGTTACAAAGGTCAATTTCGAAACTGGACTAT
GTGAGCCTTGTGGTCAGGGTACTAATGACGAGGCTCTCATAAGACTAGCA
AAAGATCTTTCTAAGGAGAAGCGGATTCGTGACATGAGATCACCGCAAGG
AAAGGTTGCAAAAGCCACCAATTGAACAATATAAATCGCCCAGCACAAAG
GATTATATATTTTTTAATTCATTTAAATGTTGTTAATTGTAGTGTTATGT
GATAATTGACCAATTTGTCA
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